Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RN-01A-11R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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281 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RN-01A-11R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACSL6 acyl-CoA synthetase long-chain family member 6
ACSS1 acyl-CoA synthetase short-chain family member 1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADAT1 adenosine deaminase, tRNA-specific 1
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide
ALG11 ALG11, alpha-1,2-mannosyltransferase
ALOX12 arachidonate 12-lipoxygenase
AMER2 APC membrane recruitment protein 2
ANGPTL2 angiopoietin-like 2
ANKRD16 ankyrin repeat domain 16
ANO8 anoctamin 8
ANP32A-IT1 ANP32A intronic transcript 1
ARL17B ADP-ribosylation factor-like 17B
ARPIN actin-related protein 2/3 complex inhibitor
ASB14 ankyrin repeat and SOCS box containing 14
ATM ATM serine/threonine kinase
BRD7 bromodomain containing 7
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
BSX brain-specific homeobox
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
BTBD18 BTB (POZ) domain containing 18
C10ORF95 chromosome 10 open reading frame 95
C11ORF80 chromosome 11 open reading frame 80
C15ORF39 chromosome 15 open reading frame 39
C16ORF78 chromosome 16 open reading frame 78
C17ORF78 chromosome 17 open reading frame 78
C19ORF71 chromosome 19 open reading frame 71
C20ORF144 chromosome 20 open reading frame 144
C21ORF62-AS1 C21orf62 antisense RNA 1
C2ORF16 chromosome 2 open reading frame 16
C4ORF29 chromosome 4 open reading frame 29
C9ORF173 chromosome 9 open reading frame 173
CAGE1 cancer antigen 1
CALN1 calneuron 1
CASP12 caspase 12 (gene/pseudogene)
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CBWD5 COBW domain containing 5
CCDC80 coiled-coil domain containing 80
CCNB3 cyclin B3
CDH26 cadherin 26
CDKL3 cyclin-dependent kinase-like 3
CECR2 cat eye syndrome chromosome region, candidate 2
CEP295 centrosomal protein 295kDa
CERCAM cerebral endothelial cell adhesion molecule
CHD9 chromodomain helicase DNA binding protein 9
CHRM4 cholinergic receptor, muscarinic 4
CNTD1 cyclin N-terminal domain containing 1
COX18 COX18 cytochrome c oxidase assembly factor
CRIPAK cysteine-rich PAK1 inhibitor
CRLS1 cardiolipin synthase 1
CRY2 cryptochrome circadian clock 2
CRYBG3 beta-gamma crystallin domain containing 3
CST9 cystatin 9 (testatin)
CT62 cancer/testis antigen 62
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
DCLK2 doublecortin-like kinase 2
DCST1 DC-STAMP domain containing 1
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DNAH1 dynein, axonemal, heavy chain 1
DNAH14 dynein, axonemal, heavy chain 14
DUSP13 dual specificity phosphatase 13
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
ESX1 ESX homeobox 1
FAM181B family with sequence similarity 181, member B
FANCD2OS FANCD2 opposite strand
FBXL21 F-box and leucine-rich repeat protein 21 (gene/pseudogene)
FCHSD2 FCH and double SH3 domains 2
FLJ42393 uncharacterized LOC401105
FLVCR2 feline leukemia virus subgroup C cellular receptor family, member 2
FNIP1 folliculin interacting protein 1
FXYD2 FXYD domain containing ion transport regulator 2
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18
GANC glucosidase, alpha; neutral C
GATSL2 GATS protein-like 2
GLYCTK glycerate kinase
GMCL1 germ cell-less, spermatogenesis associated 1
GOLGA6B golgin A6 family, member B
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPRC5C G protein-coupled receptor, class C, group 5, member C
GRID2 glutamate receptor, ionotropic, delta 2
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GUSBP4 glucuronidase, beta pseudogene 4
H2BFM H2B histone family, member M
