Brain Lower Grade Glioma_LGG_TCGA-P5-A5EV-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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243 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A5EV-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAR2 AAR2 splicing factor homolog (S. cerevisiae)
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2
ABHD11 abhydrolase domain containing 11
ACAT1 acetyl-CoA acetyltransferase 1
ACBD7 acyl-CoA binding domain containing 7
ACKR3 atypical chemokine receptor 3
ACYP2 acylphosphatase 2, muscle type
AGK acylglycerol kinase
AHCYL2 adenosylhomocysteinase-like 2
AKR1A1 aldo-keto reductase family 1, member A1 (aldehyde reductase)
AKR1C3 aldo-keto reductase family 1, member C3
AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH4A1 aldehyde dehydrogenase 4 family, member A1
ANXA8L1 annexin A8-like 1
APMAP adipocyte plasma membrane associated protein
APOO apolipoprotein O
ARSG arylsulfatase G
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
ATP5F1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
ATP6V0E2 ATPase, H+ transporting V0 subunit e2
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
BPHL biphenyl hydrolase-like (serine hydrolase)
BTNL2 butyrophilin-like 2
C15ORF32 chromosome 15 open reading frame 32
C15ORF61 chromosome 15 open reading frame 61
C1ORF122 chromosome 1 open reading frame 122
C20ORF24 chromosome 20 open reading frame 24
C2ORF54 chromosome 2 open reading frame 54
C7ORF66 chromosome 7 open reading frame 66
C8A complement component 8, alpha polypeptide
CA5B carbonic anhydrase VB, mitochondrial
CEP250 centrosomal protein 250kDa
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CHDH choline dehydrogenase
CHST5 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
CIT citron rho-interacting serine/threonine kinase
CLYBL citrate lyase beta like
COG2 component of oligomeric golgi complex 2
COQ10A coenzyme Q10 homolog A (S. cerevisiae)
COQ9 coenzyme Q9
CPT2 carnitine palmitoyltransferase 2
CRADD CASP2 and RIPK1 domain containing adaptor with death domain
CRAT carnitine O-acetyltransferase
CUX1 cut-like homeobox 1
CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2
DDB1 damage-specific DNA binding protein 1, 127kDa
DERA deoxyribose-phosphate aldolase (putative)
DFNA5 deafness, autosomal dominant 5
DLD dihydrolipoamide dehydrogenase
DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30
DPY19L2P4 DPY19L2 pseudogene 4
DTNBP1 dystrobrevin binding protein 1
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
DUSP19 dual specificity phosphatase 19
EAF2 ELL associated factor 2
EBF1 early B-cell factor 1
EIF4H eukaryotic translation initiation factor 4H
ESRRA estrogen-related receptor alpha
ESX1 ESX homeobox 1
ETFA electron-transfer-flavoprotein, alpha polypeptide
ETNPPL ethanolamine-phosphate phospho-lyase
F9 coagulation factor IX
FAM92A1P2 family with sequence similarity 92, member A3
FASTKD1 FAST kinase domains 1
FLJ45079 FLJ45079 protein
FNDC5 fibronectin type III domain containing 5
FOXQ1 forkhead box Q1
GABRG1 gamma-aminobutyric acid (GABA) A receptor, gamma 1
GAGE2D G antigen 2D
GALNS galactosamine (N-acetyl)-6-sulfatase
GCAT glycine C-acetyltransferase
GDF11 growth differentiation factor 11
GPR101 G protein-coupled receptor 101
GPR85 G protein-coupled receptor 85
GPSM2 G-protein signaling modulator 2
GSDMC gasdermin C
GTF2I general transcription factor IIi
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
GZF1 GDNF-inducible zinc finger protein 1
HADH hydroxyacyl-CoA dehydrogenase
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HIST1H2AC histone cluster 1, H2ac
HIST1H2BO histone cluster 1, H2bo
HOMEZ homeobox and leucine zipper encoding
HOXB7 homeobox B7
HPS5 Hermansky-Pudlak syndrome 5
IL17D interleukin 17D
IL31 interleukin 31
INSL6 insulin-like 6
IVD isovaleryl-CoA dehydrogenase
KCNH2 potassium channel, voltage gated eag related subfamily H, member 2
KIAA0391 KIAA0391
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
KIZ kizuna centrosomal protein
KLRF1 killer cell lectin-like receptor subfamily F, member 1
KRT73 keratin 73, type II
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LCE4A late cornified envelope 4A
LDHB lactate dehydrogenase B
LINC00301 long intergenic non-protein coding RNA 301
LOC642929 general transcription factor II, i pseudogene
LRFN3 leucine rich repeat and fibronectin type III domain containing 3
LRP3 low density lipoprotein receptor-related protein 3
MANBAL mannosidase, beta A, lysosomal-like
MANEAL mannosidase, endo-alpha-like
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MCUR1 mitochondrial calcium uniporter regulator 1
MDH2 malate dehydrogenase 2, NAD (mitochondrial)
MECR mitochondrial trans-2-enoyl-CoA reductase
MED9 mediator complex subunit 9
METTL9 methyltransferase like 9
MGC16142 uncharacterized protein MGC16142
MKKS McKusick-Kaufman syndrome
MLYCD malonyl-CoA decarboxylase
MMP28 matrix metallopeptidase 28
MROH8 maestro heat-like repeat family member 8
MXD4 MAX dimerization protein 4
MYH15 myosin, heavy chain 15
NANP N-acetylneuraminic acid phosphatase
NDP Norrie disease (pseudoglioma)
NELFCD negative elongation factor complex member C/D
NFS1 NFS1 cysteine desulfurase
NMB neuromedin B
NOMO2 NODAL modulator 2
NOMO3 NODAL modulator 3
NPVF neuropeptide VF precursor
OAZ3 ornithine decarboxylase antizyme 3
OOEP oocyte expressed protein
OR10A5 olfactory receptor, family 10, subfamily A, member 5
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR6K3 olfactory receptor, family 6, subfamily K, member 3
PAGE1 P antigen family, member 1 (prostate associated)
PARP3 poly (ADP-ribose) polymerase family, member 3
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGB5 protocadherin gamma subfamily B, 5
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PDHB pyruvate dehydrogenase (lipoamide) beta
PEX10 peroxisomal biogenesis factor 10
PEX19 peroxisomal biogenesis factor 19
PFKM phosphofructokinase, muscle
PGM1 phosphoglucomutase 1
PIGV phosphatidylinositol glycan anchor biosynthesis, class V
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
PNPLA8 patatin-like phospholipase domain containing 8
POLR3B polymerase (RNA) III (DNA directed) polypeptide B
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
POMZP3 POM121 and ZP3 fusion
PON1 paraoxonase 1
PON2 paraoxonase 2
POR P450 (cytochrome) oxidoreductase
PRDX2 peroxiredoxin 2
PYGB phosphorylase, glycogen; brain
QRFPR pyroglutamylated RFamide peptide receptor
RASL10B RAS-like, family 10, member B
RBM48 RNA binding motif protein 48
REC8 REC8 meiotic recombination protein
REG3G regenerating islet-derived 3 gamma
REPIN1 replication initiator 1
RSG1 REM2 and RAB-like small GTPase 1
SAMD13 sterile alpha motif domain containing 13
SDCBP2 syndecan binding protein (syntenin) 2
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SELL selectin L
SERP1 stress-associated endoplasmic reticulum protein 1
SHPK sedoheptulokinase
SIMC1 SUMO-interacting motifs containing 1
SLC25A11 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SNORA16A small nucleolar RNA, H/ACA box 16A
SNX7 sorting nexin 7
SPANXA2 SPANX family, member A2
SPATA16 spermatogenesis associated 16
SSTR5 somatostatin receptor 5
SSX4 synovial sarcoma, X breakpoint 4
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit
SUOX sulfite oxidase
SYPL2 synaptophysin-like 2
TACO1 translational activator of mitochondrially encoded cytochrome c oxidase I
TAOK2 TAO kinase 2
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TAS2R8 taste receptor, type 2, member 8
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TMEM135 transmembrane protein 135
TMEM257 transmembrane protein 257
TMEM263 transmembrane protein 263
TMEM41A transmembrane protein 41A
TNPO2 transportin 2
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like
TP53TG1 TP53 target 1 (non-protein coding)
TSC22D4 TSC22 domain family, member 4
TSPAN11 tetraspanin 11
UBE2D1 ubiquitin-conjugating enzyme E2D 1
UFSP1 UFM1-specific peptidase 1 (non-functional)
UNC45B unc-45 homolog B (C. elegans)
UNC93A unc-93 homolog A (C. elegans)
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
VEGFB vascular endothelial growth factor B
VPS37D vacuolar protein sorting 37 homolog D (S. cerevisiae)
VWC2 von Willebrand factor C domain containing 2
WBSCR16 Williams-Beuren syndrome chromosome region 16
ZC3HC1 zinc finger, C3HC-type containing 1
ZFAT-AS1 ZFAT antisense RNA 1
ZNF208 zinc finger protein 208
ZNF385A zinc finger protein 385A
ZNF703 zinc finger protein 703
ZSWIM5 zinc finger, SWIM-type containing 5

low expression

Symbol Name
ATG5 autophagy related 5
BECN1 beclin 1, autophagy related
C17ORF75 chromosome 17 open reading frame 75
CBX1 chromobox homolog 1
CCDC43 coiled-coil domain containing 43
CDC27 cell division cycle 27
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
GOSR1 golgi SNAP receptor complex member 1
LOC642852 uncharacterized LOC642852
MSL1 male-specific lethal 1 homolog (Drosophila)
NSRP1 nuclear speckle splicing regulatory protein 1
PEX3 peroxisomal biogenesis factor 3
PHF12 PHD finger protein 12
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
RAB5C RAB5C, member RAS oncogene family
SENP6 SUMO1/sentrin specific peptidase 6
SLC46A1 solute carrier family 46 (folate transporter), member 1
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae)
TMEM199 transmembrane protein 199
TMUB2 transmembrane and ubiquitin-like domain containing 2
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial)