Brimonidine_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Brimonidine perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Brimonidine_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.0628398
ELL2 elongation factor, RNA polymerase II, 2 0.0569183
FAM13A family with sequence similarity 13, member A 0.0505029
TENT5A terminal nucleotidyltransferase 5A 0.0502782
NDRG1 N-myc downstream regulated 1 0.0480937
NRXN3 neurexin 3 0.0476136
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0439986
NAMPT nicotinamide phosphoribosyltransferase 0.0417141
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0406433
AVL9 AVL9 homolog (S. cerevisiase) 0.0405603
ZCCHC7 zinc finger, CCHC domain containing 7 0.0401037
ESYT2 extended synaptotagmin-like protein 2 0.0387842
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.037927
PIAS1 protein inhibitor of activated STAT, 1 0.0369475
MARCHF6 membrane associated ring-CH-type finger 6 0.0366107
UBA6 ubiquitin-like modifier activating enzyme 6 0.0353799
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0316846
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0305926
WSB1 WD repeat and SOCS box containing 1 0.03011
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0296609
RAB8B RAB8B, member RAS oncogene family 0.029084
SGCE sarcoglycan, epsilon 0.0283402
INSIG2 insulin induced gene 2 0.027986
COG6 component of oligomeric golgi complex 6 0.027853
VMP1 vacuole membrane protein 1 0.0274759
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0273069
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0272059
BHLHE40 basic helix-loop-helix family, member e40 0.0270977
PTN pleiotrophin 0.02706
RNF145 ring finger protein 145 0.0269054
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0266913
UGCG UDP-glucose ceramide glucosyltransferase 0.02658
GPBP1 GC-rich promoter binding protein 1 0.0265031
C1D C1D nuclear receptor corepressor 0.0258557
BACE2 beta-site APP-cleaving enzyme 2 0.0257807
TMEM165 transmembrane protein 165 0.0257799
RNF24 ring finger protein 24 0.0253037
ARRDC3 arrestin domain containing 3 0.0252287
AKAP9 A kinase (PRKA) anchor protein 9 0.0243912
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0243247
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0242365
USP3 ubiquitin specific peptidase 3 0.0241504
ITCH itchy E3 ubiquitin protein ligase 0.024149
WDR26 WD repeat domain 26 0.0241094
WASHC4 WASH complex subunit 4 0.0240906
BET1 Bet1 golgi vesicular membrane trafficking protein 0.0238839
CYLD cylindromatosis (turban tumor syndrome) 0.0238613
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.023716
COG5 component of oligomeric golgi complex 5 0.0237043
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0236651
TTC3 tetratricopeptide repeat domain 3 0.0235706
MT1X metallothionein 1X 0.0233582
CD109 CD109 molecule 0.0232591
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0231082
YTHDC1 YTH domain containing 1 0.0230382
TBC1D23 TBC1 domain family, member 23 0.0228361
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0226759
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0226088
ELP2 elongator acetyltransferase complex subunit 2 0.0225102
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0224636
OPTN optineurin 0.022355
MBD5 methyl-CpG binding domain protein 5 0.0222301
ANKRD36 ankyrin repeat domain 36 0.0221685
RNF169 ring finger protein 169 0.0221577
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0221572
UBN2 ubinuclein 2 0.0217503
ANKHD1 ankyrin repeat and KH domain containing 1 0.0217297
FMNL2 formin-like 2 0.0216004
GOLGA4 golgin A4 0.0215939
ARHGAP35 Rho GTPase activating protein 35 0.0214937
FEM1C fem-1 homolog c (C. elegans) 0.0213465
BLTP1 bridge-like lipid transfer protein family member 1 0.0212713
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0212538
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0211969
DENND5A DENN/MADD domain containing 5A 0.0209983
LEPROT leptin receptor overlapping transcript 0.0208544
TMF1 TATA element modulatory factor 1 0.0208324
FAM13B family with sequence similarity 13, member B 0.0207135
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0207009
ZNF148 zinc finger protein 148 0.0204745
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0204629
ZNF638 zinc finger protein 638 0.020305
NCOR2 nuclear receptor corepressor 2 0.0202966
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0201406
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0200101
SHB Src homology 2 domain containing adaptor protein B 0.0199759
SMYD3 SET and MYND domain containing 3 0.0198828
CLEC1B C-type lectin domain family 1, member B 0.0197817
CXCL3 chemokine (C-X-C motif) ligand 3 0.0197724
CPAP centrosome assembly and centriole elongation protein 0.0197653
SPRED2 sprouty-related, EVH1 domain containing 2 0.0196855
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0194335
HELZ helicase with zinc finger 0.0191965
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0191904
BIRC3 baculoviral IAP repeat containing 3 0.0191585
