Brain Lower Grade Glioma_LGG_TCGA-RY-A83X-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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231 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-RY-A83X-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ADCK1 aarF domain containing kinase 1
ADGRV1 adhesion G protein-coupled receptor V1
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AHCTF1 AT hook containing transcription factor 1
ALDH1L2 aldehyde dehydrogenase 1 family, member L2
ALDH8A1 aldehyde dehydrogenase 8 family, member A1
ALMS1P Alstrom syndrome 1 pseudogene
ALOX12B arachidonate 12-lipoxygenase, 12R type
ANKRD6 ankyrin repeat domain 6
ANO8 anoctamin 8
ATG14 autophagy related 14
BEND4 BEN domain containing 4
BRDT bromodomain, testis-specific
BTBD17 BTB (POZ) domain containing 17
C10ORF53 chromosome 10 open reading frame 53
C10ORF62 chromosome 10 open reading frame 62
C17ORF100 chromosome 17 open reading frame 100
C17ORF67 chromosome 17 open reading frame 67
C19ORF45 chromosome 19 open reading frame 45
C1QTNF1 C1q and tumor necrosis factor related protein 1
C20ORF203 chromosome 20 open reading frame 203
C2ORF72 chromosome 2 open reading frame 72
C7ORF34 chromosome 7 open reading frame 34
C8ORF44 chromosome 8 open reading frame 44
CA10 carbonic anhydrase X
CALN1 calneuron 1
CAPN11 calpain 11
CBS cystathionine-beta-synthase
CCNI2 cyclin I family, member 2
CDC14B cell division cycle 14B
CHRM5 cholinergic receptor, muscarinic 5
CLEC16A C-type lectin domain family 16, member A
CLTCL1 clathrin, heavy chain-like 1
CNTD1 cyclin N-terminal domain containing 1
COLGALT2 collagen beta(1-O)galactosyltransferase 2
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
CPOX coproporphyrinogen oxidase
CRISP1 cysteine-rich secretory protein 1
CSDC2 cold shock domain containing C2, RNA binding
CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2
CYP2R1 cytochrome P450, family 2, subfamily R, polypeptide 1
DEFB131 defensin, beta 131
DEFB134 defensin, beta 134
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
ETV4 ets variant 4
EXD3 exonuclease 3'-5' domain containing 3
EYA1 EYA transcriptional coactivator and phosphatase 1
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM131C family with sequence similarity 131, member C
FAM66A family with sequence similarity 66, member A
FAM66E family with sequence similarity 66, member E
FHDC1 FH2 domain containing 1
FLJ13224 uncharacterized LOC79857
FLJ33360 FLJ33360 protein
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
GALNT16 polypeptide N-acetylgalactosaminyltransferase 16
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GIPR gastric inhibitory polypeptide receptor
GPR161 G protein-coupled receptor 161
H2BFXP H2B histone family, member X, pseudogene
HACL1 2-hydroxyacyl-CoA lyase 1
HCG4B HLA complex group 4B (non-protein coding)
HKDC1 hexokinase domain containing 1
IFNK interferon, kappa
ITIH4 inter-alpha-trypsin inhibitor heavy chain family, member 4
KAT2A K(lysine) acetyltransferase 2A
KAZN kazrin, periplakin interacting protein
KCNK12 potassium channel, two pore domain subfamily K, member 12
KLF11 Kruppel-like factor 11
KRT39 keratin 39, type I
KRTAP5-8 keratin associated protein 5-8
LAMA1 laminin, alpha 1
LAMA3 laminin, alpha 3
LCE6A late cornified envelope 6A
LHX3 LIM homeobox 3
LINC00200 long intergenic non-protein coding RNA 200
LINC00652 long intergenic non-protein coding RNA 652
LINC01590 long intergenic non-protein coding RNA 1590
LMF1 lipase maturation factor 1
LOC100133050 glucuronidase, beta pseudogene
LOC285074 anaphase promoting complex subunit 1 pseudogene
LOC286359 uncharacterized LOC286359
LOR loricrin
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LPAR2 lysophosphatidic acid receptor 2
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MCM3AP-AS1 MCM3AP antisense RNA 1
MCUR1 mitochondrial calcium uniporter regulator 1
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MLH3 mutL homolog 3
MLYCD malonyl-CoA decarboxylase
MMD2 monocyte to macrophage differentiation-associated 2
MOGAT1 monoacylglycerol O-acyltransferase 1
MORC2 MORC family CW-type zinc finger 2
MSX2P1 msh homeobox 2 pseudogene 1
NAV1 neuron navigator 1
NBPF10 neuroblastoma breakpoint family, member 10
NCAN neurocan
NEUROG3 neurogenin 3
NHSL1 NHS-like 1
NKX2-8 NK2 homeobox 8
NKX6-3 NK6 homeobox 3
NPW neuropeptide W
