Brain Lower Grade Glioma_LGG_TCGA-P5-A730-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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383 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A730-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABHD14B abhydrolase domain containing 14B
ABLIM3 actin binding LIM protein family, member 3
ACBD4 acyl-CoA binding domain containing 4
ACVR1 activin A receptor, type I
ADCK3 aarF domain containing kinase 3
ADCY4 adenylate cyclase 4
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
AKAP1 A kinase (PRKA) anchor protein 1
ANGPTL2 angiopoietin-like 2
ANKRD37 ankyrin repeat domain 37
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA13 annexin A13
APIP APAF1 interacting protein
APP amyloid beta (A4) precursor protein
ARG2 arginase 2
ARHGAP10 Rho GTPase activating protein 10
ARHGAP24 Rho GTPase activating protein 24
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa
ARRDC3 arrestin domain containing 3
ASIC4 acid sensing (proton gated) ion channel family member 4
ASIC5 acid sensing (proton gated) ion channel family member 5
ASTN2 astrotactin 2
ATP8B3 ATPase, aminophospholipid transporter, class I, type 8B, member 3
BAG6 BCL2-associated athanogene 6
BBS2 Bardet-Biedl syndrome 2
BEST1 bestrophin 1
BMP2 bone morphogenetic protein 2
C10ORF113 chromosome 10 open reading frame 113
C10ORF131 chromosome 10 open reading frame 131
C14ORF28 chromosome 14 open reading frame 28
C1ORF43 chromosome 1 open reading frame 43
C22ORF42 chromosome 22 open reading frame 42
C2ORF47 chromosome 2 open reading frame 47
C2ORF69 chromosome 2 open reading frame 69
C6ORF10 chromosome 6 open reading frame 10
C6ORF58 chromosome 6 open reading frame 58
C9ORF85 chromosome 9 open reading frame 85
CALHM2 calcium homeostasis modulator 2
CBLC Cbl proto-oncogene C, E3 ubiquitin protein ligase
CCDC127 coiled-coil domain containing 127
CCDC59 coiled-coil domain containing 59
CCDC83 coiled-coil domain containing 83
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
CDKL3 cyclin-dependent kinase-like 3
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDSN corneodesmosin
CES3 carboxylesterase 3
CES5A carboxylesterase 5A
CETN3 centrin, EF-hand protein, 3
CFL2 cofilin 2 (muscle)
CHMP2B charged multivesicular body protein 2B
CHMP5 charged multivesicular body protein 5
CHPF chondroitin polymerizing factor
CIR1 corepressor interacting with RBPJ, 1
CISD1 CDGSH iron sulfur domain 1
CLCA2 chloride channel accessory 2
CLCN1 chloride channel, voltage-sensitive 1
CLCNKB chloride channel, voltage-sensitive Kb
CNTNAP4 contactin associated protein-like 4
COBLL1 cordon-bleu WH2 repeat protein-like 1
COPS2 COP9 signalosome subunit 2
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
CPEB1 cytoplasmic polyadenylation element binding protein 1
CRCT1 cysteine-rich C-terminal 1
CRNN cornulin
CRTAP cartilage associated protein
CRTC3 CREB regulated transcription coactivator 3
CRY2 cryptochrome circadian clock 2
CRYAB crystallin, alpha B
CSN2 casein beta
CSNK2A2 casein kinase 2, alpha prime polypeptide
CSRP2 cysteine and glycine-rich protein 2
CST9 cystatin 9 (testatin)
CT45A1 cancer/testis antigen family 45, member A1
CT45A3 cancer/testis antigen family 45, member A3
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1
CYSTM1 cysteine-rich transmembrane module containing 1
CYYR1 cysteine/tyrosine-rich 1
DCAF8L2 DDB1 and CUL4 associated factor 8-like 2
DCST1 DC-STAMP domain containing 1
DEFA6 defensin, alpha 6, Paneth cell-specific
DEFB103B defensin, beta 103B
DEFB4A defensin, beta 4A
DESI1 desumoylating isopeptidase 1
DMBT1 deleted in malignant brain tumors 1
DNAJC12 DnaJ (Hsp40) homolog, subfamily C, member 12
DPF2 D4, zinc and double PHD fingers family 2
DPPA3 developmental pluripotency associated 3
DUOX1 dual oxidase 1
