Bosentan (hydrate)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.14977
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.097406
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0780964
CDH13 cadherin 13 0.0723943
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0644265
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0613412
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0569343
NAV2 neuron navigator 2 0.0531266
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0498074
PGK1 phosphoglycerate kinase 1 0.0487387
CANX calnexin 0.0444072
KRT18 keratin 18, type I 0.0431235
ERRFI1 ERBB receptor feedback inhibitor 1 0.0416949
ENO1 enolase 1, (alpha) 0.0405818
ASPH aspartate beta-hydroxylase 0.0396237
FRMD5 FERM domain containing 5 0.0350297
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0346699
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0322011
ANO1 anoctamin 1, calcium activated chloride channel 0.031703
PTMA prothymosin, alpha 0.0311332
LDHA lactate dehydrogenase A 0.0311204
KDM3A lysine (K)-specific demethylase 3A 0.0308855
LARS1 leucyl-tRNA synthetase 1 0.0306795
RPS3 ribosomal protein S3 0.030482
SDK1 sidekick cell adhesion molecule 1 0.0295879
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.028141
AFDN afadin, adherens junction formation factor 0.0258764
OGA O-GlcNAcase 0.0258413
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0250809
TFRC transferrin receptor 0.0250383
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0244023
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0243299
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0242922
KIZ kizuna centrosomal protein 0.0240968
ANKRD10 ankyrin repeat domain 10 0.0235167
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0234482
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0231264
AHNAK AHNAK nucleoprotein 0.0230082
CDK6 cyclin-dependent kinase 6 0.0224081
SERINC1 serine incorporator 1 0.0221542
PRRC2C proline-rich coiled-coil 2C 0.022012
FMNL2 formin-like 2 0.0218714
TMF1 TATA element modulatory factor 1 0.0213402
SUN1 Sad1 and UNC84 domain containing 1 0.0211308
MRPS6 mitochondrial ribosomal protein S6 0.0209905
ZFAND3 zinc finger, AN1-type domain 3 0.0209813
CSDE1 cold shock domain containing E1, RNA-binding 0.0209739
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0205107
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.01994
TES testin LIM domain protein 0.0198768
ARGLU1 arginine and glutamate rich 1 0.0197293
RSL1D1 ribosomal L1 domain containing 1 0.0197211
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0196984
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0196547
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0192517
ZEB1 zinc finger E-box binding homeobox 1 0.0189516
INSIG2 insulin induced gene 2 0.0186996
TRIM56 tripartite motif containing 56 0.0184127
BACE2 beta-site APP-cleaving enzyme 2 0.0177422
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 0.0175287
ARHGAP32 Rho GTPase activating protein 32 0.01749
ANKRD36 ankyrin repeat domain 36 0.01748
LRMDA leucine rich melanocyte differentiation associated 0.0173674
OSBPL8 oxysterol binding protein-like 8 0.0172081
TMSB4X thymosin beta 4, X-linked 0.0166321
PDIA4 protein disulfide isomerase family A, member 4 0.0166219
EPCAM epithelial cell adhesion molecule 0.0165905
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0161987
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0160208
SPAG9 sperm associated antigen 9 0.0158395
TMEM163 transmembrane protein 163 0.0158355
HSPA8 heat shock 70kDa protein 8 0.0158327
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0157427
MXI1 MAX interactor 1, dimerization protein 0.0156165
KCNIP4 Kv channel interacting protein 4 0.0156102
MIMS1 mitochondrial inner membrane scaffold 1 0.0154874
CHD4 chromodomain helicase DNA binding protein 4 0.0154029
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0149634
CALR calreticulin 0.0149141
CDHR3 cadherin-related family member 3 0.0147724
BRWD3 bromodomain and WD repeat domain containing 3 0.0146898
GRB10 growth factor receptor-bound protein 10 0.0146795
NONO non-POU domain containing, octamer-binding 0.014661
PRELID2 PRELI domain containing 2 0.0142681
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0142254
STX16 syntaxin 16 0.0142065
RANBP2 RAN binding protein 2 0.0141774
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0141204
RPS27A ribosomal protein S27a 0.0140921
MYOF myoferlin 0.0140783
LCORL ligand dependent nuclear receptor corepressor-like 0.0140135
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0138165
PSD3 pleckstrin and Sec7 domain containing 3 0.0137757
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0136464
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0135821
HELZ helicase with zinc finger 0.0135685
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0135148
NCOR1 nuclear receptor corepressor 1 0.0134534
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0133339
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0133255

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.31888
NKD1 naked cuticle homolog 1 (Drosophila) -0.171588
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.130158
TNS3 tensin 3 -0.120466
EGR1 early growth response 1 -0.0963885
ACTN4 actinin, alpha 4 -0.0896913
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0884789
EZR ezrin -0.0870764
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.083182
RUNX1 runt-related transcription factor 1 -0.0806269
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0752216
ACTG1 actin gamma 1 -0.07217
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0664894
HDAC4 histone deacetylase 4 -0.0659147
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0646196
HMGA1 high mobility group AT-hook 1 -0.0634258
EFNB2 ephrin-B2 -0.0606621
AOPEP aminopeptidase O (putative) -0.0589047
BCL2L1 BCL2-like 1 -0.0586092
PKM pyruvate kinase, muscle -0.0582158
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0577815
ANXA2 annexin A2 -0.0570564
RPS6 ribosomal protein S6 -0.0549345
RPL35A ribosomal protein L35a -0.0533749
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0528379
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0522801
NCEH1 neutral cholesterol ester hydrolase 1 -0.0498769
ATXN1 ataxin 1 -0.0497512
PCBP2 poly(rC) binding protein 2 -0.0494236
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0489904
PROX1 prospero homeobox 1 -0.0483554
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0483444
EEF2 eukaryotic translation elongation factor 2 -0.0461238
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0434566
LMO7 LIM domain 7 -0.0431645
LOC102724023 ES1 protein homolog, mitochondrial -0.0421016
ABHD2 abhydrolase domain containing 2 -0.041896
POTEF POTE ankyrin domain family, member F -0.0418618
SVIL supervillin -0.0417644
WNK1 WNK lysine deficient protein kinase 1 -0.041438
RNF43 ring finger protein 43 -0.0411297
MED13 mediator complex subunit 13 -0.0411087
RPLP1 ribosomal protein, large, P1 -0.0407836
BMP5 bone morphogenetic protein 5 -0.0407752
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor -0.0405482
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0398698
RASSF6 Ras association (RalGDS/AF-6) domain family member 6 -0.0391583
ZNRF3 zinc and ring finger 3 -0.0391083
PFN1 profilin 1 -0.0389256
VCL vinculin -0.0388566
EEF1G eukaryotic translation elongation factor 1 gamma -0.0385238
LOC112694756 uncharaterized LOC112694756 -0.0382891
OXR1 oxidation resistance 1 -0.0382302
TNS4 tensin 4 -0.0380543
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0376824
JMJD1C jumonji domain containing 1C -0.0368267
CD46 CD46 molecule, complement regulatory protein -0.0366613
BRD2 bromodomain containing 2 -0.0363569
CEMIP2 cell migration inducing hyaluronidase 2 -0.0362234
P4HB prolyl 4-hydroxylase, beta polypeptide -0.035491
AKAP9 A kinase (PRKA) anchor protein 9 -0.0351438
SMC4 structural maintenance of chromosomes 4 -0.0351188
RAB7A RAB7A, member RAS oncogene family -0.0344721
FTH1 ferritin, heavy polypeptide 1 -0.0340518
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0339956
IGBP1 immunoglobulin (CD79A) binding protein 1 -0.0330235
RPL28 ribosomal protein L28 -0.0328781
ETNK1 ethanolamine kinase 1 -0.0321736
DSCAM Down syndrome cell adhesion molecule -0.0317703
YBX1 Y box binding protein 1 -0.0317326
FOXP1 forkhead box P1 -0.0316869
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0314583
ATP5F1B ATP synthase F1 subunit beta -0.0314358
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0312293
RTN4 reticulon 4 -0.0309929
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0298429
DCAF7 DDB1 and CUL4 associated factor 7 -0.029791
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0296593
FLNA filamin A, alpha -0.0296436
SF3B3 splicing factor 3b, subunit 3, 130kDa -0.0295443
TRA2B transformer 2 beta homolog (Drosophila) -0.0295429
ETV5 ets variant 5 -0.0294985
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0294812
IRS2 insulin receptor substrate 2 -0.0292161
CLTC clathrin, heavy chain (Hc) -0.0291247
CENPF centromere protein F, 350/400kDa -0.0290123
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0285457
RFWD3 ring finger and WD repeat domain 3 -0.0280883
ECT2 epithelial cell transforming 2 -0.0279213
FOSL1 FOS-like antigen 1 -0.0275221
RPS8 ribosomal protein S8 -0.0273911
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0271746
WASF2 WAS protein family, member 2 -0.0270984
LRP6 low density lipoprotein receptor-related protein 6 -0.0269471
EPHA2 EPH receptor A2 -0.0267573
RAB22A RAB22A, member RAS oncogene family -0.026583
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0265787
LRP5 low density lipoprotein receptor-related protein 5 -0.0261921
TNRC18 trinucleotide repeat containing 18 -0.0255076
CMIP c-Maf inducing protein -0.0254294