Brain Lower Grade Glioma_LGG_TCGA-HT-7483-01A-11R-2027-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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323 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7483-01A-11R-2027-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABI1 abl-interactor 1
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
ACBD5 acyl-CoA binding domain containing 5
ALDH5A1 aldehyde dehydrogenase 5 family, member A1
ANKLE2 ankyrin repeat and LEM domain containing 2
ANKRD16 ankyrin repeat domain 16
ANKRD50 ankyrin repeat domain 50
ANXA6 annexin A6
AP2B1 adaptor-related protein complex 2, beta 1 subunit
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
ARG2 arginase 2
ARHGAP12 Rho GTPase activating protein 12
ARHGAP21 Rho GTPase activating protein 21
ARHGAP28 Rho GTPase activating protein 28
ARL5B ADP-ribosylation factor-like 5B
ARMCX3 armadillo repeat containing, X-linked 3
ARSG arylsulfatase G
ART5 ADP-ribosyltransferase 5
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
AVL9 AVL9 homolog (S. cerevisiase)
BCKDHA branched chain keto acid dehydrogenase E1, alpha polypeptide
BDNF brain-derived neurotrophic factor
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase)
BTBD17 BTB (POZ) domain containing 17
C10ORF131 chromosome 10 open reading frame 131
C1ORF105 chromosome 1 open reading frame 105
C1ORF94 chromosome 1 open reading frame 94
C1QTNF7 C1q and tumor necrosis factor related protein 7
C2ORF72 chromosome 2 open reading frame 72
C4ORF45 chromosome 4 open reading frame 45
CALCRL calcitonin receptor-like
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CCDC7 coiled-coil domain containing 7
CCDC80 coiled-coil domain containing 80
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CD1D CD1d molecule
CDC123 cell division cycle 123
CDC23 cell division cycle 23
CDH7 cadherin 7, type 2
CDNF cerebral dopamine neurotrophic factor
CGB2 chorionic gonadotropin, beta polypeptide 2
CIDEC cell death-inducing DFFA-like effector c
CLIC2 chloride intracellular channel 2
CLPTM1 cleft lip and palate associated transmembrane protein 1
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
COBLL1 cordon-bleu WH2 repeat protein-like 1
COMMD2 COMM domain containing 2
COX18 COX18 cytochrome c oxidase assembly factor
CPT2 carnitine palmitoyltransferase 2
CRAT carnitine O-acetyltransferase
CRHBP corticotropin releasing hormone binding protein
CS citrate synthase
CT45A1 cancer/testis antigen family 45, member A1
CT45A3 cancer/testis antigen family 45, member A3
CT62 cancer/testis antigen 62
CTCFL CCCTC-binding factor (zinc finger protein)-like
CTH cystathionine gamma-lyase
CTPS2 CTP synthase 2
CUL2 cullin 2
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
DAB2IP DAB2 interacting protein
DBT dihydrolipoamide branched chain transacylase E2
DCAF10 DDB1 and CUL4 associated factor 10
DCLRE1C DNA cross-link repair 1C
DDAH1 dimethylarginine dimethylaminohydrolase 1
DEPDC4 DEP domain containing 4
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
DOLK dolichol kinase
DPP10 dipeptidyl-peptidase 10 (non-functional)
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1
EFCAB13 EF-hand calcium binding domain 13
EFR3B EFR3 homolog B (S. cerevisiae)
ENO3 enolase 3 (beta, muscle)
ENOPH1 enolase-phosphatase 1
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM171A1 family with sequence similarity 171, member A1
FAM182A family with sequence similarity 182, member A
FAM26D family with sequence similarity 26, member D
FAM26E family with sequence similarity 26, member E
FBXO18 F-box protein, helicase, 18
FBXW12 F-box and WD repeat domain containing 12
FHDC1 FH2 domain containing 1
FILIP1 filamin A interacting protein 1
FMR1-AS1 FMR1 antisense RNA 1
FOXN3 forkhead box N3
FRG1B FSHD region gene 1 family, member B
FRMD4A FERM domain containing 4A
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2
GADL1 glutamate decarboxylase-like 1
GAPVD1 GTPase activating protein and VPS9 domains 1
GBP6 guanylate binding protein family, member 6
GDF9 growth differentiation factor 9
GDI2 GDP dissociation inhibitor 2
GFPT1 glutamine--fructose-6-phosphate transaminase 1
GJB4 gap junction protein, beta 4, 30.3kDa
GLE1 GLE1 RNA export mediator
GLT6D1 glycosyltransferase 6 domain containing 1
GLUD1 glutamate dehydrogenase 1
