Brain Lower Grade Glioma_LGG_TCGA-RY-A843-01A-11R-A36H-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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298 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-RY-A843-01A-11R-A36H-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ACOXL acyl-CoA oxidase-like
ACR acrosin
ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8
ADGRA3 adhesion G protein-coupled receptor A3
ADRB1 adrenoceptor beta 1
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
AGRP agouti related neuropeptide
AGTR2 angiotensin II receptor, type 2
AHCTF1 AT hook containing transcription factor 1
ALG11 ALG11, alpha-1,2-mannosyltransferase
ANAPC10 anaphase promoting complex subunit 10
APOF apolipoprotein F
AQP10 aquaporin 10
ARHGAP5-AS1 ARHGAP5 antisense RNA 1 (head to head)
ARL4D ADP-ribosylation factor-like 4D
ARSH arylsulfatase family, member H
ATOH7 atonal homolog 7 (Drosophila)
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
ATP5F1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
AWAT2 acyl-CoA wax alcohol acyltransferase 2
BAALC brain and acute leukemia, cytoplasmic
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
BCAR3 breast cancer anti-estrogen resistance 3
BDNF brain-derived neurotrophic factor
BSCL2 Berardinelli-Seip congenital lipodystrophy 2 (seipin)
C10ORF113 chromosome 10 open reading frame 113
C10ORF95 chromosome 10 open reading frame 95
C12ORF54 chromosome 12 open reading frame 54
C1ORF21 chromosome 1 open reading frame 21
C1QTNF4 C1q and tumor necrosis factor related protein 4
C20ORF203 chromosome 20 open reading frame 203
C22ORF42 chromosome 22 open reading frame 42
C3ORF70 chromosome 3 open reading frame 70
C8A complement component 8, alpha polypeptide
CA5BP1 carbonic anhydrase VB pseudogene 1
CAGE1 cancer antigen 1
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family)
CAV3 caveolin 3
CBWD6 COBW domain containing 6
CCDC160 coiled-coil domain containing 160
CD1D CD1d molecule
CDADC1 cytidine and dCMP deaminase domain containing 1
CDH20 cadherin 20, type 2
CELP carboxyl ester lipase pseudogene
CLDND2 claudin domain containing 2
CNBD1 cyclic nucleotide binding domain containing 1
CNTN1 contactin 1
COQ9 coenzyme Q9
CRAT carnitine O-acetyltransferase
CT62 cancer/testis antigen 62
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CYCS cytochrome c, somatic
CYP2B7P cytochrome P450, family 2, subfamily B, polypeptide 7, pseudogene
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DCAF4L1 DDB1 and CUL4 associated factor 4-like 1
DDAH1 dimethylarginine dimethylaminohydrolase 1
DKFZP434H168 uncharacterized LOC26077
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding)
DPH3P1 diphthamide biosynthesis 3 pseudogene 1
DRD2 dopamine receptor D2
DSCR4 Down syndrome critical region 4
DSCR9 Down syndrome critical region 9 (non-protein coding)
EAF2 ELL associated factor 2
EGR4 early growth response 4
ERICH6 glutamate-rich 6
ERRFI1 ERBB receptor feedback inhibitor 1
ETNPPL ethanolamine-phosphate phospho-lyase
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM155B family with sequence similarity 155, member B
FAM184A family with sequence similarity 184, member A
FAM83C family with sequence similarity 83, member C
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FBXL22 F-box and leucine-rich repeat protein 22
FBXO42 F-box protein 42
FBXW12 F-box and WD repeat domain containing 12
FERMT2 fermitin family member 2
FGF6 fibroblast growth factor 6
FLJ30679 uncharacterized protein FLJ30679
FMR1-AS1 FMR1 antisense RNA 1
FNBP1L formin binding protein 1-like
FNDC5 fibronectin type III domain containing 5
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
FUT9 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
G6PC glucose-6-phosphatase, catalytic subunit
GATSL3 GATS protein-like 3
GCM2 glial cells missing homolog 2 (Drosophila)
GHR growth hormone receptor
GLTPD2 glycolipid transfer protein domain containing 2