NPEPPS aminopeptidase puromycin sensitive 0.0190888
TGFB1 transforming growth factor, beta 1 0.0189656
STK17B serine/threonine kinase 17b 0.0189315
MORF4L2 mortality factor 4 like 2 0.018763
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0187098

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.17508
COL6A3 collagen, type VI, alpha 3 -0.168533
TGFBI transforming growth factor, beta-induced, 68kDa -0.148799
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.141148
FN1 fibronectin 1 -0.138198
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.124408
TMSB10 thymosin beta 10 -0.0954374
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0933781
IGFBP3 insulin-like growth factor binding protein 3 -0.0855442
ANXA2 annexin A2 -0.0763934
B2M beta-2-microglobulin -0.0719972
ACTG1 actin gamma 1 -0.0719434
MAP1B microtubule-associated protein 1B -0.0697384
FTL ferritin, light polypeptide -0.0686873
PTMA prothymosin, alpha -0.0681396
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.067701
VCL vinculin -0.0673622
POTEF POTE ankyrin domain family, member F -0.0640771
CDH13 cadherin 13 -0.0617821
CALU calumenin -0.0602477
PRSS23 protease, serine, 23 -0.0600147
CALD1 caldesmon 1 -0.0593206
ENO1 enolase 1, (alpha) -0.0589392
TPM4 tropomyosin 4 -0.0582857
COL6A1 collagen, type VI, alpha 1 -0.0565628
TRIO trio Rho guanine nucleotide exchange factor -0.0535249
COL6A2 collagen, type VI, alpha 2 -0.0513465
HLA-B major histocompatibility complex, class I, B -0.0512039
COL1A1 collagen, type I, alpha 1 -0.0478277
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0459853
STC1 stanniocalcin 1 -0.0456475
RAI14 retinoic acid induced 14 -0.0449905
LOX lysyl oxidase -0.0448275
PSD3 pleckstrin and Sec7 domain containing 3 -0.044237
EXT1 exostosin glycosyltransferase 1 -0.0410265
RPS8 ribosomal protein S8 -0.0409041
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0399794
COL1A2 collagen, type I, alpha 2 -0.039319
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0393112
COL5A1 collagen, type V, alpha 1 -0.0383257
CD44 CD44 molecule (Indian blood group) -0.036603
AKAP12 A kinase (PRKA) anchor protein 12 -0.036107
RPL35A ribosomal protein L35a -0.0347057
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0344568
TNNC1 troponin C type 1 (slow) -0.0342935
KTN1 kinectin 1 (kinesin receptor) -0.0342301
PHACTR4 phosphatase and actin regulator 4 -0.0337649
MAP4 microtubule-associated protein 4 -0.0336862
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0335874
TPT1 tumor protein, translationally-controlled 1 -0.033326
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0328972
PTPRK protein tyrosine phosphatase, receptor type, K -0.0324846
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.032239
RPL11 ribosomal protein L11 -0.031697
COL7A1 collagen, type VII, alpha 1 -0.031613
TMSB4X thymosin beta 4, X-linked -0.0314954
CLTC clathrin, heavy chain (Hc) -0.0310606
LOXL2 lysyl oxidase-like 2 -0.0306267
F3 coagulation factor III (thromboplastin, tissue factor) -0.0305887
KYNU kynureninase -0.030281
HIPK2 homeodomain interacting protein kinase 2 -0.0302493
FNDC3B fibronectin type III domain containing 3B -0.0295348
MYO10 myosin X -0.029249
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase -0.0286567
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0285531
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0283612
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0283045
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0281022
RPL15 ribosomal protein L15 -0.0277814
RPLP1 ribosomal protein, large, P1 -0.0275388
S100A10 S100 calcium binding protein A10 -0.0274344
SRPK2 SRSF protein kinase 2 -0.0268023
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0267452
CTSB cathepsin B -0.0263894
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0263584
KMT2C lysine (K)-specific methyltransferase 2C -0.0263116
USP34 ubiquitin specific peptidase 34 -0.0261965
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.026169
CDK6 cyclin-dependent kinase 6 -0.0261097
SLC38A2 solute carrier family 38, member 2 -0.0260046
CDK13 cyclin-dependent kinase 13 -0.0258277
NAV1 neuron navigator 1 -0.025731
RASAL2 RAS protein activator like 2 -0.025595
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.0251956
THBS1 thrombospondin 1 -0.0247775
UBC ubiquitin C -0.0246465
HLA-C major histocompatibility complex, class I, C -0.0246396
RPL34 ribosomal protein L34 -0.0245141
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0242532
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0239591
TNS3 tensin 3 -0.0239287
MYOF myoferlin -0.0238298
HMGB1 high mobility group box 1 -0.023581
LAMB1 laminin, beta 1 -0.0235555
CKAP4 cytoskeleton-associated protein 4 -0.0235401
FAT1 FAT atypical cadherin 1 -0.0234882
KAZN kazrin, periplakin interacting protein -0.0232382
PDIA6 protein disulfide isomerase family A, member 6 -0.0231259
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) -0.0229704
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0229285