GLUD2 glutamate dehydrogenase 2
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
GOLGA1 golgin A1
GOLGA6A golgin A6 family, member A
GOLGA6B golgin A6 family, member B
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPR107 G protein-coupled receptor 107
GPR85 G protein-coupled receptor 85
GSG1 germ cell associated 1
GSTTP2 glutathione S-transferase theta pseudogene 2
GTPBP4 GTP binding protein 4
GZF1 GDNF-inducible zinc finger protein 1
HCRTR1 hypocretin (orexin) receptor 1
HMGB1 high mobility group box 1
HSPA14 heat shock 70kDa protein 14
HTR1F 5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled
IDI1 isopentenyl-diphosphate delta isomerase 1
IL31 interleukin 31
IMPACT impact RWD domain protein
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1
INHBC inhibin, beta C
ITGA9 integrin, alpha 9
KCMF1 potassium channel modulatory factor 1
KIAA1715 KIAA1715
KIF5B kinesin family member 5B
KIN Kin17 DNA and RNA binding protein
KLKP1 kallikrein pseudogene 1
KLLN killin, p53-regulated DNA replication inhibitor
KNOP1 lysine-rich nucleolar protein 1
KRT12 keratin 12, type I
KRTAP3-2 keratin associated protein 3-2
KRTAP5-6 keratin associated protein 5-6
LAMC2 laminin, gamma 2
LARP1B La ribonucleoprotein domain family, member 1B
LARP4B La ribonucleoprotein domain family, member 4B
LDHC lactate dehydrogenase C
LIN54 lin-54 DREAM MuvB core complex component
LINC00589 long intergenic non-protein coding RNA 589
LIX1L Lix1 homolog (chicken) like
LMOD3 leiomodin 3 (fetal)
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene
LOC284788 uncharacterized LOC284788
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC650293 seven transmembrane helix receptor
LRRC10B leucine rich repeat containing 10B
LRRC8C leucine rich repeat containing 8 family, member C
LRSAM1 leucine rich repeat and sterile alpha motif containing 1
LY6K lymphocyte antigen 6 complex, locus K
LYPD5 LY6/PLAUR domain containing 5
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
MAS1 MAS1 proto-oncogene, G protein-coupled receptor
MCUR1 mitochondrial calcium uniporter regulator 1
MEPE matrix extracellular phosphoglycoprotein
MESP2 mesoderm posterior basic helix-loop-helix transcription factor 2
MIA2 melanoma inhibitory activity 2
MIB1 mindbomb E3 ubiquitin protein ligase 1
MICU1 mitochondrial calcium uptake 1
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MOB4 MOB family member 4, phocein
MRPL19 mitochondrial ribosomal protein L19
MSRB2 methionine sulfoxide reductase B2
MTCH2 mitochondrial carrier 2
N4BP2L2 NEDD4 binding protein 2-like 2
NBPF3 neuroblastoma breakpoint family, member 3
NCKAP1 NCK-associated protein 1
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
NEU2 sialidase 2 (cytosolic sialidase)
NLGN4Y neuroligin 4, Y-linked
NMB neuromedin B
NMD3 NMD3 ribosome export adaptor
NMT2 N-myristoyltransferase 2
NMU neuromedin U
NNT nicotinamide nucleotide transhydrogenase
NOMO2 NODAL modulator 2
NRAP nebulin-related anchoring protein
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OR10J3 olfactory receptor, family 10, subfamily J, member 3
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OSTN osteocrin
PANX3 pannexin 3
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDH11X protocadherin 11 X-linked
PCDH11Y protocadherin 11 Y-linked
PCDH7 protocadherin 7
PCDHB8 protocadherin beta 8
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGB2 protocadherin gamma subfamily B, 2
PCYOX1 prenylcysteine oxidase 1
PDCL phosducin-like
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PENK proenkephalin
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PGAM5 phosphoglycerate mutase family member 5
PGM3 phosphoglucomutase 3
PHOX2A paired-like homeobox 2a
PHYH phytanoyl-CoA 2-hydroxylase
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PITRM1 pitrilysin metallopeptidase 1
PKDREJ polycystin (PKD) family receptor for egg jelly
PLAA phospholipase A2-activating protein
PLCD4 phospholipase C, delta 4
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
PMPCA peptidase (mitochondrial processing) alpha
PNOC prepronociceptin
PPA2 pyrophosphatase (inorganic) 2
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma
PPP6C protein phosphatase 6, catalytic subunit
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PRMT9 protein arginine methyltransferase 9