HAPLN1 hyaluronan and proteoglycan link protein 1
HDAC4 histone deacetylase 4
HOXA2 homeobox A2
HOXA3 homeobox A3
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1
IGSF9B immunoglobulin superfamily, member 9B
IL9 interleukin 9
INCA1 inhibitor of CDK, cyclin A1 interacting protein 1
INHBC inhibin, beta C
INTS4P1 integrator complex subunit 4 pseudogene 1
JPH2 junctophilin 2
KCNIP2 Kv channel interacting protein 2
KCNJ14 potassium channel, inwardly rectifying subfamily J, member 14
KCNK4 potassium channel, two pore domain subfamily K, member 4
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KDM3B lysine (K)-specific demethylase 3B
KIAA1919 KIAA1919
KIF21B kinesin family member 21B
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KRBA2 KRAB-A domain containing 2
KRTAP3-1 keratin associated protein 3-1
LECT2 leukocyte cell-derived chemotaxin 2
LGALS4 lectin, galactoside-binding, soluble, 4
LHFPL1 lipoma HMGIC fusion partner-like 1
LIN28A lin-28 homolog A (C. elegans)
LINC00244 long intergenic non-protein coding RNA 244
LINC00593 long intergenic non-protein coding RNA 593
LOC100134368 uncharacterized LOC100134368
LOC100268168 uncharacterized LOC100268168
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC283332 uncharacterized LOC283332
LOC389332 uncharacterized LOC389332
LOC391322 D-dopachrome tautomerase-like
LOC613037 nuclear pore complex interacting protein pseudogene
LOC650293 seven transmembrane helix receptor
LOC728613 programmed cell death 6 pseudogene
LONRF1 LON peptidase N-terminal domain and ring finger 1
LOR loricrin
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRPPRC leucine-rich pentatricopeptide repeat containing
LRRN1 leucine rich repeat neuronal 1
MAGEH1 melanoma antigen family H1
MCTS1 malignant T cell amplified sequence 1
MEP1B meprin A, beta
MRGPRX4 MAS-related GPR, member X4
MST1 macrophage stimulating 1
MUC4 mucin 4, cell surface associated
MYO3B myosin IIIB
MYOD1 myogenic differentiation 1
NBPF15 neuroblastoma breakpoint family, member 15
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NKD1 naked cuticle homolog 1 (Drosophila)
NKX1-2 NK1 homeobox 2
NKX6-3 NK6 homeobox 3
NLRX1 NLR family member X1
NOP14-AS1 NOP14 antisense RNA 1
NR6A1 nuclear receptor subfamily 6, group A, member 1
NT5C1A 5'-nucleotidase, cytosolic IA
OCLM oculomedin
OLIG1 oligodendrocyte transcription factor 1
OPHN1 oligophrenin 1
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
OTUD6A OTU deubiquitinase 6A
OVCH2 ovochymase 2 (gene/pseudogene)
PCDHA6 protocadherin alpha 6
PCDHGA2 protocadherin gamma subfamily A, 2
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGB5 protocadherin gamma subfamily B, 5
PCNXL3 pecanex-like 3 (Drosophila)
PDZD8 PDZ domain containing 8
PDZK1P1 PDZ domain containing 1 pseudogene 1
PEAK1 pseudopodium-enriched atypical kinase 1
PGBD4 piggyBac transposable element derived 4
PHACTR1 phosphatase and actin regulator 1
PHF7 PHD finger protein 7
PIGS phosphatidylinositol glycan anchor biosynthesis, class S
PITX3 paired-like homeodomain 3
PMS2CL PMS2 C-terminal like pseudogene
POTEC POTE ankyrin domain family, member C
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PRAMEF6 PRAME family member 6
PRELP proline/arginine-rich end leucine-rich repeat protein
PRMT3 protein arginine methyltransferase 3
PRO0628 uncharacterized LOC29053
QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
RAB2A RAB2A, member RAS oncogene family
RAB40A RAB40A, member RAS oncogene family
RANBP6 RAN binding protein 6
RBP2 retinol binding protein 2, cellular
REN renin
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit
RGL4 ral guanine nucleotide dissociation stimulator-like 4
RMND5B required for meiotic nuclear division 5 homolog B (S. cerevisiae)
