Bosentan (hydrate)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0851248
NAMPT nicotinamide phosphoribosyltransferase 0.0537091
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0489227
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0434257
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0380062
ELL2 elongation factor, RNA polymerase II, 2 0.0324126
ARRDC3 arrestin domain containing 3 0.0304258
GOLGA4 golgin A4 0.0300064
OGA O-GlcNAcase 0.0297252
TOP2A topoisomerase (DNA) II alpha 170kDa 0.029375
LCORL ligand dependent nuclear receptor corepressor-like 0.0290121
ATP13A3 ATPase type 13A3 0.0287104
RB1CC1 RB1-inducible coiled-coil 1 0.0283805
ANLN anillin, actin binding protein 0.0269447
MATR3 matrin 3 0.0255906
ZNF292 zinc finger protein 292 0.024709
MXI1 MAX interactor 1, dimerization protein 0.0242699
CENPF centromere protein F, 350/400kDa 0.0240537
LAMP2 lysosomal-associated membrane protein 2 0.0239073
TSC22D2 TSC22 domain family, member 2 0.0234027
SPAG9 sperm associated antigen 9 0.0225811
MYH9 myosin, heavy chain 9, non-muscle 0.0222182
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0221833
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0218173
KDM3A lysine (K)-specific demethylase 3A 0.0214717
NT5C2 5'-nucleotidase, cytosolic II 0.0211316
SERINC1 serine incorporator 1 0.0207562
UGCG UDP-glucose ceramide glucosyltransferase 0.0206921
DIAPH3 diaphanous-related formin 3 0.0200822
MKI67 marker of proliferation Ki-67 0.019963
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0199548
BCLAF1 BCL2-associated transcription factor 1 0.0190535
CKAP5 cytoskeleton associated protein 5 0.018542
XPO1 exportin 1 0.0179472
TFG TRK-fused gene 0.0178628
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.017038
NUP58 nucleoporin 58 0.0163912
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0159107
TPX2 TPX2, microtubule-associated 0.0158118
RLF rearranged L-myc fusion 0.015732
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0154791
NEK7 NIMA-related kinase 7 0.0154519
YBX1 Y box binding protein 1 0.0154405
UBQLN1 ubiquilin 1 0.0150823
ADAM17 ADAM metallopeptidase domain 17 0.0148488
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0147854
MIS18BP1 MIS18 binding protein 1 0.0147297
USP37 ubiquitin specific peptidase 37 0.0146406
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0146382
NUP153 nucleoporin 153kDa 0.0145305
DSTN destrin (actin depolymerizing factor) 0.0144966
USP3 ubiquitin specific peptidase 3 0.014448
MARCHF6 membrane associated ring-CH-type finger 6 0.0143961
ARL5B ADP-ribosylation factor-like 5B 0.0143775
HELZ helicase with zinc finger 0.0143745
SUCO SUN domain containing ossification factor 0.0143029
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0141691
KDM6A lysine (K)-specific demethylase 6A 0.014158
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0141324
UBA6 ubiquitin-like modifier activating enzyme 6 0.014098
FUBP1 far upstream element (FUSE) binding protein 1 0.013996
SDC4 syndecan 4 0.0139276
NONO non-POU domain containing, octamer-binding 0.0138947
SET SET nuclear proto-oncogene 0.0138113
CSDE1 cold shock domain containing E1, RNA-binding 0.0138047
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0135312
ABI1 abl-interactor 1 0.0134871
WDR43 WD repeat domain 43 0.0134465
WTAP Wilms tumor 1 associated protein 0.0134359
RSRC2 arginine/serine-rich coiled-coil 2 0.0134058
ECT2 epithelial cell transforming 2 0.013391
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0133561
GARS1 glycyl-tRNA synthetase 1 0.0133338
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0132677
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0132511
SRGN serglycin 0.0132477
TPM3 tropomyosin 3 0.0131939
KIF4A kinesin family member 4A 0.0130729
HMGB2 high mobility group box 2 0.0130522
IPO7 importin 7 0.0130465
PHIP pleckstrin homology domain interacting protein 0.0129066
UVRAG UV radiation resistance associated 0.0127243
CCNL1 cyclin L1 0.012682
ANXA5 annexin A5 0.0126338
RNF145 ring finger protein 145 0.01251
ZFR zinc finger RNA binding protein 0.0123364
RAD21 RAD21 homolog (S. pombe) 0.0123182
TMF1 TATA element modulatory factor 1 0.011995
TENT2 terminal nucleotidyltransferase 2 0.0119524
DENND4C DENN/MADD domain containing 4C 0.0118548
WDFY1 WD repeat and FYVE domain containing 1 0.0118052
TTK TTK protein kinase 0.0118012
GAS2L3 growth arrest-specific 2 like 3 0.0117641
ZC3H15 zinc finger CCCH-type containing 15 0.0116711
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 0.011633
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0115528
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0114954
TRA2A transformer 2 alpha homolog (Drosophila) 0.0113548
EZR ezrin 0.0111871
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0111361

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.190479