EEF1B2 eukaryotic translation elongation factor 1 beta 2
EIF1 eukaryotic translation initiation factor 1
EIF1AY eukaryotic translation initiation factor 1A, Y-linked
ELOVL7 ELOVL fatty acid elongase 7
ELSPBP1 epididymal sperm binding protein 1
ENDOD1 endonuclease domain containing 1
FAM102A family with sequence similarity 102, member A
FAM131C family with sequence similarity 131, member C
FAM83A family with sequence similarity 83, member A
FAM83C family with sequence similarity 83, member C
FBXO32 F-box protein 32
FGFBP1 fibroblast growth factor binding protein 1
FLCN folliculin
FLJ41941 uncharacterized LOC100192420
FMO4 flavin containing monooxygenase 4
FNIP1 folliculin interacting protein 1
FOXF2 forkhead box F2
FOXL2NB FOXL2 neighbor
FOXN1 forkhead box N1
FRA10AC1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
FST follistatin
FXR1 fragile X mental retardation, autosomal homolog 1
GALK2 galactokinase 2
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GAST gastrin
GDF10 growth differentiation factor 10
GFPT2 glutamine-fructose-6-phosphate transaminase 2
GIMAP7 GTPase, IMAP family member 7
GIN1 gypsy retrotransposon integrase 1
GLIPR2 GLI pathogenesis-related 2
GMPR2 guanosine monophosphate reductase 2
GNPDA1 glucosamine-6-phosphate deaminase 1
GOLGA6C golgin A6 family, member C
GORAB golgin, RAB6-interacting
GPR19 G protein-coupled receptor 19
GSTO2 glutathione S-transferase omega 2
H1F0 H1 histone family, member 0
HAP1 huntingtin-associated protein 1
HCG27 HLA complex group 27 (non-protein coding)
HHATL hedgehog acyltransferase-like
HMSD histocompatibility (minor) serpin domain containing
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9)
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
HTR3C 5-hydroxytryptamine (serotonin) receptor 3C, ionotropic
IL11RA interleukin 11 receptor, alpha
IL33 interleukin 33
IL36G interleukin 36, gamma
IL36RN interleukin 36 receptor antagonist
ILK integrin-linked kinase
INVS inversin
IVL involucrin
KCNIP2 Kv channel interacting protein 2
KDM3A lysine (K)-specific demethylase 3A
KDSR 3-ketodihydrosphingosine reductase
KLK12 kallikrein-related peptidase 12
KLK9 kallikrein-related peptidase 9
KRT14 keratin 14, type I
KRT16 keratin 16, type I
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
KRTAP1-3 keratin associated protein 1-3
KRTAP21-2 keratin associated protein 21-2
KRTDAP keratinocyte differentiation-associated protein
LAMP2 lysosomal-associated membrane protein 2
LARP6 La ribonucleoprotein domain family, member 6
LCE3D late cornified envelope 3D
LCE3E late cornified envelope 3E
LENEP lens epithelial protein
LHFPL3 lipoma HMGIC fusion partner-like 3
LIN54 lin-54 DREAM MuvB core complex component
LINC00032 long intergenic non-protein coding RNA 32
LINC00323 long intergenic non-protein coding RNA 323
LINC01011 long intergenic non-protein coding RNA 1011
LIPT1 lipoyltransferase 1
LMOD1 leiomodin 1 (smooth muscle)
LOC100268168 uncharacterized LOC100268168
LOC145783 uncharacterized LOC145783
LOC728554 THO complex 3 pseudogene
LONRF1 LON peptidase N-terminal domain and ring finger 1
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LSMEM2 leucine-rich single-pass membrane protein 2
LTA4H leukotriene A4 hydrolase
LYPD3 LY6/PLAUR domain containing 3
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEA8 melanoma antigen family A8
MANBA mannosidase, beta A, lysosomal
MATN2 matrilin 2
MCHR1 melanin-concentrating hormone receptor 1
METAP2 methionyl aminopeptidase 2
METTL15 methyltransferase like 15
MKL1 megakaryoblastic leukemia (translocation) 1
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MORF4 mortality factor 4 (pseudogene)
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
MREG melanoregulin
MRPL1 mitochondrial ribosomal protein L1
MRPL10 mitochondrial ribosomal protein L10
MRPS18B mitochondrial ribosomal protein S18B
MRPS27 mitochondrial ribosomal protein S27
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MUC21 mucin 21, cell surface associated
MUC7 mucin 7, secreted
MXI1 MAX interactor 1, dimerization protein
MYLK2 myosin light chain kinase 2
NAGLU N-acetylglucosaminidase, alpha
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
NEU1 sialidase 1 (lysosomal sialidase)
NFX1 nuclear transcription factor, X-box binding 1
NKAP NFKB activating protein
NMD3 NMD3 ribosome export adaptor
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NOTCH2NL notch 2 N-terminal like
NOV nephroblastoma overexpressed
NRBF2 nuclear receptor binding factor 2
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
NUP210L nucleoporin 210kDa-like
OR10H4 olfactory receptor, family 10, subfamily H, member 4
OR10V1 olfactory receptor, family 10, subfamily V, member 1
OR10W1 olfactory receptor, family 10, subfamily W, member 1
OR13C9 olfactory receptor, family 13, subfamily C, member 9
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR2T5 olfactory receptor, family 2, subfamily T, member 5
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR4C46 olfactory receptor, family 4, subfamily C, member 46
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OSER1 oxidative stress responsive serine-rich 1
OXNAD1 oxidoreductase NAD-binding domain containing 1
OXSM 3-oxoacyl-ACP synthase, mitochondrial
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
PADI3 peptidyl arginine deiminase, type III
PARP2 poly (ADP-ribose) polymerase 2
PATE4 prostate and testis expressed 4
PATL1 protein associated with topoisomerase II homolog 1 (yeast)
PBDC1 polysaccharide biosynthesis domain containing 1
PCDHA1 protocadherin alpha 1
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA3 protocadherin gamma subfamily A, 3
PDHX pyruvate dehydrogenase complex, component X
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PDZD9 PDZ domain containing 9
PECR peroxisomal trans-2-enoyl-CoA reductase
PGLYRP4 peptidoglycan recognition protein 4
PHF19 PHD finger protein 19
PI3 peptidase inhibitor 3, skin-derived
PIGC phosphatidylinositol glycan anchor biosynthesis, class C
PIGP phosphatidylinositol glycan anchor biosynthesis, class P
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLEKHG4 pleckstrin homology domain containing, family G (with RhoGef domain) member 4
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1
POC5 POC5 centriolar protein
PODN podocan
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PPA2 pyrophosphatase (inorganic) 2
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R3E protein phosphatase 1, regulatory subunit 3E
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PRCP prolylcarboxypeptidase (angiotensinase C)
PRPS1 phosphoribosyl pyrophosphate synthetase 1
PRR30 proline rich 30
PRSS23 protease, serine, 23
PRUNE2 prune homolog 2 (Drosophila)
PSG3 pregnancy specific beta-1-glycoprotein 3
PTCHD3 patched domain containing 3
PTGR2 prostaglandin reductase 2
RAB19 RAB19, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RBM11 RNA binding motif protein 11
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
RCL1 RNA terminal phosphate cyclase-like 1
RILPL1 Rab interacting lysosomal protein-like 1
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae)
RNASE7 ribonuclease, RNase A family, 7
RNF113A ring finger protein 113A
RPL31 ribosomal protein L31
RPS4Y1 ribosomal protein S4, Y-linked 1
RRAGB Ras-related GTP binding B
RRAGD Ras-related GTP binding D
RSAD1 radical S-adenosyl methionine domain containing 1
RSRC2 arginine/serine-rich coiled-coil 2
RUFY3 RUN and FYVE domain containing 3
S100A7 S100 calcium binding protein A7
S100A7A S100 calcium binding protein A7A
SCCPDH saccharopine dehydrogenase (putative)
