Brain Lower Grade Glioma_LGG_TCGA-FG-A60K-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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301 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-A60K-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL4 arylacetamide deacetylase-like 4
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ADA adenosine deaminase
ADAM29 ADAM metallopeptidase domain 29
ADAM5 ADAM metallopeptidase domain 5 (pseudogene)
ADGRA3 adhesion G protein-coupled receptor A3
ADGRG7 adhesion G protein-coupled receptor G7
ADGRV1 adhesion G protein-coupled receptor V1
AKAP7 A kinase (PRKA) anchor protein 7
ALMS1P Alstrom syndrome 1 pseudogene
ANGEL1 angel homolog 1 (Drosophila)
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene
ANKRD6 ankyrin repeat domain 6
ANO8 anoctamin 8
ANXA8L1 annexin A8-like 1
APH1B APH1B gamma secretase subunit
ARGLU1 arginine and glutamate rich 1
ARHGAP36 Rho GTPase activating protein 36
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ATM ATM serine/threonine kinase
ATXN7 ataxin 7
AXDND1 axonemal dynein light chain domain containing 1
BBS2 Bardet-Biedl syndrome 2
BCHE butyrylcholinesterase
BLM Bloom syndrome, RecQ helicase-like
C10ORF62 chromosome 10 open reading frame 62
C10ORF99 chromosome 10 open reading frame 99
C16ORF72 chromosome 16 open reading frame 72
C17ORF100 chromosome 17 open reading frame 100
C1ORF106 chromosome 1 open reading frame 106
C2ORF72 chromosome 2 open reading frame 72
C3ORF17 chromosome 3 open reading frame 17
C8B complement component 8, beta polypeptide
C8ORF44 chromosome 8 open reading frame 44
CALN1 calneuron 1
CBR4 carbonyl reductase 4
CBS cystathionine-beta-synthase
CCDC160 coiled-coil domain containing 160
CCDC73 coiled-coil domain containing 73
CDC14B cell division cycle 14B
CEP44 centrosomal protein 44kDa
CERKL ceramide kinase-like
CFAP74 cilia and flagella associated protein 74
CGRRF1 cell growth regulator with ring finger domain 1
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
CHURC1 churchill domain containing 1
CLK4 CDC-like kinase 4
COG2 component of oligomeric golgi complex 2
COLGALT2 collagen beta(1-O)galactosyltransferase 2
CPO carboxypeptidase O
CRCT1 cysteine-rich C-terminal 1
CREBZF CREB/ATF bZIP transcription factor
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2
CT62 cancer/testis antigen 62
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CUZD1 CUB and zona pellucida-like domains 1
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
CXCR4 chemokine (C-X-C motif) receptor 4
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1
DACH2 dachshund family transcription factor 2
DBX2 developing brain homeobox 2
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1
DDIT4 DNA-damage-inducible transcript 4
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DDX59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
DEFB109P1B defensin, beta 109, pseudogene 1B
DENND4C DENN/MADD domain containing 4C
DGCR6 DiGeorge syndrome critical region gene 6
DGKD diacylglycerol kinase, delta 130kDa
DIAPH2 diaphanous-related formin 2
DNMBP dynamin binding protein
DNMBP-AS1 DNMBP antisense RNA 1
DPF3 D4, zinc and double PHD fingers, family 3
DSG3 desmoglein 3
EGLN3 egl-9 family hypoxia-inducible factor 3
EHD1 EH-domain containing 1
ENGASE endo-beta-N-acetylglucosaminidase
ERO1LB ERO1-like beta (S. cerevisiae)
ETV5 ets variant 5
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM178A family with sequence similarity 178, member A
FAM218A family with sequence similarity 218, member A
FAM226B family with sequence similarity 226, member B (non-protein coding)
FAM65C family with sequence similarity 65, member C
FHDC1 FH2 domain containing 1
FLJ33360 FLJ33360 protein
FOXG1 forkhead box G1
FOXO1 forkhead box O1
FSTL5 follistatin-like 5
GATSL3 GATS protein-like 3
GDF9 growth differentiation factor 9
GIN1 gypsy retrotransposon integrase 1
GK5 glycerol kinase 5 (putative)
GLP1R glucagon-like peptide 1 receptor
GOLGA8A golgin A8 family, member A