FRMD4A FERM domain containing 4A -0.16042
GLIS3 GLIS family zinc finger 3 -0.146306
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.139461
COL6A3 collagen, type VI, alpha 3 -0.118941
AKAP12 A kinase (PRKA) anchor protein 12 -0.114771
IGFBP3 insulin-like growth factor binding protein 3 -0.114226
CD44 CD44 molecule (Indian blood group) -0.10554
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.10162
HMGA2 high mobility group AT-hook 2 -0.0925719
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0886618
HDAC9 histone deacetylase 9 -0.0850434
NDRG1 N-myc downstream regulated 1 -0.0849156
HLA-B major histocompatibility complex, class I, B -0.0826477
TRIO trio Rho guanine nucleotide exchange factor -0.0814925
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0806132
VCL vinculin -0.0793898
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0791683
EXT1 exostosin glycosyltransferase 1 -0.0785067
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0778858
TMSB10 thymosin beta 10 -0.0719806
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0700551
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.068916
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.064877
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0638771
PDE10A phosphodiesterase 10A -0.0633888
FTL ferritin, light polypeptide -0.0633735
TNS3 tensin 3 -0.0632749
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0605105
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0604104
VEGFA vascular endothelial growth factor A -0.0595362
CDH13 cadherin 13 -0.0584859
ZMYND8 zinc finger, MYND-type containing 8 -0.0568653
FTH1 ferritin, heavy polypeptide 1 -0.0563383
NAV1 neuron navigator 1 -0.0554927
DST dystonin -0.0550313
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0542824
BICC1 BicC family RNA binding protein 1 -0.0534789
ATXN1 ataxin 1 -0.0522296
RNF213 ring finger protein 213 -0.0512902
INTS6 integrator complex subunit 6 -0.0511845
KYNU kynureninase -0.0486229
RAI14 retinoic acid induced 14 -0.0481666
PTPRK protein tyrosine phosphatase, receptor type, K -0.0481459
NABP1 nucleic acid binding protein 1 -0.0481374
DIAPH2 diaphanous-related formin 2 -0.0481236
SDK1 sidekick cell adhesion molecule 1 -0.0475916
C3 complement component 3 -0.0462523
EGFR epidermal growth factor receptor -0.0456436
IER3 immediate early response 3 -0.0453331
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0431886
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0425179
VCAN versican -0.042242
COL5A1 collagen, type V, alpha 1 -0.0422045
RAD51B RAD51 paralog B -0.0421305
FNDC3B fibronectin type III domain containing 3B -0.0418976
TGFBI transforming growth factor, beta-induced, 68kDa -0.0409497
HLA-A major histocompatibility complex, class I, A -0.0399166
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0396506
ASPH aspartate beta-hydroxylase -0.0392838
ADAM12 ADAM metallopeptidase domain 12 -0.0388131
MT2A metallothionein 2A -0.0387029
SMAD3 SMAD family member 3 -0.0385397
ZBTB38 zinc finger and BTB domain containing 38 -0.0383706
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0380286
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0378736
SLC35F3 solute carrier family 35, member F3 -0.0378293
SEPTIN9 septin 9 -0.0374691
EFNA5 ephrin-A5 -0.0370893
ZBTB20 zinc finger and BTB domain containing 20 -0.03686
EGR1 early growth response 1 -0.0367425
GPC6 glypican 6 -0.0365628
FRMPD4 FERM and PDZ domain containing 4 -0.0363423
MACF1 microtubule-actin crosslinking factor 1 -0.036036
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0360312
SLC38A2 solute carrier family 38, member 2 -0.0358558
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0353381
TMEM132D transmembrane protein 132D -0.0351667
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0349775
SMYD3 SET and MYND domain containing 3 -0.0349023
ZHX2 zinc fingers and homeoboxes 2 -0.0348928
MAML2 mastermind-like 2 (Drosophila) -0.0348192
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0345237
RUNX1 runt-related transcription factor 1 -0.0344131
SQSTM1 sequestosome 1 -0.0338794
RIGI RNA sensor RIG-I -0.0337407
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0330897
EPAS1 endothelial PAS domain protein 1 -0.0329879
FAM20C family with sequence similarity 20, member C -0.0329787
RND3 Rho family GTPase 3 -0.0328131
AFF3 AF4/FMR2 family, member 3 -0.0326002
RAB7A RAB7A, member RAS oncogene family -0.0321846
PPARD peroxisome proliferator-activated receptor delta -0.0319798
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0318479
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.031745
CTSD cathepsin D -0.0313423
FBXL7 F-box and leucine-rich repeat protein 7 -0.0312922
MYOF myoferlin -0.0312346
SOX5 SRY (sex determining region Y)-box 5 -0.0311869
FLNB filamin B, beta -0.0309102