Brain Lower Grade Glioma_LGG_TCGA-P5-A77X-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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282 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A77X-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD17C abhydrolase domain containing 17C
ADAL adenosine deaminase-like
ADGRG4 adhesion G protein-coupled receptor G4
AGTR2 angiotensin II receptor, type 2
AHI1 Abelson helper integration site 1
AKAP9 A kinase (PRKA) anchor protein 9
ANGPTL3 angiopoietin-like 3
ANKAR ankyrin and armadillo repeat containing
APC adenomatous polyposis coli
ARL17A ADP-ribosylation factor-like 17A
ARMT1 acidic residue methyltransferase 1
ASCL3 achaete-scute family bHLH transcription factor 3
ASF1A anti-silencing function 1A histone chaperone
ATG12 autophagy related 12
ATP6V1G2 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
ATXN10 ataxin 10
BBIP1 BBSome interacting protein 1
BCAR4 breast cancer anti-estrogen resistance 4 (non-protein coding)
BCCIP BRCA2 and CDKN1A interacting protein
BIRC6 baculoviral IAP repeat containing 6
BLM Bloom syndrome, RecQ helicase-like
BRDT bromodomain, testis-specific
C10ORF62 chromosome 10 open reading frame 62
C11ORF65 chromosome 11 open reading frame 65
C1ORF27 chromosome 1 open reading frame 27
C21ORF62-AS1 C21orf62 antisense RNA 1
C22ORF39 chromosome 22 open reading frame 39
C3P1 complement component 3 precursor pseudogene
CACNG2 calcium channel, voltage-dependent, gamma subunit 2
CACYBP calcyclin binding protein
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle)
CATSPER3 cation channel, sperm associated 3
CCAR1 cell division cycle and apoptosis regulator 1
CCDC117 coiled-coil domain containing 117
CCDC7 coiled-coil domain containing 7
CDKL3 cyclin-dependent kinase-like 3
CEP290 centrosomal protein 290kDa
CHMP5 charged multivesicular body protein 5
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CLEC4F C-type lectin domain family 4, member F
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1
COA5 cytochrome c oxidase assembly factor 5
CORIN corin, serine peptidase
CPO carboxypeptidase O
CST9 cystatin 9 (testatin)
CXORF57 chromosome X open reading frame 57
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DEFB131 defensin, beta 131
DNAH7 dynein, axonemal, heavy chain 7
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DST dystonin
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
EAF2 ELL associated factor 2
EBF1 early B-cell factor 1
EGFEM1P EGF-like and EMI domain containing 1, pseudogene
ENDOU endonuclease, polyU-specific
ERI2 ERI1 exoribonuclease family member 2
ESR1 estrogen receptor 1
ESRRG estrogen-related receptor gamma
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM133A family with sequence similarity 133, member A
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM153A family with sequence similarity 153, member A
FAM153C family with sequence similarity 153, member C, pseudogene
FAM157A family with sequence similarity 157, member A
FAM186A family with sequence similarity 186, member A
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FBXO3 F-box protein 3
FLJ42627 uncharacterized LOC645644
FUNDC1 FUN14 domain containing 1
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GKAP1 G kinase anchoring protein 1
GNPDA2 glucosamine-6-phosphate deaminase 2
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GOLGA8DP golgin A8 family, member D, pseudogene
GOLGB1 golgin B1
GRIK1-AS1 GRIK1 antisense RNA 1
GRM6 glutamate receptor, metabotropic 6
GSTTP1 glutathione S-transferase theta pseudogene 1
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
GUCA2B guanylate cyclase activator 2B (uroguanylin)
H2BFM H2B histone family, member M
HCG4B HLA complex group 4B (non-protein coding)
HMGN5 high mobility group nucleosome binding domain 5
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HRSP12 heat-responsive protein 12
HSD17B6 hydroxysteroid (17-beta) dehydrogenase 6
INO80D INO80 complex subunit D
INTU inturned planar cell polarity protein
IQCA1 IQ motif containing with AAA domain 1
KANK3 KN motif and ankyrin repeat domains 3
KATNBL1 katanin p80 subunit B-like 1
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16
KCTD4 potassium channel tetramerization domain containing 4
KIAA1456 KIAA1456
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
KRTAP10-1 keratin associated protein 10-1
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LIN28A lin-28 homolog A (C. elegans)
LINC00032 long intergenic non-protein coding RNA 32
LINC00575 long intergenic non-protein coding RNA 575
LINC00597 long intergenic non-protein coding RNA 597
LMO3 LIM domain only 3 (rhombotin-like 2)
LOC145474 uncharacterized LOC145474
LOC285627 uncharacterized LOC285627
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC400927 TPTE and PTEN homologous inositol lipid phosphatase pseudogene
LOC441454 prothymosin, alpha pseudogene
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
LRP1B low density lipoprotein receptor-related protein 1B
LRRC37A leucine rich repeat containing 37A
LUC7L3 LUC7-like 3 (S. cerevisiae)
LVRN laeverin
MCF2 MCF.2 cell line derived transforming sequence
MCTS1 malignant T cell amplified sequence 1
MDN1 MDN1, midasin homolog (yeast)
METTL15 methyltransferase like 15
METTL21A methyltransferase like 21A
MIAT myocardial infarction associated transcript (non-protein coding)
MIR99AHG mir-99a-let-7c cluster host gene
