Brain Lower Grade Glioma_LGG_TCGA-DU-8167-01A-11R-2256-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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162 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-8167-01A-11R-2256-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABHD6 abhydrolase domain containing 6
ABLIM3 actin binding LIM protein family, member 3
ACTL7B actin-like 7B
ANGPTL3 angiopoietin-like 3
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
AQP7 aquaporin 7
BIN1 bridging integrator 1
BLID BH3-like motif containing, cell death inducer
BLNK B-cell linker
BSPH1 binder of sperm protein homolog 1
C12ORF75 chromosome 12 open reading frame 75
C18ORF21 chromosome 18 open reading frame 21
CCDC146 coiled-coil domain containing 146
CCL2 chemokine (C-C motif) ligand 2
CCL3 chemokine (C-C motif) ligand 3
CCL3L1 chemokine (C-C motif) ligand 3-like 1
CCL3L3 chemokine (C-C motif) ligand 3-like 3
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CCL8 chemokine (C-C motif) ligand 8
CD14 CD14 molecule
CD36 CD36 molecule (thrombospondin receptor)
CD83 CD83 molecule
CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21
CFL2 cofilin 2 (muscle)
CH25H cholesterol 25-hydroxylase
CNGA1 cyclic nucleotide gated channel alpha 1
CRIPT cysteine-rich PDZ-binding protein
CXORF21 chromosome X open reading frame 21
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DIO1 deiodinase, iodothyronine, type I
DLL1 delta-like 1 (Drosophila)
DPRX divergent-paired related homeobox
DUSP27 dual specificity phosphatase 27 (putative)
EBI3 Epstein-Barr virus induced 3
EEF1A1P9 eukaryotic translation elongation factor 1 alpha 1 pseudogene 9
EGR2 early growth response 2
EGR3 early growth response 3
EIF3E eukaryotic translation initiation factor 3, subunit E
EVI2A ecotropic viral integration site 2A
EXOSC5 exosome component 5
FABP9 fatty acid binding protein 9, testis
FAM138B family with sequence similarity 138, member B
FAM151A family with sequence similarity 151, member A
FAM170B family with sequence similarity 170, member B
FAM21A family with sequence similarity 21, member A
FAM49B family with sequence similarity 49, member B
FCAR Fc fragment of IgA receptor
FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64)
FCGR1C Fc fragment of IgG, high affinity Ic, receptor (CD64), pseudogene
FFAR3 free fatty acid receptor 3
FLVCR1-AS1 FLVCR1 antisense RNA 1 (head to head)
FOLR2 folate receptor 2 (fetal)
FXYD4 FXYD domain containing ion transport regulator 4
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GHRL ghrelin/obestatin prepropeptide
GLTSCR2 glioma tumor suppressor candidate region gene 2
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GOLGA6D golgin A6 family, member D
GP9 glycoprotein IX (platelet)
GPN3 GPN-loop GTPase 3
GPR160 G protein-coupled receptor 160
GSC2 goosecoid homeobox 2
HACL1 2-hydroxyacyl-CoA lyase 1
HHEX hematopoietically expressed homeobox
HIST1H3E histone cluster 1, H3e
HMGB4 high mobility group box 4
HPGDS hematopoietic prostaglandin D synthase
HPSE heparanase
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
IER3 immediate early response 3
IFITM4P interferon induced transmembrane protein 4 pseudogene
IL1A interleukin 1, alpha
IL1B interleukin 1, beta
IL20 interleukin 20
IL24 interleukin 24
KCNK6 potassium channel, two pore domain subfamily K, member 6
KCNQ1 potassium channel, voltage gated KQT-like subfamily Q, member 1
KCNRG potassium channel regulator
KRT77 keratin 77, type II
KRTAP5-6 keratin associated protein 5-6
LCE2D late cornified envelope 2D
LINC01011 long intergenic non-protein coding RNA 1011
LINC01600 long intergenic non-protein coding RNA 1600
LOC389033 placenta-specific 9 pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEA11 melanoma antigen family A11
MDFI MyoD family inhibitor
MDS2 myelodysplastic syndrome 2 translocation associated
MKNK1 MAP kinase interacting serine/threonine kinase 1
MLH3 mutL homolog 3
MS4A10 membrane-spanning 4-domains, subfamily A, member 10
MS4A6E membrane-spanning 4-domains, subfamily A, member 6E
MTURN maturin, neural progenitor differentiation regulator homolog (Xenopus)
MYF5 myogenic factor 5
MYOZ2 myozenin 2
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NOP56 NOP56 ribonucleoprotein
NRROS negative regulator of reactive oxygen species
OIT3 oncoprotein induced transcript 3
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR10H1 olfactory receptor, family 10, subfamily H, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OSM oncostatin M
OTUD1 OTU deubiquitinase 1
PCDH12 protocadherin 12
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2
PGLYRP4 peptidoglycan recognition protein 4
PLA2G2C phospholipase A2, group IIC
POU1F1 POU class 1 homeobox 1
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PPP2R3C protein phosphatase 2, regulatory subunit B'', gamma
PRDM14 PR domain containing 14
RASGEF1B RasGEF domain family, member 1B
RBMXL3 RNA binding motif protein, X-linked-like 3
RGS10 regulator of G-protein signaling 10
RPL13A ribosomal protein L13a
RTP2 receptor (chemosensory) transporter protein 2
SENP6 SUMO1/sentrin specific peptidase 6
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SFXN2 sideroflexin 2
SLC22A16 solute carrier family 22 (organic cation/carnitine transporter), member 16
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SPATA5L1 spermatogenesis associated 5-like 1
TAL1 T-cell acute lymphocytic leukemia 1
TAS2R40 taste receptor, type 2, member 40
TCP10L2 t-complex 10-like 2
TMC8 transmembrane channel-like 8
TNF tumor necrosis factor
TNFAIP8L2 tumor necrosis factor, alpha-induced protein 8-like 2
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18
TNP1 transition protein 1 (during histone to protamine replacement)
TPRX1 tetra-peptide repeat homeobox 1
TRAPPC3L trafficking protein particle complex 3-like
TRIM42 tripartite motif containing 42
TRIM59 tripartite motif containing 59
TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene
TSKS testis-specific serine kinase substrate
TSPAN8 tetraspanin 8
UBA2 ubiquitin-like modifier activating enzyme 2
UBE2D2 ubiquitin-conjugating enzyme E2D 2
UCA1 urothelial cancer associated 1 (non-protein coding)
UCMA upper zone of growth plate and cartilage matrix associated
UCP2 uncoupling protein 2 (mitochondrial, proton carrier)
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
ZDHHC19 zinc finger, DHHC-type containing 19
ZFPM2 zinc finger protein, FOG family member 2
ZHX1 zinc fingers and homeoboxes 1
ZNF146 zinc finger protein 146
ZNF232 zinc finger protein 232

low expression

Symbol Name
CUL3 cullin 3
SMIM15 small integral membrane protein 15
TMEM185A transmembrane protein 185A
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase