Brivudine_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Brivudine perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Brivudine_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.176983
EGFR epidermal growth factor receptor 0.17491
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0909277
CANX calnexin 0.05242
PTMA prothymosin, alpha 0.0503162
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0492667
INTS6 integrator complex subunit 6 0.0463846
LMO7 LIM domain 7 0.0459794
ASPH aspartate beta-hydroxylase 0.0450565
ENO1 enolase 1, (alpha) 0.0441863
FAM13A family with sequence similarity 13, member A 0.04137
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0397774
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0396705
DSCAM Down syndrome cell adhesion molecule 0.037637
TBC1D22A TBC1 domain family, member 22A 0.0370415
UBC ubiquitin C 0.0369619
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0345584
HDLBP high density lipoprotein binding protein 0.0330531
HSPA8 heat shock 70kDa protein 8 0.0321345
TOP1 topoisomerase (DNA) I 0.031854
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0316017
SOD2 superoxide dismutase 2, mitochondrial 0.0312089
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0309232
PDIA6 protein disulfide isomerase family A, member 6 0.0306826
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0306288
AHNAK AHNAK nucleoprotein 0.0303979
CSNK1A1 casein kinase 1, alpha 1 0.0302598
OGA O-GlcNAcase 0.030149
H1-0 H1.0 linker histone 0.029956
MACF1 microtubule-actin crosslinking factor 1 0.0299504
SEC31A SEC31 homolog A (S. cerevisiae) 0.0295377
HYOU1 hypoxia up-regulated 1 0.0293429
RPS3 ribosomal protein S3 0.029065
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0285553
SPAG9 sperm associated antigen 9 0.0279741
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0276692
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0271782
HOMER1 homer scaffolding protein 1 0.0270587
ARRDC3 arrestin domain containing 3 0.0265191
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0265098
PAPOLA poly(A) polymerase alpha 0.0264666
GOLGB1 golgin B1 0.026454
APLP2 amyloid beta (A4) precursor-like protein 2 0.0263902
TMCO3 transmembrane and coiled-coil domains 3 0.0263817
MYH9 myosin, heavy chain 9, non-muscle 0.0263431
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0261226
MYOF myoferlin 0.0256926
ENSA endosulfine alpha 0.0254183
SMAD3 SMAD family member 3 0.0254048
TTC3 tetratricopeptide repeat domain 3 0.0253437
CALR calreticulin 0.0252007
PYGL phosphorylase, glycogen, liver 0.0250942
SLTM SAFB-like, transcription modulator 0.0250221
ANO6 anoctamin 6 0.0247219
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0246005
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0242104
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0235023
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0233505
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0230368
ZC3H11A zinc finger CCCH-type containing 11A 0.0228548
HELZ helicase with zinc finger 0.0227935
DSPP dentin sialophosphoprotein 0.0224008
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0223614
UVRAG UV radiation resistance associated 0.0221636
USP9X ubiquitin specific peptidase 9, X-linked 0.0221606
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0220954
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0217225
HBP1 HMG-box transcription factor 1 0.0216033
HOOK2 hook microtubule-tethering protein 2 0.0213855
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0213792
MORF4L2 mortality factor 4 like 2 0.0209944
RPL4 ribosomal protein L4 0.020465
TPT1 tumor protein, translationally-controlled 1 0.0204649
RAB1A RAB1A, member RAS oncogene family 0.0204022
CAMTA1 calmodulin binding transcription activator 1 0.0202854
DTNA dystrobrevin, alpha 0.0202512
AFF1 AF4/FMR2 family, member 1 0.0199836
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0198815
KDM3A lysine (K)-specific demethylase 3A 0.0198244
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0197678
RBM39 RNA binding motif protein 39 0.0197354
SP100 SP100 nuclear antigen 0.0195174
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0194628
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0193496
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0191832
CEMIP cell migration inducing protein, hyaluronan binding 0.0190854
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0190318
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0189656
NAP1L1 nucleosome assembly protein 1-like 1 0.0189566
ANKRD10 ankyrin repeat domain 10 0.0187755
NPTN neuroplastin 0.0186013
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0182238
SEC24A SEC24 family member A 0.0181236
ABLIM1 actin binding LIM protein 1 0.017795
AGO2 argonaute RISC catalytic component 2 0.0177913
BACE2 beta-site APP-cleaving enzyme 2 0.0177243
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0176488
MXI1 MAX interactor 1, dimerization protein 0.0175614
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0172475
ATXN1 ataxin 1 0.0171711

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.159123
TXNRD1 thioredoxin reductase 1 -0.131317
TMSB10 thymosin beta 10 -0.100573
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0945601
MT2A metallothionein 2A -0.0906537
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.088045
OSMR oncostatin M receptor -0.0688988
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0605765
LRP1B low density lipoprotein receptor-related protein 1B -0.0581395
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0576539
CAV1 caveolin 1, caveolae protein, 22kDa -0.0562062
FTH1 ferritin, heavy polypeptide 1 -0.0497577
AKR1C1 aldo-keto reductase family 1, member C1 -0.048644
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0474678
CST3 cystatin C -0.046031
LAMA4 laminin, alpha 4 -0.0447395
FTL ferritin, light polypeptide -0.0399274
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) -0.0357867
EGR1 early growth response 1 -0.0357496
NDRG1 N-myc downstream regulated 1 -0.0317615
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.031274
SLC38A1 solute carrier family 38, member 1 -0.0312167
AREG amphiregulin -0.0304033
LAMC2 laminin, gamma 2 -0.0280782
THSD4 thrombospondin, type I, domain containing 4 -0.0273064
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0257298
RAB27B RAB27B, member RAS oncogene family -0.0253003
ACTG1 actin gamma 1 -0.0251193
CAV2 caveolin 2 -0.0250315
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0248305
SCEL sciellin -0.0248191
CCNL1 cyclin L1 -0.0245481
IFI6 interferon, alpha-inducible protein 6 -0.024324
RPL35A ribosomal protein L35a -0.0238096
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0237045
S100A11 S100 calcium binding protein A11 -0.0229554
KRT7 keratin 7, type II -0.0220969
IGFBP3 insulin-like growth factor binding protein 3 -0.0207474
ZBTB20 zinc finger and BTB domain containing 20 -0.0207404
PTPRM protein tyrosine phosphatase, receptor type, M -0.0204834
RTN4 reticulon 4 -0.0201782
MGST1 microsomal glutathione S-transferase 1 -0.0199383
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0194445
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0193551
TJP1 tight junction protein 1 -0.0192882
LOC112694756 uncharaterized LOC112694756 -0.0192643
S100A9 S100 calcium binding protein A9 -0.0188264
EFNA5 ephrin-A5 -0.0187945
BLZF1 basic leucine zipper nuclear factor 1 -0.0186177
PRDX1 peroxiredoxin 1 -0.0181155
POTEF POTE ankyrin domain family, member F -0.0177572
PATJ PATJ crumbs cell polarity complex component -0.0169161
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0169043
PDLIM5 PDZ and LIM domain 5 -0.0166429
SYAP1 synapse associated protein 1 -0.0164552
VCL vinculin -0.0157532
NPC1 Niemann-Pick disease, type C1 -0.015643
MT1X metallothionein 1X -0.0155901
CCND1 cyclin D1 -0.0154371
PFN1 profilin 1 -0.0152316
GCLC glutamate-cysteine ligase, catalytic subunit -0.0149645
HMGA1 high mobility group AT-hook 1 -0.0146073
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0145852
KRT18 keratin 18, type I -0.0144564
TSC22D2 TSC22 domain family, member 2 -0.0144225
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0144191
MYO1D myosin ID -0.0143963
TMOD3 tropomodulin 3 (ubiquitous) -0.0143947
RNF149 ring finger protein 149 -0.0143231
B2M beta-2-microglobulin -0.0142832
RPL11 ribosomal protein L11 -0.014249
RPS21 ribosomal protein S21 -0.0136975
KRT19 keratin 19, type I -0.0135465
CHML choroideremia-like (Rab escort protein 2) -0.0132997
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0129875
NABP1 nucleic acid binding protein 1 -0.012964
MKI67 marker of proliferation Ki-67 -0.0128858
TPM4 tropomyosin 4 -0.0127715
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.01274
IFI27 interferon, alpha-inducible protein 27 -0.0127273
LPP LIM domain containing preferred translocation partner in lipoma -0.0124806
CCL20 chemokine (C-C motif) ligand 20 -0.0123499
ZMYND8 zinc finger, MYND-type containing 8 -0.0122911
XDH xanthine dehydrogenase -0.0122909
GCLM glutamate-cysteine ligase, modifier subunit -0.0122256
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0121952
MAGEA4 melanoma antigen family A4 -0.0121838
STC1 stanniocalcin 1 -0.0120479
KPNB1 karyopherin (importin) beta 1 -0.0119803
KIFC3 kinesin family member C3 -0.0119735
GSTP1 glutathione S-transferase pi 1 -0.0119492
ADGRF1 adhesion G protein-coupled receptor F1 -0.0118962
PKM pyruvate kinase, muscle -0.0118822
SPTSSA serine palmitoyltransferase, small subunit A -0.0117459
FOSL1 FOS-like antigen 1 -0.0115429
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0115297
NTN4 netrin 4 -0.0113972
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0113725
RPS19 ribosomal protein S19 -0.0112173
KRT8 keratin 8, type II -0.0111692