MOCS2 molybdenum cofactor synthesis 2
MRO maestro
MRPS25 mitochondrial ribosomal protein S25
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase
MYH15 myosin, heavy chain 15
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative)
NANOG Nanog homeobox
NAP1L3 nucleosome assembly protein 1-like 3
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
NF2 neurofibromin 2 (merlin)
NFYA nuclear transcription factor Y, alpha
NFYB nuclear transcription factor Y, beta
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
NINL ninein-like
NKAP NFKB activating protein
NLRP5 NLR family, pyrin domain containing 5
NOX5 NADPH oxidase, EF-hand calcium binding domain 5
NT5C1B 5'-nucleotidase, cytosolic IB
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
NUP210L nucleoporin 210kDa-like
OARD1 O-acyl-ADP-ribose deacylase 1
OCLM oculomedin
OPN5 opsin 5
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR5H6 olfactory receptor, family 5, subfamily H, member 6 (gene/pseudogene)
OR5K2 olfactory receptor, family 5, subfamily K, member 2
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6
PASD1 PAS domain containing 1
PCDHB15 protocadherin beta 15
PCDHB4 protocadherin beta 4
PCP4L1 Purkinje cell protein 4 like 1
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PITPNB phosphatidylinositol transfer protein, beta
PLA2G12B phospholipase A2, group XIIB
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
PLGLB2 plasminogen-like B2
PNISR PNN-interacting serine/arginine-rich protein
POLI polymerase (DNA directed) iota
PPID peptidylprolyl isomerase D
PRICKLE4 prickle homolog 4 (Drosophila)
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PURG purine-rich element binding protein G
PWRN2 Prader-Willi region non-protein coding RNA 2
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RB1CC1 RB1-inducible coiled-coil 1
RBM4B RNA binding motif protein 4B
RBX1 ring-box 1, E3 ubiquitin protein ligase
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
RNF185 ring finger protein 185
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
SACS sacsin molecular chaperone
SAMD5 sterile alpha motif domain containing 5
SCARNA4 small Cajal body-specific RNA 4
SCG3 secretogranin III
SF3A1 splicing factor 3a, subunit 1, 120kDa
SIRT5 sirtuin 5
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC25A27 solute carrier family 25, member 27
SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMIM8 small integral membrane protein 8
SNAP29 synaptosomal-associated protein, 29kDa
SNORA12 small nucleolar RNA, H/ACA box 12
SNORD97 small nucleolar RNA, C/D box 97
SPANXA2 SPANX family, member A2
SPANXN3 SPANX family, member N3
SPESP1 sperm equatorial segment protein 1
SPINK9 serine peptidase inhibitor, Kazal type 9
SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
SRP9 signal recognition particle 9kDa
SRRD SRR1 domain containing
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
STARD4 StAR-related lipid transfer (START) domain containing 4
STEAP2 STEAP family member 2, metalloreductase
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
SYNE1 spectrin repeat containing, nuclear envelope 1
TAL2 T-cell acute lymphocytic leukemia 2
TAS2R19 taste receptor, type 2, member 19
TAS2R30 taste receptor, type 2, member 30
TAS2R4 taste receptor, type 2, member 4
TCEAL2 transcription elongation factor A (SII)-like 2
TCHP trichoplein, keratin filament binding
TENM1 teneurin transmembrane protein 1
TEX15 testis expressed 15
THAP9 THAP domain containing 9
TMEM14A transmembrane protein 14A
TMEM257 transmembrane protein 257
TNRC6B trinucleotide repeat containing 6B
TPSD1 tryptase delta 1
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
TRHR thyrotropin-releasing hormone receptor
TRIM52 tripartite motif containing 52
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TSPAN7 tetraspanin 7
TTC14 tetratricopeptide repeat domain 14
TUG1 taurine up-regulated 1 (non-protein coding)
UBA5 ubiquitin-like modifier activating enzyme 5
UBE2D1 ubiquitin-conjugating enzyme E2D 1
UFM1 ubiquitin-fold modifier 1
UNC93A unc-93 homolog A (C. elegans)
VAMP4 vesicle-associated membrane protein 4
VILL villin-like
VN1R1 vomeronasal 1 receptor 1
VN1R10P vomeronasal 1 receptor 10 pseudogene
WBP5 WW domain binding protein 5
WDR61 WD repeat domain 61
WFDC1 WAP four-disulfide core domain 1
WHAMMP2 WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2
XIST X inactive specific transcript (non-protein coding)
ZBTB18 zinc finger and BTB domain containing 18
ZDBF2 zinc finger, DBF-type containing 2
ZMAT1 zinc finger, matrin-type 1
ZNF117 zinc finger protein 117
ZNF169 zinc finger protein 169
ZNF23 zinc finger protein 23
ZNF280B zinc finger protein 280B
ZNF33B zinc finger protein 33B
ZNF37BP zinc finger protein 37B, pseudogene
ZNF519 zinc finger protein 519
ZNF605 zinc finger protein 605
ZNF621 zinc finger protein 621
ZNF99 zinc finger protein 99

low expression

Symbol Name
AKT1 v-akt murine thymoma viral oncogene homolog 1
ALKBH1 alkB, alkylation repair homolog 1 (E. coli)
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
FAF1 Fas (TNFRSF6) associated factor 1
OXA1L oxidase (cytochrome c) assembly 1-like
RNF31 ring finger protein 31
SNW1 SNW domain containing 1
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TMEM55B transmembrane protein 55B
TOX4 TOX high mobility group box family member 4
ZFYVE1 zinc finger, FYVE domain containing 1
ZNF410 zinc finger protein 410