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDHAF4 succinate dehydrogenase complex assembly factor 4
SEC22C SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
SFR1 SWI5-dependent recombination repair 1
SFT2D1 SFT2 domain containing 1
SFTA2 surfactant associated 2
SFTPA2 surfactant protein A2
SFXN3 sideroflexin 3
SHC2 SHC (Src homology 2 domain containing) transforming protein 2
SHF Src homology 2 domain containing F
SIDT2 SID1 transmembrane family, member 2
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC16A9 solute carrier family 16, member 9
SLC22A24 solute carrier family 22, member 24
SLC22A25 solute carrier family 22, member 25
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC39A2 solute carrier family 39 (zinc transporter), member 2
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SLURP1 secreted LY6/PLAUR domain containing 1
SMG7 SMG7 nonsense mediated mRNA decay factor
SMN2 survival of motor neuron 2, centromeric
SMYD3 SET and MYND domain containing 3
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA77 small nucleolar RNA, H/ACA box 77
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SPANXA2 SPANX family, member A2
SPATA12 spermatogenesis associated 12
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
SPRR1A small proline-rich protein 1A
SPRR1B small proline-rich protein 1B
SPRR2A small proline-rich protein 2A
SPRR2B small proline-rich protein 2B
SPRR2C small proline-rich protein 2C (pseudogene)
SPRR2D small proline-rich protein 2D
SPRR2E small proline-rich protein 2E
SPRR2F small proline-rich protein 2F
SPRR2G small proline-rich protein 2G
SPRR3 small proline-rich protein 3
SPRR4 small proline-rich protein 4
SPTSSB serine palmitoyltransferase, small subunit B
ST18 suppression of tumorigenicity 18, zinc finger
STAMBP STAM binding protein
STATH statherin
STX3 syntaxin 3
SUCLG1 succinate-CoA ligase, alpha subunit
SUSD4 sushi domain containing 4
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TANGO2 transport and golgi organization 2 homolog (Drosophila)
TARP TCR gamma alternate reading frame protein
TAS2R39 taste receptor, type 2, member 39
TBC1D15 TBC1 domain family, member 15
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TBX22 T-box 22
TDGF1 teratocarcinoma-derived growth factor 1
TEX19 testis expressed 19
TIMP2 TIMP metallopeptidase inhibitor 2
TINAGL1 tubulointerstitial nephritis antigen-like 1
TMCO6 transmembrane and coiled-coil domains 6
TMEM126B transmembrane protein 126B
TMEM55A transmembrane protein 55A
TMEM82 transmembrane protein 82
TMPRSS5 transmembrane protease, serine 5
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10
TOPAZ1 testis and ovary specific PAZ domain containing 1
TRAP1 TNF receptor-associated protein 1
TRIML2 tripartite motif family-like 2
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
TRPM6 transient receptor potential cation channel, subfamily M, member 6
TSPAN1 tetraspanin 1
TSPAN3 tetraspanin 3
TYW5 tRNA-yW synthesizing protein 5
UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1
UBE2E1 ubiquitin-conjugating enzyme E2E 1
UGT1A7 UDP glucuronosyltransferase 1 family, polypeptide A7
VDAC2 voltage-dependent anion channel 2
VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
WDR5B WD repeat domain 5B
WDR87 WD repeat domain 87
WFDC5 WAP four-disulfide core domain 5
YPEL4 yippee-like 4 (Drosophila)
ZBED8 zinc finger, BED-type containing 8
ZBTB47 zinc finger and BTB domain containing 47
ZFP1 ZFP1 zinc finger protein
ZFYVE19 zinc finger, FYVE domain containing 19
ZG16B zymogen granule protein 16B
ZMAT2 zinc finger, matrin-type 2
ZNF330 zinc finger protein 330
ZNF512 zinc finger protein 512
ZNF654 zinc finger protein 654

low expression

Symbol Name
C7ORF43 chromosome 7 open reading frame 43
STX18 syntaxin 18