Brain Lower Grade Glioma_LGG_TCGA-FG-8185-01A-11R-2256-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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387 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-8185-01A-11R-2256-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC6P2 ATP-binding cassette, sub-family C, member 6 pseudogene 2
ABI1 abl-interactor 1
ACTL9 actin-like 9
ADA adenosine deaminase
ADD1 adducin 1 (alpha)
ADIPOR2 adiponectin receptor 2
ALDH4A1 aldehyde dehydrogenase 4 family, member A1
ANKRD16 ankyrin repeat domain 16
ANKRD28 ankyrin repeat domain 28
APH1A APH1A gamma secretase subunit
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like
ASB13 ankyrin repeat and SOCS box containing 13
ATN1 atrophin 1
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
BCAN brevican
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BCL6 B-cell CLL/lymphoma 6
BEND7 BEN domain containing 7
BID BH3 interacting domain death agonist
BIN3 bridging integrator 3
BMI1 BMI1 proto-oncogene, polycomb ring finger
BPIFA1 BPI fold containing family A, member 1
C16ORF87 chromosome 16 open reading frame 87
C1ORF61 chromosome 1 open reading frame 61
C1QL1 complement component 1, q subcomponent-like 1
C20ORF203 chromosome 20 open reading frame 203
C2ORF78 chromosome 2 open reading frame 78
C6ORF89 chromosome 6 open reading frame 89
C7ORF13 chromosome 7 open reading frame 13
C7ORF61 chromosome 7 open reading frame 61
CABIN1 calcineurin binding protein 1
CACNA2D4 calcium channel, voltage-dependent, alpha 2/delta subunit 4
CACNG7 calcium channel, voltage-dependent, gamma subunit 7
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CCDC115 coiled-coil domain containing 115
CCDC183 coiled-coil domain containing 183
CD9 CD9 molecule
CDC123 cell division cycle 123
CDC42SE1 CDC42 small effector 1
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CECR5 cat eye syndrome chromosome region, candidate 5
CELF2 CUGBP, Elav-like family member 2
CELP carboxyl ester lipase pseudogene
CHD4 chromodomain helicase DNA binding protein 4
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLASP1 cytoplasmic linker associated protein 1
CNTN3 contactin 3 (plasmacytoma associated)
COASY CoA synthase
COMMD2 COMM domain containing 2
COMMD3 COMM domain containing 3
CRIPT cysteine-rich PDZ-binding protein
CS citrate synthase
CSDC2 cold shock domain containing C2, RNA binding
CTBP2 C-terminal binding protein 2
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
DAPK1 death-associated protein kinase 1
DAZAP2 DAZ associated protein 2
DCAF12 DDB1 and CUL4 associated factor 12
DCAF8 DDB1 and CUL4 associated factor 8
DCAKD dephospho-CoA kinase domain containing
DDHD1 DDHD domain containing 1
DEFB129 defensin, beta 129
DENND4B DENN/MADD domain containing 4B
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding)
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding)
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DLL1 delta-like 1 (Drosophila)
DLL3 delta-like 3 (Drosophila)
DPP10 dipeptidyl-peptidase 10 (non-functional)
DPPA5 developmental pluripotency associated 5
DQX1 DEAQ box RNA-dependent ATPase 1
DTX4 deltex 4, E3 ubiquitin ligase
ECH1 enoyl CoA hydratase 1, peroxisomal
EEF1A1P9 eukaryotic translation elongation factor 1 alpha 1 pseudogene 9
EFHD1 EF-hand domain family, member D1
EIF4E2 eukaryotic translation initiation factor 4E family member 2
EIF5AL1 eukaryotic translation initiation factor 5A-like 1
ELMO2 engulfment and cell motility 2
EML3 echinoderm microtubule associated protein like 3
ENOPH1 enolase-phosphatase 1
ERH enhancer of rudimentary homolog (Drosophila)
EXOSC5 exosome component 5
F2R coagulation factor II (thrombin) receptor
FAM171A1 family with sequence similarity 171, member A1
FAM182A family with sequence similarity 182, member A
FAM182B family with sequence similarity 182, member B