GLUL glutamate-ammonia ligase
GNPDA2 glucosamine-6-phosphate deaminase 2
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
GPR151 G protein-coupled receptor 151
GPR161 G protein-coupled receptor 161
GPR3 G protein-coupled receptor 3
GPR32 G protein-coupled receptor 32
GTSF1L gametocyte specific factor 1-like
GUCY2EP guanylate cyclase 2E, pseudogene
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HECA headcase homolog (Drosophila)
HEXA-AS1 HEXA antisense RNA 1
HIGD1C HIG1 hypoxia inducible domain family, member 1C
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HK2 hexokinase 2
HULC hepatocellular carcinoma up-regulated long non-coding RNA
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IFFO2 intermediate filament family orphan 2
IFNA1 interferon, alpha 1
IGSF22 immunoglobulin superfamily, member 22
IL12B interleukin 12B
IL25 interleukin 25
IL9 interleukin 9
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1
KCTD3 potassium channel tetramerization domain containing 3
KIAA1161 KIAA1161
KIAA1211 KIAA1211
KLHL40 kelch-like family member 40
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LEKR1 leucine, glutamate and lysine rich 1
LIM2 lens intrinsic membrane protein 2, 19kDa
LINC00032 long intergenic non-protein coding RNA 32
LINC00114 long intergenic non-protein coding RNA 114
LINC00167 long intergenic non-protein coding RNA 167
LINC00173 long intergenic non-protein coding RNA 173
LINC00235 long intergenic non-protein coding RNA 235
LINC01465 long intergenic non-protein coding RNA 1465
LOC100130264 uncharacterized LOC100130264
LOC100131496 uncharacterized LOC100131496
LOC100133985 uncharacterized LOC100133985
LOC100134368 uncharacterized LOC100134368
LOC100270746 uncharacterized LOC100270746
LOC285847 uncharacterized LOC285847
LOC340357 uncharacterized LOC340357
LOC388242 coiled-coil domain containing 101 pseudogene
LOC646471 uncharacterized LOC646471
LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 (non-protein coding)
LRRC16A leucine rich repeat containing 16A
LRRC74A leucine rich repeat containing 74A
LVRN laeverin
MAGEB3 melanoma antigen family B3
MAP3K6 mitogen-activated protein kinase kinase kinase 6
MAS1L MAS1 proto-oncogene like, G protein-coupled receptor
MCUR1 mitochondrial calcium uniporter regulator 1
MID1 midline 1
MLNR motilin receptor
MMD2 monocyte to macrophage differentiation-associated 2
MPC1 mitochondrial pyruvate carrier 1
MRAS muscle RAS oncogene homolog
MRPL15 mitochondrial ribosomal protein L15
MRPL35 mitochondrial ribosomal protein L35
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MRVI1 murine retrovirus integration site 1 homolog
MTERF4 mitochondrial transcription termination factor 4
NAGS N-acetylglutamate synthase
NANOG Nanog homeobox
NBEAP1 neurobeachin pseudogene 1
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
NNT nicotinamide nucleotide transhydrogenase
NPAS4 neuronal PAS domain protein 4
NPVF neuropeptide VF precursor
NRG3 neuregulin 3
NRXN1 neurexin 1
NT5C1A 5'-nucleotidase, cytosolic IA
NT5DC3 5'-nucleotidase domain containing 3
NXT2 nuclear transport factor 2-like export factor 2
OAT ornithine aminotransferase
ODF3 outer dense fiber of sperm tails 3
OPN5 opsin 5
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR51B2 olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
OR56A5 olfactory receptor, family 56, subfamily A, member 5
OR6A2 olfactory receptor, family 6, subfamily A, member 2
OR6X1 olfactory receptor, family 6, subfamily X, member 1
OTOP1 otopetrin 1
OTUD6A OTU deubiquitinase 6A
OXCT1 3-oxoacid CoA transferase 1
OXTR oxytocin receptor
PAQR8 progestin and adipoQ receptor family member VIII
PBOV1 prostate and breast cancer overexpressed 1
PCDHA3 protocadherin alpha 3
PCDHA8 protocadherin alpha 8
PCDHB8 protocadherin beta 8
PCDHGA2 protocadherin gamma subfamily A, 2
PCDHGB5 protocadherin gamma subfamily B, 5
PCTP phosphatidylcholine transfer protein
