Brain Lower Grade Glioma_LGG_TCGA-HT-7475-01A-11R-2027-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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270 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7475-01A-11R-2027-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASS aminoadipate-semialdehyde synthase
ACVR2B activin A receptor, type IIB
ADCK2 aarF domain containing kinase 2
ADGRG3 adhesion G protein-coupled receptor G3
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AGK acylglycerol kinase
ALKBH4 alkB, alkylation repair homolog 4 (E. coli)
ANKRD30A ankyrin repeat domain 30A
ARF5 ADP-ribosylation factor 5
ARMC10 armadillo repeat containing 10
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASNS asparagine synthetase (glutamine-hydrolyzing)
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein)
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BCL9 B-cell CLL/lymphoma 9
BPGM 2,3-bisphosphoglycerate mutase
C1ORF111 chromosome 1 open reading frame 111
C6ORF223 chromosome 6 open reading frame 223
C7ORF43 chromosome 7 open reading frame 43
C7ORF60 chromosome 7 open reading frame 60
C8ORF76 chromosome 8 open reading frame 76
CABP5 calcium binding protein 5
CARD10 caspase recruitment domain family, member 10
CASD1 CAS1 domain containing 1
CASP2 caspase 2, apoptosis-related cysteine peptidase
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCDC132 coiled-coil domain containing 132
CCR3 chemokine (C-C motif) receptor 3
CDK14 cyclin-dependent kinase 14
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CHRAC1 chromatin accessibility complex 1
CLDN12 claudin 12
CLK2P1 CDC-like kinase 2, pseudogene 1
CMTM2 CKLF-like MARVEL transmembrane domain containing 2
CNOT4 CCR4-NOT transcription complex, subunit 4
COPG2 coatomer protein complex, subunit gamma 2
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
DBF4 DBF4 zinc finger
DEDD death effector domain containing
DHRS7C dehydrogenase/reductase (SDR family) member 7C
DMTF1 cyclin D binding myb-like transcription factor 1
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2
DSCC1 DNA replication and sister chromatid cohesion 1
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
EBAG9 estrogen receptor binding site associated, antigen, 9
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
EFNA3 ephrin-A3
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF3H eukaryotic translation initiation factor 3, subunit H
ENY2 enhancer of yellow 2 homolog (Drosophila)
EXT1 exostosin glycosyltransferase 1
FAM133B family with sequence similarity 133, member B
FAM189B family with sequence similarity 189, member B
FAM200A family with sequence similarity 200, member A
FAM215A family with sequence similarity 215, member A (non-protein coding)
FAM92A1P2 family with sequence similarity 92, member A3
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FFAR2 free fatty acid receptor 2
GATAD2B GATA zinc finger domain containing 2B
GCC1 GRIP and coiled-coil domain containing 1
GIGYF1 GRB10 interacting GYF protein 1
GOLGA6C golgin A6 family, member C
GOT1L1 glutamic-oxaloacetic transaminase 1-like 1
GPC2 glypican 2
GPR85 G protein-coupled receptor 85
GTPBP10 GTP-binding protein 10 (putative)
H2BFWT H2B histone family, member W, testis-specific
HBA1 hemoglobin, alpha 1
HBB hemoglobin, beta
HBD hemoglobin, delta
HBP1 HMG-box transcription factor 1
HGH1 HGH1 homolog (S. cerevisiae)
HIST1H1C histone cluster 1, H1c
HIST1H2AC histone cluster 1, H2ac
HIST1H2AE histone cluster 1, H2ae
HIST1H2BD histone cluster 1, H2bd
HIST1H2BE histone cluster 1, H2be
HIST1H2BF histone cluster 1, H2bf
HIST1H4D histone cluster 1, H4d
HIST1H4H histone cluster 1, H4h
HIST2H2AA3 histone cluster 2, H2aa3
HIST2H2BE histone cluster 2, H2be
HIST2H3C histone cluster 2, H3c
HIST2H4A histone cluster 2, H4a
HIST3H2BB histone cluster 3, H2bb
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IFNA6 interferon, alpha 6
IL18RAP interleukin 18 receptor accessory protein
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
IMMT inner membrane protein, mitochondrial
IMPDH1 IMP (inosine 5'-monophosphate) dehydrogenase 1
INSM1 insulinoma-associated 1
JRK Jrk homolog (mouse)
KDM7A lysine (K)-specific demethylase 7A
KIAA0196 KIAA0196
KIAA1147 KIAA1147
KIF5A kinesin family member 5A
KMT2E lysine (K)-specific methyltransferase 2E
KRIT1 KRIT1, ankyrin repeat containing
KRT28 keratin 28, type I
KRT71 keratin 71, type II
KRTAP5-3 keratin associated protein 5-3
KRTAP5-5 keratin associated protein 5-5
LIG3 ligase III, DNA, ATP-dependent
LINC00051 long intergenic non-protein coding RNA 51
LINC00161 long intergenic non-protein coding RNA 161
LINC01555 long intergenic non-protein coding RNA 1555
LNP1 leukemia NUP98 fusion partner 1
LOC340357 uncharacterized LOC340357
LOC344967 acyl-CoA thioesterase 7 pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC441455 makorin ring finger protein 1 pseudogene
LOC642929 general transcription factor II, i pseudogene
LOC650293 seven transmembrane helix receptor
LOC729609 uncharacterized LOC729609
LRRC4 leucine rich repeat containing 4
LRRN3 leucine rich repeat neuronal 3
LSM11 LSM11, U7 small nuclear RNA associated
LUC7L2 LUC7-like 2 (S. cerevisiae)
LYZL1 lysozyme-like 1
MAF1 MAF1 homolog (S. cerevisiae)
MCM7 minichromosome maintenance complex component 7
MDS2 myelodysplastic syndrome 2 translocation associated
MEPCE methylphosphate capping enzyme
METTL13 methyltransferase like 13
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
MGC16142 uncharacterized protein MGC16142
MIR17HG miR-17-92 cluster host gene
MKRN1 makorin ring finger protein 1
MRGPRX4 MAS-related GPR, member X4
MRPL35 mitochondrial ribosomal protein L35
MRPS33 mitochondrial ribosomal protein S33
MTERF1 mitochondrial transcription termination factor 1
MTERF3 mitochondrial transcription termination factor 3
MYL4 myosin, light chain 4, alkali; atrial, embryonic
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NEGR1 neuronal growth regulator 1
NFE2 nuclear factor, erythroid 2
NGB neuroglobin
NIPAL2 NIPA-like domain containing 2
NKAPL NFKB activating protein-like
NREP neuronal regeneration related protein
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
NUDCD1 NudC domain containing 1
NUP205 nucleoporin 205kDa
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
OOEP oocyte expressed protein
OR13C3 olfactory receptor, family 13, subfamily C, member 3
OR14C36 olfactory receptor, family 14, subfamily C, member 36
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2M5 olfactory receptor, family 2, subfamily M, member 5
OR2T33 olfactory receptor, family 2, subfamily T, member 33
OR2T4 olfactory receptor, family 2, subfamily T, member 4
OR2W3 olfactory receptor, family 2, subfamily W, member 3
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OR6X1 olfactory receptor, family 6, subfamily X, member 1
OR7G3 olfactory receptor, family 7, subfamily G, member 3
OR8D4 olfactory receptor, family 8, subfamily D, member 4
ORC5 origin recognition complex, subunit 5
OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2
PEX11B peroxisomal biogenesis factor 11 beta
PGBD2 piggyBac transposable element derived 2
PGLYRP1 peptidoglycan recognition protein 1
PHF20L1 PHD finger protein 20-like 1