GOPC golgi-associated PDZ and coiled-coil motif containing
GPR161 G protein-coupled receptor 161
GREB1 growth regulation by estrogen in breast cancer 1
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
HDAC4 histone deacetylase 4
HIST1H2BI histone cluster 1, H2bi
HKDC1 hexokinase domain containing 1
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSPB2 heat shock 27kDa protein 2
IFITM5 interferon induced transmembrane protein 5
INPP1 inositol polyphosphate-1-phosphatase
INTU inturned planar cell polarity protein
KATNBL1 katanin p80 subunit B-like 1
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
KCNAB3 potassium channel, voltage gated subfamily A regulatory beta subunit 3
KCTD3 potassium channel tetramerization domain containing 3
KIAA1147 KIAA1147
KIF3A kinesin family member 3A
KLF15 Kruppel-like factor 15
KLHDC1 kelch domain containing 1
KLK13 kallikrein-related peptidase 13
KLK9 kallikrein-related peptidase 9
KRT39 keratin 39, type I
KSR1 kinase suppressor of ras 1
LAMA1 laminin, alpha 1
LARS leucyl-tRNA synthetase
LCAT lecithin-cholesterol acyltransferase
LCE3D late cornified envelope 3D
LCE3E late cornified envelope 3E
LIAS lipoic acid synthetase
LINC00161 long intergenic non-protein coding RNA 161
LINC00244 long intergenic non-protein coding RNA 244
LINC00472 long intergenic non-protein coding RNA 472
LINC01551 long intergenic non-protein coding RNA 1551
LMO3 LIM domain only 3 (rhombotin-like 2)
LOC100133050 glucuronidase, beta pseudogene
LOC441666 zinc finger protein 91 pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC728613 programmed cell death 6 pseudogene
LPCAT1 lysophosphatidylcholine acyltransferase 1
LPL lipoprotein lipase
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC3 leucine rich repeat containing 3
LRRC30 leucine rich repeat containing 30
LRRN1 leucine rich repeat neuronal 1
LRRTM4 leucine rich repeat transmembrane neuronal 4
LURAP1L leucine rich adaptor protein 1-like
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAMDC4 MAM domain containing 4
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MARVELD3 MARVEL domain containing 3
MCF2 MCF.2 cell line derived transforming sequence
MCL1 myeloid cell leukemia 1
MCMDC2 minichromosome maintenance domain containing 2
MCTS1 malignant T cell amplified sequence 1
METTL21C methyltransferase like 21C
MFGE8 milk fat globule-EGF factor 8 protein
MGAT4C MGAT4 family, member C
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MID1 midline 1
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MINPP1 multiple inositol-polyphosphate phosphatase 1
MOGAT1 monoacylglycerol O-acyltransferase 1
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
N4BP2L2-IT2 N4BPL2 intronic transcript 2
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NAP1L6 nucleosome assembly protein 1-like 6
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NBEAP1 neurobeachin pseudogene 1
NBPF15 neuroblastoma breakpoint family, member 15
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NHSL1 NHS-like 1
NPEPPS aminopeptidase puromycin sensitive
NR2E3 nuclear receptor subfamily 2, group E, member 3
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NUP35 nucleoporin 35kDa
OPN5 opsin 5
OR11H6 olfactory receptor, family 11, subfamily H, member 6
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene
OR4N4 olfactory receptor, family 4, subfamily N, member 4
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR6X1 olfactory receptor, family 6, subfamily X, member 1
PABPC5 poly(A) binding protein, cytoplasmic 5
PAN3 PAN3 poly(A) specific ribonuclease subunit
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PCDHA5 protocadherin alpha 5
PCDHA9 protocadherin alpha 9
PCDHB15 protocadherin beta 15
PCDHB17P protocadherin beta 17 pseudogene
PCDHGA9 protocadherin gamma subfamily A, 9
PCDHGB4 protocadherin gamma subfamily B, 4
PCSK6 proprotein convertase subtilisin/kexin type 6
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDE4D phosphodiesterase 4D, cAMP-specific
PEAR1 platelet endothelial aggregation receptor 1
