Brain Lower Grade Glioma_LGG_TCGA-HT-7471-01A-11R-2256-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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263 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7471-01A-11R-2256-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABHD16A abhydrolase domain containing 16A
ABRA actin binding Rho activating protein
ACRC acidic repeat containing
ACTA1 actin, alpha 1, skeletal muscle
ADAM21 ADAM metallopeptidase domain 21
ADAM21P1 ADAM metallopeptidase domain 21 pseudogene 1
ADAR adenosine deaminase, RNA-specific
ADGRG4 adhesion G protein-coupled receptor G4
AHSG alpha-2-HS-glycoprotein
ALPL alkaline phosphatase, liver/bone/kidney
ANK1 ankyrin 1, erythrocytic
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKRD31 ankyrin repeat domain 31
APOBEC3B apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
ARL17A ADP-ribosylation factor-like 17A
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ARPIN actin-related protein 2/3 complex inhibitor
ART1 ADP-ribosyltransferase 1
B2M beta-2-microglobulin
BLM Bloom syndrome, RecQ helicase-like
BMPER BMP binding endothelial regulator
BTN3A3 butyrophilin, subfamily 3, member A3
C17ORF102 chromosome 17 open reading frame 102
C19ORF57 chromosome 19 open reading frame 57
C2CD3 C2 calcium-dependent domain containing 3
C2ORF47 chromosome 2 open reading frame 47
C5ORF56 chromosome 5 open reading frame 56
CA10 carbonic anhydrase X
CAPN14 calpain 14
CAPN9 calpain 9
CASP8AP2 caspase 8 associated protein 2
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle)
CDCA5 cell division cycle associated 5
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CDRT1 CMT1A duplicated region transcript 1
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CECR2 cat eye syndrome chromosome region, candidate 2
CENPQ centromere protein Q
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
CLEC4C C-type lectin domain family 4, member C
CLVS2 clavesin 2
CMTR1 cap methyltransferase 1
CPA5 carboxypeptidase A5
CREB3L4 cAMP responsive element binding protein 3-like 4
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CT45A2 cancer/testis antigen family 45, member A2
CT45A5 cancer/testis antigen family 45, member A5
CT45A6 cancer/testis antigen family 45, member A6
CT62 cancer/testis antigen 62
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
DAND5 DAN domain family member 5, BMP antagonist
DBR1 debranching RNA lariats 1
DCC DCC netrin 1 receptor
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DEFB134 defensin, beta 134
DGKK diacylglycerol kinase, kappa
DHRS2 dehydrogenase/reductase (SDR family) member 2
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DIAPH2 diaphanous-related formin 2
DNAH1 dynein, axonemal, heavy chain 1
DSCR3 Down syndrome critical region 3
DTL denticleless E3 ubiquitin protein ligase homolog (Drosophila)
DUSP28 dual specificity phosphatase 28
DUT deoxyuridine triphosphatase
E2F1 E2F transcription factor 1
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2
ERAP1 endoplasmic reticulum aminopeptidase 1
ERCC3 excision repair cross-complementation group 3
ERN2 endoplasmic reticulum to nucleus signaling 2
EXOSC6 exosome component 6
FAM111B family with sequence similarity 111, member B
FAM133A family with sequence similarity 133, member A
FAM179A family with sequence similarity 179, member A
FAM83E family with sequence similarity 83, member E
FANCD2 Fanconi anemia, complementation group D2
FCAMR Fc receptor, IgA, IgM, high affinity
FCGBP Fc fragment of IgG binding protein
FDPS farnesyl diphosphate synthase
FEN1 flap structure-specific endonuclease 1
FOXN1 forkhead box N1
GBP6 guanylate binding protein family, member 6
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GHRH growth hormone releasing hormone
GLRA1 glycine receptor, alpha 1
GLT6D1 glycosyltransferase 6 domain containing 1
GLYCTK glycerate kinase
GPBAR1 G protein-coupled bile acid receptor 1
GPX5 glutathione peroxidase 5
GSTA5 glutathione S-transferase alpha 5
GTSF1L gametocyte specific factor 1-like
GUCY2F guanylate cyclase 2F, retinal
HCRTR1 hypocretin (orexin) receptor 1
HDGFL1 hepatoma derived growth factor-like 1
HDX highly divergent homeobox
HEMK1 HemK methyltransferase family member 1
HHLA1 HERV-H LTR-associating 1
HIRIP3 HIRA interacting protein 3
HIST1H4J histone cluster 1, H4j
HKDC1 hexokinase domain containing 1
HRK harakiri, BCL2 interacting protein
HSF2BP heat shock transcription factor 2 binding protein
IFI35 interferon-induced protein 35
IFIT1 interferon-induced protein with tetratricopeptide repeats 1
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
ILDR2 immunoglobulin-like domain containing receptor 2
INSL6 insulin-like 6
INSM2 insulinoma-associated 2
IRF9 interferon regulatory factor 9
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNK10 potassium channel, two pore domain subfamily K, member 10
KCP kielin/chordin-like protein
KIF22 kinesin family member 22
KRT37 keratin 37, type I
LACE1 lactation elevated 1
LCE1B late cornified envelope 1B
LINC00588 long intergenic non-protein coding RNA 588
LINC00652 long intergenic non-protein coding RNA 652
LINC00696 long intergenic non-protein coding RNA 696
LINC01587 long intergenic non-protein coding RNA 1587
LOC283856 uncharacterized LOC283856
LOC284009 uncharacterized LOC284009
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC728613 programmed cell death 6 pseudogene
LPCAT1 lysophosphatidylcholine acyltransferase 1
LRIT1 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
LRRC16B leucine rich repeat containing 16B
LRRC37A leucine rich repeat containing 37A
LRRC37A2 leucine rich repeat containing 37, member A2
LRRC74A leucine rich repeat containing 74A
LRRIQ4 leucine-rich repeats and IQ motif containing 4
MCM2 minichromosome maintenance complex component 2
MCM3AP-AS1 MCM3AP antisense RNA 1
MCM4 minichromosome maintenance complex component 4
MCM5 minichromosome maintenance complex component 5
MCTS2P malignant T cell amplified sequence 2, pseudogene
MED6 mediator complex subunit 6
MMP10 matrix metallopeptidase 10
MOV10L1 Mov10 RISC complex RNA helicase like 1
MPHOSPH9 M-phase phosphoprotein 9
MRPS11 mitochondrial ribosomal protein S11
MRPS18C mitochondrial ribosomal protein S18C
MT4 metallothionein 4
MUC16 mucin 16, cell surface associated
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYEOV myeloma overexpressed
MYH7 myosin, heavy chain 7, cardiac muscle, beta
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NEU3 sialidase 3 (membrane sialidase)
NEUROD4 neuronal differentiation 4
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NKAPP1 NFKB activating protein pseudogene 1
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17
NUP35 nucleoporin 35kDa
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
OR10K1 olfactory receptor, family 10, subfamily K, member 1
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR4N4 olfactory receptor, family 4, subfamily N, member 4
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
ORC3 origin recognition complex, subunit 3
PARP8 poly (ADP-ribose) polymerase family, member 8
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
PCDHA3 protocadherin alpha 3
PCDHB15 protocadherin beta 15
PCDHB3 protocadherin beta 3
PCDHB7 protocadherin beta 7
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA11 protocadherin gamma subfamily A, 11
PDZRN4 PDZ domain containing ring finger 4
PECR peroxisomal trans-2-enoyl-CoA reductase
PLA2G10 phospholipase A2, group X
PLA2G12B phospholipase A2, group XIIB
POLE2 polymerase (DNA directed), epsilon 2, accessory subunit
POM121L4P POM121 transmembrane nucleoporin-like 4 pseudogene
POU3F4 POU class 3 homeobox 4
PRDM9 PR domain containing 9
PRIM1 primase, DNA, polypeptide 1 (49kDa)
PRIM2 primase, DNA, polypeptide 2 (58kDa)
PRPF8 pre-mRNA processing factor 8
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9
QRICH1 glutamine-rich 1
RBBP8NL RBBP8 N-terminal like
RBM4B RNA binding motif protein 4B
RDM1 RAD52 motif containing 1
RFPL1 ret finger protein-like 1
RGPD8 RANBP2-like and GRIP domain containing 8
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNASE8 ribonuclease, RNase A family, 8
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RRM2 ribonucleotide reductase M2
RUFY4 RUN and FYVE domain containing 4
SF3B4 splicing factor 3b, subunit 4, 49kDa
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2
SLC35D3 solute carrier family 35, member D3
SLC35E3 solute carrier family 35, member E3
SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3
SLC9A7 solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
SMC1A structural maintenance of chromosomes 1A
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1
SMYD4 SET and MYND domain containing 4
SNCAIP synuclein, alpha interacting protein
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SP110 SP110 nuclear body protein
SPANXN3 SPANX family, member N3
SPC25 SPC25, NDC80 kinetochore complex component
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SRSF3 serine/arginine-rich splicing factor 3
SRSF6 serine/arginine-rich splicing factor 6
SUMO1P1 SUMO1 pseudogene 1
SYN3 synapsin III
SYT14 synaptotagmin XIV
TAAR2 trace amine associated receptor 2
TADA2A transcriptional adaptor 2A
TAL2 T-cell acute lymphocytic leukemia 2
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TBX10 T-box 10
TCF19 transcription factor 19
TCL1A T-cell leukemia/lymphoma 1A
TCP10L2 t-complex 10-like 2
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TK1 thymidine kinase 1, soluble
TMEM14B transmembrane protein 14B
TMEM199 transmembrane protein 199
TMEM89 transmembrane protein 89
TMEM97 transmembrane protein 97
TMX2 thioredoxin-related transmembrane protein 2
TRA2B transformer 2 beta homolog (Drosophila)
TREML4 triggering receptor expressed on myeloid cells-like 4
TRIM25 tripartite motif containing 25
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TTC31 tetratricopeptide repeat domain 31
TTLL8 tubulin tyrosine ligase-like family member 8
TUBB1 tubulin, beta 1 class VI
TUBGCP5 tubulin, gamma complex associated protein 5
USP18 ubiquitin specific peptidase 18
USP6 ubiquitin specific peptidase 6
VWC2L von Willebrand factor C domain containing protein 2-like
WDPCP WD repeat containing planar cell polarity effector
WDR61 WD repeat domain 61
WDR76 WD repeat domain 76
XKR7 XK, Kell blood group complex subunit-related family, member 7
ZCCHC13 zinc finger, CCHC domain containing 13
ZDHHC22 zinc finger, DHHC-type containing 22
ZKSCAN7 zinc finger with KRAB and SCAN domains 7
ZNF207 zinc finger protein 207
ZNF232 zinc finger protein 232
ZNF263 zinc finger protein 263
ZNF502 zinc finger protein 502
ZNF660 zinc finger protein 660
ZNF99 zinc finger protein 99
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSCAN23 zinc finger and SCAN domain containing 23

low expression

Symbol Name
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19
WBP4 WW domain binding protein 4