FAM188A family with sequence similarity 188, member A
FAM208B family with sequence similarity 208, member B
FAM219B family with sequence similarity 219, member B
FBXO18 F-box protein, helicase, 18
FBXO46 F-box protein 46
FBXW12 F-box and WD repeat domain containing 12
FCHSD2 FCH and double SH3 domains 2
FGF6 fibroblast growth factor 6
FGF8 fibroblast growth factor 8 (androgen-induced)
FKBP4 FK506 binding protein 4, 59kDa
FLJ42393 uncharacterized LOC401105
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
FYN FYN proto-oncogene, Src family tyrosine kinase
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GAPDH glyceraldehyde-3-phosphate dehydrogenase
GAS5 growth arrest-specific 5 (non-protein coding)
GATSL3 GATS protein-like 3
GDI2 GDP dissociation inhibitor 2
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GH1 growth hormone 1
GLB1L2 galactosidase, beta 1-like 2
GLUD1 glutamate dehydrogenase 1
GNRHR2 gonadotropin-releasing hormone (type 2) receptor 2, pseudogene
GOLGA6C golgin A6 family, member C
GPR162 G protein-coupled receptor 162
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
GSC2 goosecoid homeobox 2
GSTM1 glutathione S-transferase mu 1
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene)
GSTTP2 glutathione S-transferase theta pseudogene 2
GTPBP4 GTP binding protein 4
HBQ1 hemoglobin, theta 1
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HM13 histocompatibility (minor) 13
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
HSPA14 heat shock 70kDa protein 14
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
IDI2 isopentenyl-diphosphate delta isomerase 2
IER3 immediate early response 3
IFFO1 intermediate filament family orphan 1
IFITM1 interferon induced transmembrane protein 1
IGDCC3 immunoglobulin superfamily, DCC subclass, member 3
IGFALS insulin-like growth factor binding protein, acid labile subunit
IL5 interleukin 5
ING4 inhibitor of growth family, member 4
INPPL1 inositol polyphosphate phosphatase-like 1
IPO7 importin 7
IRX2 iroquois homeobox 2
ITSN1 intersectin 1 (SH3 domain protein)
JADE1 jade family PHD finger 1
JARID2 jumonji, AT rich interactive domain 2
KAT8 K(lysine) acetyltransferase 8
KCNK4 potassium channel, two pore domain subfamily K, member 4
KCTD6 potassium channel tetramerization domain containing 6
KHDC3L KH domain containing 3-like, subcortical maternal complex member
KIN Kin17 DNA and RNA binding protein
KLHDC8B kelch domain containing 8B
KSR1 kinase suppressor of ras 1
LAMB2P1 laminin, beta 2 pseudogene 1
LARP4B La ribonucleoprotein domain family, member 4B
LEFTY1 left-right determination factor 1
LEFTY2 left-right determination factor 2
LINC00052 long intergenic non-protein coding RNA 52
LINC00515 long intergenic non-protein coding RNA 515
LINC00575 long intergenic non-protein coding RNA 575
LIX1L Lix1 homolog (chicken) like
LOC339568 uncharacterized LOC339568
LOC93622 Morf4 family associated protein 1-like 1 pseudogene
LPCAT3 lysophosphatidylcholine acyltransferase 3
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
LRTM2 leucine-rich repeats and transmembrane domains 2
LTBP4 latent transforming growth factor beta binding protein 4
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MCU mitochondrial calcium uniporter
MEIG1 meiosis/spermiogenesis associated 1
MEX3C mex-3 RNA binding family member C
MFRP membrane frizzled-related protein
MIA2 melanoma inhibitory activity 2
MIER3 mesoderm induction early response 1, family member 3
MLF2 myeloid leukemia factor 2
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MMP19 matrix metallopeptidase 19
MRPL44 mitochondrial ribosomal protein L44
MS4A8 membrane-spanning 4-domains, subfamily A, member 8
MSS51 MSS51 mitochondrial translational activator
MTA2 metastasis associated 1 family, member 2
MTCH1 mitochondrial carrier 1
MTPAP mitochondrial poly(A) polymerase