PDHB pyruvate dehydrogenase (lipoamide) beta
PDHX pyruvate dehydrogenase complex, component X
PDZD9 PDZ domain containing 9
PGAM4 phosphoglycerate mutase family member 4
PHF7 PHD finger protein 7
PLCD4 phospholipase C, delta 4
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
POTEB POTE ankyrin domain family, member B
POU5F2 POU domain class 5, transcription factor 2
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PPP1R27 protein phosphatase 1, regulatory subunit 27
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae)
PRDX3 peroxiredoxin 3
PRR25 proline rich 25
PRRG2 proline rich Gla (G-carboxyglutamic acid) 2
PRSS41 protease, serine, 41
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTPRA protein tyrosine phosphatase, receptor type, A
RAB41 RAB41, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RAX2 retina and anterior neural fold homeobox 2
RBM12B-AS1 RBM12B antisense RNA 1
RBM44 RNA binding motif protein 44
RGL1 ral guanine nucleotide dissociation stimulator-like 1
RHOB ras homolog family member B
RHOU ras homolog family member U
RNF115 ring finger protein 115
RNF148 ring finger protein 148
RNF222 ring finger protein 222
RNU11 RNA, U11 small nuclear
RNU4ATAC RNA, U4atac small nuclear (U12-dependent splicing)
RORA RAR-related orphan receptor A
RPL3L ribosomal protein L3-like
SCARNA7 small Cajal body-specific RNA 7
SCGB1C1 secretoglobin, family 1C, member 1
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
SEC14L1 SEC14-like 1 (S. cerevisiae)
SEC14L2 SEC14-like 2 (S. cerevisiae)
SESTD1 SEC14 and spectrin domains 1
SGCZ sarcoglycan, zeta
SH2D4B SH2 domain containing 4B
SH3RF1 SH3 domain containing ring finger 1
SHCBP1L SHC SH2-domain binding protein 1-like
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC25A25 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13
SLC35G6 solute carrier family 35, member G6
SLC36A3 solute carrier family 36, member 3
SLC38A1 solute carrier family 38, member 1
SLC41A1 solute carrier family 41 (magnesium transporter), member 1
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SLITRK3 SLIT and NTRK-like family, member 3
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA36A small nucleolar RNA, H/ACA box 36A
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA77 small nucleolar RNA, H/ACA box 77
SNORA80E small nucleolar RNA, H/ACA box 80E
SNORD97 small nucleolar RNA, C/D box 97
SNX7 sorting nexin 7
SOAT2 sterol O-acyltransferase 2
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPATA19 spermatogenesis associated 19
SSTR2 somatostatin receptor 2
SSUH2 ssu-2 homolog (C. elegans)
ST7-OT4 ST7 overlapping transcript 4
SYCP2L synaptonemal complex protein 2-like
TAS1R2 taste receptor, type 1, member 2
TAS2R30 taste receptor, type 2, member 30
TBX10 T-box 10
TERC telomerase RNA component
TEX15 testis expressed 15
TINCR tissue differentiation-inducing non-protein coding RNA
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TMEM136 transmembrane protein 136
TMEM51-AS1 TMEM51 antisense RNA 1
TRIM31 tripartite motif containing 31
TSC22D3 TSC22 domain family, member 3
TSGA13 testis specific, 13
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UGT2B11 UDP glucuronosyltransferase 2 family, polypeptide B11
ULK4P3 ULK4 pseudogene 3
UMODL1-AS1 UMODL1 antisense RNA 1
URB1-AS1 URB1 antisense RNA 1 (head to head)
VN1R2 vomeronasal 1 receptor 2
VSIG10 V-set and immunoglobulin domain containing 10
WDR91 WD repeat domain 91
WSB2 WD repeat and SOCS box containing 2
ZACN zinc activated ligand-gated ion channel
ZBTB32 zinc finger and BTB domain containing 32
ZFAND5 zinc finger, AN1-type domain 5
ZIM3 zinc finger, imprinted 3
ZNF160 zinc finger protein 160
ZNF189 zinc finger protein 189
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF415 zinc finger protein 415
ZNF436-AS1 ZNF436 antisense RNA 1
ZNF703 zinc finger protein 703

low expression

Symbol Name
C11ORF71 chromosome 11 open reading frame 71
RBM7 RNA binding motif protein 7