RNASE8 ribonuclease, RNase A family, 8
RNF103 ring finger protein 103
RNF151 ring finger protein 151
RNF222 ring finger protein 222
RP1L1 retinitis pigmentosa 1-like 1
RPS26P11 ribosomal protein S26 pseudogene 11
RRAGD Ras-related GTP binding D
SCGB1C1 secretoglobin, family 1C, member 1
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SDHAP3 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3
SELV selenoprotein V
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
SIDT2 SID1 transmembrane family, member 2
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC16A9 solute carrier family 16, member 9
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC38A1 solute carrier family 38, member 1
SLC39A5 solute carrier family 39 (zinc transporter), member 5
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNORA11E small nucleolar RNA, H/ACA box 11E
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA36B small nucleolar RNA, H/ACA box 36B
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA65 small nucleolar RNA, H/ACA box 65
SNORD115-13 small nucleolar RNA, C/D box 115-13
SNORD115-7 small nucleolar RNA, C/D box 115-7
SNX12 sorting nexin 12
SNX19 sorting nexin 19
SP7 Sp7 transcription factor
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPDYE6 speedy/RINGO cell cycle regulator family member E6
SPDYE7P speedy/RINGO cell cycle regulator family member E7, pseudogene
ST6GAL2 ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
STH saitohin
TAAR2 trace amine associated receptor 2
TAS2R3 taste receptor, type 2, member 3
TAS2R46 taste receptor, type 2, member 46
TBC1D32 TBC1 domain family, member 32
TBCEL tubulin folding cofactor E-like
TBX6 T-box 6
TEDDM1 transmembrane epididymal protein 1
TET1 tet methylcytosine dioxygenase 1
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TMEM136 transmembrane protein 136
TMEM8B transmembrane protein 8B
TOX3 TOX high mobility group box family member 3
TP53I3 tumor protein p53 inducible protein 3
TRIM64 tripartite motif containing 64
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TSPAN32 tetraspanin 32
TSPO2 translocator protein 2
TSSK6 testis-specific serine kinase 6
TTC14 tetratricopeptide repeat domain 14
TTC36 tetratricopeptide repeat domain 36
TTC38 tetratricopeptide repeat domain 38
TTLL2 tubulin tyrosine ligase-like family member 2
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UCMA upper zone of growth plate and cartilage matrix associated
USP49 ubiquitin specific peptidase 49
UVSSA UV-stimulated scaffold protein A
WDR86 WD repeat domain 86
XDH xanthine dehydrogenase
XKR6 XK, Kell blood group complex subunit-related family, member 6
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
ZBED5 zinc finger, BED-type containing 5
ZBTB25 zinc finger and BTB domain containing 25
ZBTB3 zinc finger and BTB domain containing 3
ZBTB47 zinc finger and BTB domain containing 47
ZCCHC13 zinc finger, CCHC domain containing 13
ZCWPW2 zinc finger, CW type with PWWP domain 2
ZDHHC11 zinc finger, DHHC-type containing 11
ZFP62 ZFP62 zinc finger protein
ZNF157 zinc finger protein 157
ZNF236 zinc finger protein 236
ZNF333 zinc finger protein 333
ZNF334 zinc finger protein 334
ZNF454 zinc finger protein 454
ZNF555 zinc finger protein 555
ZNF592 zinc finger protein 592
ZNF70 zinc finger protein 70
ZNF703 zinc finger protein 703
ZNF727 zinc finger protein 727
ZNF843 zinc finger protein 843
ZNF876P zinc finger protein 876, pseudogene
ZNF99 zinc finger protein 99
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1

low expression

Symbol Name
ASTE1 asteroid homolog 1 (Drosophila)
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NOMO1 NODAL modulator 1
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5