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1)
NAPSA napsin A aspartic peptidase
NAV2 neuron navigator 2
NBPF10 neuroblastoma breakpoint family, member 10
NKAIN4 Na+/K+ transporting ATPase interacting 4
NKTR natural killer cell triggering receptor
NLGN2 neuroligin 2
NME4 NME/NM23 nucleoside diphosphate kinase 4
NMT2 N-myristoyltransferase 2
NOP2 NOP2 nucleolar protein
NPPB natriuretic peptide B
NSUN6 NOP2/Sun domain family, member 6
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
NXN nucleoredoxin
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OR10Q1 olfactory receptor, family 10, subfamily Q, member 1
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2Z1 olfactory receptor, family 2, subfamily Z, member 1
OR51G2 olfactory receptor, family 51, subfamily G, member 2
OR52D1 olfactory receptor, family 52, subfamily D, member 1
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR5K2 olfactory receptor, family 5, subfamily K, member 2
PARP11 poly (ADP-ribose) polymerase family, member 11
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDHB10 protocadherin beta 10
PCGF2 polycomb group ring finger 2
PDCD2L programmed cell death 2-like
PDCD6 programmed cell death 6
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PDZD9 PDZ domain containing 9
PDZK1P1 PDZ domain containing 1 pseudogene 1
PEA15 phosphoprotein enriched in astrocytes 15
PEX5 peroxisomal biogenesis factor 5
PGC progastricsin (pepsinogen C)
PHB2 prohibitin 2
PHF10 PHD finger protein 10
PHLDB1 pleckstrin homology-like domain, family B, member 1
PHYH phytanoyl-CoA 2-hydroxylase
PIANP PILR alpha associated neural protein
PITRM1 pitrilysin metallopeptidase 1
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
POGZ pogo transposable element with ZNF domain
POU2F1 POU class 2 homeobox 1
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme
PPP5C protein phosphatase 5, catalytic subunit
PPY2P pancreatic polypeptide 2, pseudogene
PRMT1 protein arginine methyltransferase 1
PRPF18 pre-mRNA processing factor 18
PRR5L proline rich 5 like
PRRX1 paired related homeobox 1
PRSS35 protease, serine, 35
PRSS37 protease, serine, 37
PRTG protogenin
PTCH1 patched 1
PTMS parathymosin
PYCR2 pyrroline-5-carboxylate reductase family, member 2
QSOX2 quiescin Q6 sulfhydryl oxidase 2
RABGAP1 RAB GTPase activating protein 1
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RAD52 RAD52 homolog (S. cerevisiae)
RARA retinoic acid receptor, alpha
RBM17 RNA binding motif protein 17
RBM5 RNA binding motif protein 5
RC3H1 ring finger and CCCH-type domains 1
RDH16 retinol dehydrogenase 16 (all-trans)
RHPN2 rhophilin, Rho GTPase binding protein 2
RNASE9 ribonuclease, RNase A family, 9 (non-active)
RNF146 ring finger protein 146
RNF182 ring finger protein 182
RNF5 ring finger protein 5, E3 ubiquitin protein ligase
RPL13A ribosomal protein L13a
RPL17 ribosomal protein L17
RPL18 ribosomal protein L18
RPL7A ribosomal protein L7a
RPLP0 ribosomal protein, large, P0
RPP38 ribonuclease P/MRP 38kDa subunit
RPS11 ribosomal protein S11
RPUSD1 RNA pseudouridylate synthase domain containing 1
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RSU1 Ras suppressor protein 1
RUFY3 RUN and FYVE domain containing 3
RXRG retinoid X receptor, gamma
S1PR3 sphingosine-1-phosphate receptor 3
SAPCD2 suppressor APC domain containing 2
SCP2D1 SCP2 sterol-binding domain containing 1
SEC11A SEC11 homolog A (S. cerevisiae)
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SEPHS1 selenophosphate synthetase 1
SEPT2 septin 2
SFTA2 surfactant associated 2
SFTA3 surfactant associated 3
SFTPA1 surfactant protein A1
SFTPA2 surfactant protein A2
SFTPB surfactant protein B
SGK1 serum/glucocorticoid regulated kinase 1
SH3RF3 SH3 domain containing ring finger 3
SIK3 SIK family kinase 3
SIRT2 sirtuin 2
SIX1 SIX homeobox 1
SLC25A47 solute carrier family 25, member 47
SLC35C2 solute carrier family 35 (GDP-fucose transporter), member C2
SLC35E4 solute carrier family 35, member E4
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SMAD3 SMAD family member 3
SMAD7 SMAD family member 7
SMOC1 SPARC related modular calcium binding 1
SNORA13 small nucleolar RNA, H/ACA box 13
SNORD115-7 small nucleolar RNA, C/D box 115-7
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SOX2 SRY (sex determining region Y)-box 2
SPACA1 sperm acrosome associated 1
SPATA9 spermatogenesis associated 9
SPSB2 splA/ryanodine receptor domain and SOCS box containing 2
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
SS18L2 synovial sarcoma translocation gene on chromosome 18-like 2
SSPO SCO-spondin
SSUH2 ssu-2 homolog (C. elegans)
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STAMBP STAM binding protein
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila)
SYCP2L synaptonemal complex protein 2-like
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TARP TCR gamma alternate reading frame protein
TAS2R38 taste receptor, type 2, member 38
TBC1D14 TBC1 domain family, member 14
TBPL1 TBP-like 1
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TCP10 t-complex 10
TCP10L t-complex 10-like
TCP11 t-complex 11, testis-specific
TECRL trans-2,3-enoyl-CoA reductase-like
TEX13A testis expressed 13A
TEX40 testis expressed 40
THRA thyroid hormone receptor, alpha
TIGD1 tigger transposable element derived 1
TIGD7 tigger transposable element derived 7
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM132C transmembrane protein 132C
TMEM167A transmembrane protein 167A
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TPI1 triosephosphate isomerase 1
TRDMT1 tRNA aspartic acid methyltransferase 1
TREH trehalase (brush-border membrane glycoprotein)
TRIM27 tripartite motif containing 27
TRIM42 tripartite motif containing 42
TRIM49 tripartite motif containing 49
TSEN34 TSEN34 tRNA splicing endonuclease subunit
TSNARE1 t-SNARE domain containing 1
TTYH1 tweety family member 1
TUBB8 tubulin, beta 8 class VIII
UBA2 ubiquitin-like modifier activating enzyme 2
UBQLN4 ubiquilin 4
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
USH1C Usher syndrome 1C (autosomal recessive, severe)
USP21 ubiquitin specific peptidase 21
USP3 ubiquitin specific peptidase 3
USP44 ubiquitin specific peptidase 44
USP6NL USP6 N-terminal like
UTS2 urotensin 2
VCAN versican
WDR37 WD repeat domain 37
WISP2 WNT1 inducible signaling pathway protein 2
YAF2 YY1 associated factor 2
ZFYVE16 zinc finger, FYVE domain containing 16
ZMYND11 zinc finger, MYND-type containing 11
ZNF224 zinc finger protein 224
ZNF225 zinc finger protein 225
ZNF226 zinc finger protein 226
ZNF234 zinc finger protein 234
ZNF235 zinc finger protein 235
ZNF260 zinc finger protein 260
ZNF274 zinc finger protein 274
ZNF280D zinc finger protein 280D
ZNF285 zinc finger protein 285
ZNF384 zinc finger protein 384
ZNF446 zinc finger protein 446
ZNF518A zinc finger protein 518A
ZNF534 zinc finger protein 534
ZNF606 zinc finger protein 606
ZNF610 zinc finger protein 610
ZNF75A zinc finger protein 75a
ZNF766 zinc finger protein 766
ZNF814 zinc finger protein 814
ZNF823 zinc finger protein 823

low expression

Symbol Name
ADNP2 ADNP homeobox 2
ANAPC10 anaphase promoting complex subunit 10
ATP9B ATPase, class II, type 9B
CXORF56 chromosome X open reading frame 56
LOC728024 chromosome X open reading frame 56 pseudogene
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
NAF1 nuclear assembly factor 1 ribonucleoprotein
PLAA phospholipase A2-activating protein
RBFA ribosome binding factor A (putative)
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
TCEAL7 transcription elongation factor A (SII)-like 7
TMEM192 transmembrane protein 192
TUBGCP5 tubulin, gamma complex associated protein 5
UBL4A ubiquitin-like 4A
ZNF630 zinc finger protein 630