PRPF18 pre-mRNA processing factor 18
PRTFDC1 phosphoribosyl transferase domain containing 1
PTP4A1 protein tyrosine phosphatase type IVA, member 1
PTPRA protein tyrosine phosphatase, receptor type, A
PTPRG protein tyrosine phosphatase, receptor type, G
RAB14 RAB14, member RAS oncogene family
RAB18 RAB18, member RAS oncogene family
RAB8B RAB8B, member RAS oncogene family
RABGAP1 RAB GTPase activating protein 1
RAD21L1 RAD21-like 1 (S. pombe)
RAET1L retinoic acid early transcript 1L
RC3H2 ring finger and CCCH-type domains 2
RGSL1 regulator of G-protein signaling like 1
RNF182 ring finger protein 182
RNF39 ring finger protein 39
RPA2 replication protein A2, 32kDa
RPL3L ribosomal protein L3-like
RRAGB Ras-related GTP binding B
RSU1 Ras suppressor protein 1
SAR1A secretion associated, Ras related GTPase 1A
SCO1 SCO1 cytochrome c oxidase assembly protein
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
SEC16A SEC16 homolog A (S. cerevisiae)
SELE selectin E
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SEPHS1 selenophosphate synthetase 1
SERINC5 serine incorporator 5
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
SESTD1 SEC14 and spectrin domains 1
SET SET nuclear proto-oncogene
SETBP1 SET binding protein 1
SH3RF2 SH3 domain containing ring finger 2
SIKE1 suppressor of IKBKE 1
SLC16A14 solute carrier family 16, member 14
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC25A47 solute carrier family 25, member 47
SLC30A2 solute carrier family 30 (zinc transporter), member 2
SLC35E4 solute carrier family 35, member E4
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SLITRK6 SLIT and NTRK-like family, member 6
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
SMURF2 SMAD specific E3 ubiquitin protein ligase 2
SOX7 SRY (sex determining region Y)-box 7
SP7 Sp7 transcription factor
SPON1 spondin 1, extracellular matrix protein
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STX12 syntaxin 12
STX17 syntaxin 17
SUGCT succinyl-CoA:glutarate-CoA transferase
SURF4 surfeit 4
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila)
SYTL5 synaptotagmin-like 5
TAC1 tachykinin, precursor 1
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
TAS2R60 taste receptor, type 2, member 60
TAS2R8 taste receptor, type 2, member 8
TATDN3 TatD DNase domain containing 3
TCP11 t-complex 11, testis-specific
TFAM transcription factor A, mitochondrial
TGM6 transglutaminase 6
THNSL1 threonine synthase-like 1 (S. cerevisiae)
THSD4 thrombospondin, type I, domain containing 4
TIGD7 tigger transposable element derived 7
TM4SF18 transmembrane 4 L six family member 18
TM4SF20 transmembrane 4 L six family member 20
TMEM106B transmembrane protein 106B
TOR1A torsin family 1, member A (torsin A)
TRDMT1 tRNA aspartic acid methyltransferase 1
TRIM33 tripartite motif containing 33
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae)
TTF1 transcription termination factor, RNA polymerase I
TTTY23 testis-specific transcript, Y-linked 23 (non-protein coding)
UBA2 ubiquitin-like modifier activating enzyme 2
UBE2E1 ubiquitin-conjugating enzyme E2E 1
UBE2J1 ubiquitin-conjugating enzyme E2, J1
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
UPP2 uridine phosphorylase 2
USP3 ubiquitin specific peptidase 3
USP6NL USP6 N-terminal like
WAC WW domain containing adaptor with coiled-coil
WDFY1 WD repeat and FYVE domain containing 1
WDR31 WD repeat domain 31
WDR37 WD repeat domain 37
WFDC5 WAP four-disulfide core domain 5
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
YME1L1 YME1-like 1 ATPase
ZAR1L zygote arrest 1-like
ZBTB43 zinc finger and BTB domain containing 43
ZBTB6 zinc finger and BTB domain containing 6
ZFP82 ZFP82 zinc finger protein
ZMYND11 zinc finger, MYND-type containing 11
ZNF10 zinc finger protein 10
ZNF225 zinc finger protein 225
ZNF234 zinc finger protein 234
ZNF235 zinc finger protein 235
ZNF410 zinc finger protein 410
ZNF483 zinc finger protein 483
ZNF569 zinc finger protein 569
ZNF592 zinc finger protein 592
ZNF605 zinc finger protein 605
ZNF770 zinc finger protein 770
ZNF81 zinc finger protein 81
ZNF843 zinc finger protein 843

low expression

Symbol Name
COMMD5 COMM domain containing 5
NKAPP1 NFKB activating protein pseudogene 1
ZDHHC6 zinc finger, DHHC-type containing 6
ZFP3 ZFP3 zinc finger protein