Brain Lower Grade Glioma_LGG_TCGA-DB-A4XA-01A-11R-A26U-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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124 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XA-01A-11R-A26U-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAT2 acetyl-CoA acetyltransferase 2
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene
ARHGEF15 Rho guanine nucleotide exchange factor (GEF) 15
ART1 ADP-ribosyltransferase 1
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
BOP1 block of proliferation 1
BPIFA1 BPI fold containing family A, member 1
C1QTNF9 C1q and tumor necrosis factor related protein 9
C5ORF47 chromosome 5 open reading frame 47
CA5A carbonic anhydrase VA, mitochondrial
CCDC27 coiled-coil domain containing 27
CCM2L cerebral cavernous malformation 2-like
CD163L1 CD163 molecule-like 1
CDRT15 CMT1A duplicated region transcript 15
CETP cholesteryl ester transfer protein, plasma
CLCN7 chloride channel, voltage-sensitive 7
CRLS1 cardiolipin synthase 1
CT45A4 cancer/testis antigen family 45, member A4
DEGS2 delta(4)-desaturase, sphingolipid 2
DNAH14 dynein, axonemal, heavy chain 14
DNASE1L3 deoxyribonuclease I-like 3
DNLZ DNL-type zinc finger
DYNAP dynactin associated protein
EBP emopamil binding protein (sterol isomerase)
FAHD2A fumarylacetoacetate hydrolase domain containing 2A
FAM110D family with sequence similarity 110, member D
FAM219A family with sequence similarity 219, member A
FAM224B family with sequence similarity 224, member B (non-protein coding)
FASN fatty acid synthase
FGF21 fibroblast growth factor 21
FGFBP3 fibroblast growth factor binding protein 3
FOXF2 forkhead box F2
FOXL2 forkhead box L2
FOXL2NB FOXL2 neighbor
FOXQ1 forkhead box Q1
GAL3ST1 galactose-3-O-sulfotransferase 1
GALR3 galanin receptor 3
GLIS2 GLIS family zinc finger 2
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPER1 G protein-coupled estrogen receptor 1
HEATR9 HEAT repeat containing 9
HIST1H2AC histone cluster 1, H2ac
IL36RN interleukin 36 receptor antagonist
IL9 interleukin 9
ITGAD integrin, alpha D
JPH2 junctophilin 2
KANK3 KN motif and ankyrin repeat domains 3
KCNK18 potassium channel, two pore domain subfamily K, member 18
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
KRT36 keratin 36, type I
KRT37 keratin 37, type I
KRT39 keratin 39, type I
KRT71 keratin 71, type II
LHX3 LIM homeobox 3
LILRB5 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
LINC00518 long intergenic non-protein coding RNA 518
LOC115110 uncharacterized LOC115110
LOC284788 uncharacterized LOC284788
LOC644936 actin, beta pseudogene
MPC1 mitochondrial pyruvate carrier 1
MT1G metallothionein 1G
MT4 metallothionein 4
MVD mevalonate (diphospho) decarboxylase
MYH4 myosin, heavy chain 4, skeletal muscle
MYLK2 myosin light chain kinase 2
NKX2-8 NK2 homeobox 8
NKX6-3 NK6 homeobox 3
NMRK2 nicotinamide riboside kinase 2
NOTUM notum pectinacetylesterase homolog (Drosophila)
NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae)
NUTM2A NUT family member 2A
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OR13C5 olfactory receptor, family 13, subfamily C, member 5
OR2A5 olfactory receptor, family 2, subfamily A, member 5
OR2L2 olfactory receptor, family 2, subfamily L, member 2
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2T34 olfactory receptor, family 2, subfamily T, member 34
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR5H6 olfactory receptor, family 5, subfamily H, member 6 (gene/pseudogene)
OTOA otoancorin
PEX7 peroxisomal biogenesis factor 7
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
POMC proopiomelanocortin
PRR22 proline rich 22
PTGDS prostaglandin D2 synthase 21kDa (brain)
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
PWP2 PWP2 periodic tryptophan protein homolog (yeast)
RND2 Rho family GTPase 2
SCARB1 scavenger receptor class B, member 1
SCLY selenocysteine lyase
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SOX7 SRY (sex determining region Y)-box 7
SPAG11B sperm associated antigen 11B
SPO11 SPO11 meiotic protein covalently bound to DSB
TARP TCR gamma alternate reading frame protein
TEX36 testis expressed 36
THEM6 thioesterase superfamily member 6
THRSP thyroid hormone responsive
TKT transketolase
TMEM211 transmembrane protein 211
TMEM38B transmembrane protein 38B
TMEM88 transmembrane protein 88
TMEM97 transmembrane protein 97
TTTY6B testis-specific transcript, Y-linked 6B (non-protein coding)
ULK4P2 ULK4 pseudogene 2
USP17L2 ubiquitin specific peptidase 17-like family member 2
VAC14 Vac14 homolog (S. cerevisiae)
VAX2 ventral anterior homeobox 2
VILL villin-like
XKR3 XK, Kell blood group complex subunit-related family, member 3
ZFAT-AS1 ZFAT antisense RNA 1
ZIM3 zinc finger, imprinted 3
ZNF385A zinc finger protein 385A
ZSCAN10 zinc finger and SCAN domain containing 10

low expression

Symbol Name
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit
FAM127C family with sequence similarity 127, member C
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
ZNF565 zinc finger protein 565