PHOSPHO1 phosphatase, orphan 1
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
PIPSL PIP5K1A and PSMD4-like, pseudogene
PLA2G3 phospholipase A2, group III
PMPCB peptidase (mitochondrial processing) beta
POGK pogo transposable element with KRAB domain
POLR2J3 polymerase (RNA) II (DNA directed) polypeptide J3
POLR3C polymerase (RNA) III (DNA directed) polypeptide C (62kD)
POP7 processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
PPAN-P2RY11 PPAN-P2RY11 readthrough
PPP1R9A protein phosphatase 1, regulatory subunit 9A
PRAMEF20 PRAME family member 20
PRKRIP1 PRKR interacting protein 1 (IL11 inducible)
PTCD1 pentatricopeptide repeat domain 1
PTGDR2 prostaglandin D2 receptor 2
PTK2 protein tyrosine kinase 2
PUS7 pseudouridylate synthase 7 (putative)
PVT1 Pvt1 oncogene (non-protein coding)
PYGO2 pygopus family PHD finger 2
RAD21 RAD21 homolog (S. pombe)
RBM48 RNA binding motif protein 48
RC3H1 ring finger and CCCH-type domains 1
RCOR3 REST corepressor 3
RINT1 RAD50 interactor 1
RNF139 ring finger protein 139
RPL10A ribosomal protein L10a
RPL19P12 ribosomal protein L19 pseudogene 12
RPL31P11 ribosomal protein L31 pseudogene 11
RPL8 ribosomal protein L8
RPS26P11 ribosomal protein S26 pseudogene 11
RPS27 ribosomal protein S27
RPS4Y2 ribosomal protein S4, Y-linked 2
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
S100A12 S100 calcium binding protein A12
S100A8 S100 calcium binding protein A8
SBF1P1 SET binding factor 1 pseudogene 1
SDHAF3 succinate dehydrogenase complex assembly factor 3
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13
SLC37A3 solute carrier family 37, member 3
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SND1-IT1 SND1 intronic transcript 1
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SQLE squalene epoxidase
SRPK2 SRSF protein kinase 2
STAG3 stromal antigen 3
TAAR9 trace amine associated receptor 9 (gene/pseudogene)
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
TATDN1 TatD DNase domain containing 1
TCAF1 TRPM8 channel-associated factor 1
TCAM1P testicular cell adhesion molecule 1, pseudogene
TEX37 testis expressed 37
TFR2 transferrin receptor 2
THAP5 THAP domain containing 5
TIGD5 tigger transposable element derived 5
TMEM183A transmembrane protein 183A
TMEM243 transmembrane protein 243, mitochondrial
TNPO3 transportin 3
TOP1MT topoisomerase (DNA) I, mitochondrial
TRIM40 tripartite motif containing 40
TRIM46 tripartite motif containing 46
TRIM51 tripartite motif-containing 51
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TRRAP transformation/transcription domain-associated protein
UBN2 ubinuclein 2
UCK2 uridine-cytidine kinase 2
UNC13C unc-13 homolog C (C. elegans)
UPK3BL uroplakin 3B-like
USP21 ubiquitin specific peptidase 21
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WASL Wiskott-Aldrich syndrome-like
WFDC11 WAP four-disulfide core domain 11
ZC3H3 zinc finger CCCH-type containing 3
ZC3HC1 zinc finger, C3HC-type containing 1
ZHX2 zinc fingers and homeoboxes 2
ZKSCAN5 zinc finger with KRAB and SCAN domains 5
ZNF250 zinc finger protein 250
ZNF251 zinc finger protein 251
ZNF277 zinc finger protein 277
ZNF280D zinc finger protein 280D
ZNF3 zinc finger protein 3
ZNF30 zinc finger protein 30
ZNF394 zinc finger protein 394
ZNF623 zinc finger protein 623
ZNF655 zinc finger protein 655
ZNF7 zinc finger protein 7
ZNF707 zinc finger protein 707
ZSCAN25 zinc finger and SCAN domain containing 25

low expression

Symbol Name
PACRGL PARK2 co-regulated-like
PAIP1 poly(A) binding protein interacting protein 1
QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
SNX14 sorting nexin 14
TMEM128 transmembrane protein 128