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
PLEKHN1 pleckstrin homology domain containing, family N member 1
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PNISR PNN-interacting serine/arginine-rich protein
PON3 paraoxonase 3
POTEB POTE ankyrin domain family, member B
PRICKLE2 prickle homolog 2 (Drosophila)
PRO0611 PRO0611 protein
PTCHD4 patched domain containing 4
RAB10 RAB10, member RAS oncogene family
RASL12 RAS-like, family 12
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RGL1 ral guanine nucleotide dissociation stimulator-like 1
RGR retinal G protein coupled receptor
RHOB ras homolog family member B
RIMKLB ribosomal modification protein rimK-like family member B
RNF146 ring finger protein 146
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RUSC1-AS1 RUSC1 antisense RNA 1
S100A7A S100 calcium binding protein A7A
SALL4 spalt-like transcription factor 4
SASH1 SAM and SH3 domain containing 1
SCAND2P SCAN domain containing 2 pseudogene
SCARB1 scavenger receptor class B, member 1
SCML2 sex comb on midleg-like 2 (Drosophila)
SENP7 SUMO1/sentrin specific peptidase 7
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7
SESN1 sestrin 1
SF3A1 splicing factor 3a, subunit 1, 120kDa
SFRP2 secreted frizzled-related protein 2
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SGK1 serum/glucocorticoid regulated kinase 1
SH3YL1 SH3 and SYLF domain containing 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC36A3 solute carrier family 36, member 3
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SLITRK3 SLIT and NTRK-like family, member 3
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNHG20 small nucleolar RNA host gene 20
SPIN3 spindlin family, member 3
SPRR1A small proline-rich protein 1A
SPRR1B small proline-rich protein 1B
SPRR2A small proline-rich protein 2A
SPRR2E small proline-rich protein 2E
SPRR2F small proline-rich protein 2F
SPRR2G small proline-rich protein 2G
SPRR3 small proline-rich protein 3
SRSF5 serine/arginine-rich splicing factor 5
SSTR2 somatostatin receptor 2
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STPG2 sperm-tail PG-rich repeat containing 2
SYT14 synaptotagmin XIV
TAS2R39 taste receptor, type 2, member 39
TAS2R43 taste receptor, type 2, member 43
TAS2R8 taste receptor, type 2, member 8
TAS2R9 taste receptor, type 2, member 9
TAT tyrosine aminotransferase
TBC1D10A TBC1 domain family, member 10A
TBC1D23 TBC1 domain family, member 23
TBC1D28 TBC1 domain family, member 28
TCTE3 t-complex-associated-testis-expressed 3
TEX33 testis expressed 33
THSD4 thrombospondin, type I, domain containing 4
TIAM1 T-cell lymphoma invasion and metastasis 1
TMEM100 transmembrane protein 100
TMEM135 transmembrane protein 135
TMEM257 transmembrane protein 257
TNK2 tyrosine kinase, non-receptor, 2
TPPP2 tubulin polymerization-promoting protein family member 2
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TREH trehalase (brush-border membrane glycoprotein)
TRIM78P tripartite motif containing 78, pseudogene
TTC14 tetratricopeptide repeat domain 14
TTC22 tetratricopeptide repeat domain 22
TTLL4 tubulin tyrosine ligase-like family member 4
UBA5 ubiquitin-like modifier activating enzyme 5
USP3 ubiquitin specific peptidase 3
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VEPH1 ventricular zone expressed PH domain-containing 1
WASF3 WAS protein family, member 3
WFDC12 WAP four-disulfide core domain 12
WSB1 WD repeat and SOCS box containing 1
ZBED8 zinc finger, BED-type containing 8
ZBTB24 zinc finger and BTB domain containing 24
ZFAND5 zinc finger, AN1-type domain 5
ZMYM5 zinc finger, MYM-type 5
ZNF169 zinc finger protein 169
ZNF189 zinc finger protein 189
ZNF208 zinc finger protein 208
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF280D zinc finger protein 280D
ZNF514 zinc finger protein 514
ZNF594 zinc finger protein 594
ZNF605 zinc finger protein 605
ZNF711 zinc finger protein 711

low expression

Symbol Name
DHDDS dehydrodolichyl diphosphate synthase
LRIF1 ligand dependent nuclear receptor interacting factor 1