OR10A2 olfactory receptor, family 10, subfamily A, member 2
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OSBPL5 oxysterol binding protein-like 5
PCDHGB1 protocadherin gamma subfamily B, 1
PCDHGB6 protocadherin gamma subfamily B, 6
PCDHGC3 protocadherin gamma subfamily C, 3
PDC phosducin
PMS2CL PMS2 C-terminal like pseudogene
POFUT2 protein O-fucosyltransferase 2
POMT2 protein-O-mannosyltransferase 2
PON1 paraoxonase 1
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PPT2 palmitoyl-protein thioesterase 2
PPY2P pancreatic polypeptide 2, pseudogene
PRMT7 protein arginine methyltransferase 7
PRR23A proline rich 23A
PSG2 pregnancy specific beta-1-glycoprotein 2
PSG3 pregnancy specific beta-1-glycoprotein 3
PTGIS prostaglandin I2 (prostacyclin) synthase
RASL10A RAS-like, family 10, member A
RBP3 retinol binding protein 3, interstitial
RGPD8 RANBP2-like and GRIP domain containing 8
RGR retinal G protein coupled receptor
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RNF207 ring finger protein 207
RPL32P3 ribosomal protein L32 pseudogene 3
RUSC1-AS1 RUSC1 antisense RNA 1
SAA3P serum amyloid A3 pseudogene
SCARB1 scavenger receptor class B, member 1
SCARNA17 small Cajal body-specific RNA 17
SCARNA9 small Cajal body-specific RNA 9
SERPINE3 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
SF3A1 splicing factor 3a, subunit 1, 120kDa
SH2B2 SH2B adaptor protein 2
SHPK sedoheptulokinase
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA29 small nucleolar RNA, H/ACA box 29
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA70 small nucleolar RNA, H/ACA box 70
SNORA75 small nucleolar RNA, H/ACA box 75
SNORA9 small nucleolar RNA, H/ACA box 9
SPATA2 spermatogenesis associated 2
SPATA9 spermatogenesis associated 9
SPATC1 spermatogenesis and centriole associated 1
SPRR2G small proline-rich protein 2G
SSTR2 somatostatin receptor 2
SUGT1P1 SUGT1 pseudogene 1
SULF2 sulfatase 2
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SYCE2 synaptonemal complex central element protein 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAL2 T-cell acute lymphocytic leukemia 2
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TARBP1 TAR (HIV-1) RNA binding protein 1
TAS2R13 taste receptor, type 2, member 13
TAS2R43 taste receptor, type 2, member 43
TBC1D10A TBC1 domain family, member 10A
TBC1D28 TBC1 domain family, member 28
TEX33 testis expressed 33
TLE2 transducin-like enhancer of split 2
TMEM14E transmembrane protein 14E
TMEM179 transmembrane protein 179
TMEM38B transmembrane protein 38B
TMEM74B transmembrane protein 74B
TMEM88B transmembrane protein 88B
TMIGD1 transmembrane and immunoglobulin domain containing 1
TNIP2 TNFAIP3 interacting protein 2
TRAPPC12 trafficking protein particle complex 12
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae)
TSSK1B testis-specific serine kinase 1B
TTLL2 tubulin tyrosine ligase-like family member 2
TTLL4 tubulin tyrosine ligase-like family member 4
TTYH2 tweety family member 2
USP44 ubiquitin specific peptidase 44
VSIG10 V-set and immunoglobulin domain containing 10
WDR5B WD repeat domain 5B
ZFP41 ZFP41 zinc finger protein
ZFR2 zinc finger RNA binding protein 2
ZNF488 zinc finger protein 488
ZNF652 zinc finger protein 652
ZNF668 zinc finger protein 668
ZSWIM4 zinc finger, SWIM-type containing 4

low expression

Symbol Name
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
C15ORF40 chromosome 15 open reading frame 40
DTWD1 DTW domain containing 1
EID1 EP300 interacting inhibitor of differentiation 1
EIF3J eukaryotic translation initiation factor 3, subunit J
EMC4 ER membrane protein complex subunit 4
ETFA electron-transfer-flavoprotein, alpha polypeptide
FAM103A1 family with sequence similarity 103, member A1
HDGFRP3 hepatoma-derived growth factor, related protein 3
IPW imprinted in Prader-Willi syndrome (non-protein coding)
LRIF1 ligand dependent nuclear receptor interacting factor 1
MFAP1 microfibrillar-associated protein 1
MORF4L1 mortality factor 4 like 1
NDN necdin, melanoma antigen (MAGE) family member
NDNL2 necdin-like 2
OAZ2 ornithine decarboxylase antizyme 2
PDCD7 programmed cell death 7
PWARSN Prader Willi/Angelman region RNA, SNRPN neighbor
RAB11A RAB11A, member RAS oncogene family
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
SNRPN small nuclear ribonucleoprotein polypeptide N
SNUPN snurportin 1
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae)