Brivudine_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Brivudine perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Brivudine_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.210862
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.174305
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.124599
AKAP12 A kinase (PRKA) anchor protein 12 0.101471
TPM3 tropomyosin 3 0.0778936
ENO1 enolase 1, (alpha) 0.0745299
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0713663
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0712179
RPS3 ribosomal protein S3 0.0706842
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.068569
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0624339
DST dystonin 0.0615396
ACTG1 actin gamma 1 0.0614951
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0614714
UBC ubiquitin C 0.0608699
HSPA8 heat shock 70kDa protein 8 0.0576133
RPL3 ribosomal protein L3 0.0562994
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0557955
MYH9 myosin, heavy chain 9, non-muscle 0.0551305
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0549919
GOLGB1 golgin B1 0.0545717
ZSWIM6 zinc finger, SWIM-type containing 6 0.0509767
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0504854
RPL4 ribosomal protein L4 0.0496419
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0493017
VCL vinculin 0.0490075
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0472163
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0470961
EEF2 eukaryotic translation elongation factor 2 0.0457946
CALR calreticulin 0.04564
INTS6 integrator complex subunit 6 0.0456295
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0420003
BRD2 bromodomain containing 2 0.0418391
CTTN cortactin 0.0411746
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0408037
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0407735
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.040633
RPS4X ribosomal protein S4, X-linked 0.0401169
SFTPA2 surfactant protein A2 0.0395196
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0393168
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0390941
DSPP dentin sialophosphoprotein 0.0386706
APLP2 amyloid beta (A4) precursor-like protein 2 0.0379932
LDHA lactate dehydrogenase A 0.0375344
EEF1G eukaryotic translation elongation factor 1 gamma 0.0372179
AHNAK AHNAK nucleoprotein 0.0362427
RPL37 ribosomal protein L37 0.0361323
RPS8 ribosomal protein S8 0.0349277
SYT1 synaptotagmin I 0.0346774
ATF6 activating transcription factor 6 0.0346148
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0343941
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0343212
NAP1L1 nucleosome assembly protein 1-like 1 0.0339577
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0337719
CANX calnexin 0.0337453
KTN1 kinectin 1 (kinesin receptor) 0.0334385
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0329066
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0324245
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0320385
WNT2B wingless-type MMTV integration site family, member 2B 0.0318307
MACF1 microtubule-actin crosslinking factor 1 0.0317538
RPS12 ribosomal protein S12 0.0312984
GMDS GDP-mannose 4,6-dehydratase 0.0310915
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0309151
ALCAM activated leukocyte cell adhesion molecule 0.0296393
AEBP2 AE binding protein 2 0.0295222
CSDE1 cold shock domain containing E1, RNA-binding 0.0293822
SND1 staphylococcal nuclease and tudor domain containing 1 0.0290346
SET SET nuclear proto-oncogene 0.0290023
CALD1 caldesmon 1 0.0289874
PCLO piccolo presynaptic cytomatrix protein 0.02893
PDIA4 protein disulfide isomerase family A, member 4 0.0289187
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0288981
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0286623
RPS27A ribosomal protein S27a 0.0281357
EXT1 exostosin glycosyltransferase 1 0.0280995
POTEF POTE ankyrin domain family, member F 0.0280597
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.027986
H1-0 H1.0 linker histone 0.0278498
FKBP4 FK506 binding protein 4, 59kDa 0.0276758
SPAG9 sperm associated antigen 9 0.0275385
PDLIM5 PDZ and LIM domain 5 0.0274137
PDIA6 protein disulfide isomerase family A, member 6 0.027142
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.027125
GDI2 GDP dissociation inhibitor 2 0.0269871
TPI1 triosephosphate isomerase 1 0.0265974
MCL1 myeloid cell leukemia 1 0.0263474
WWOX WW domain containing oxidoreductase 0.0263159
B2M beta-2-microglobulin 0.0262063
RPS18 ribosomal protein S18 0.0261359
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 0.0260889
SFPQ splicing factor proline/glutamine-rich 0.0260876
CALU calumenin 0.0260499
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0258036
VCP valosin containing protein 0.0254717
RRM2 ribonucleotide reductase M2 0.0253755
DOCK5 dedicator of cytokinesis 5 0.0252089
RPS17 ribosomal protein S17 0.0249433
CLTC clathrin, heavy chain (Hc) 0.0246817
RPL23 ribosomal protein L23 0.0244968

decreased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0665094
BBX bobby sox homolog (Drosophila) -0.0649238
WSB1 WD repeat and SOCS box containing 1 -0.0593823
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0583639
PFN1 profilin 1 -0.057883
PHIP pleckstrin homology domain interacting protein -0.0575512
RSF1 remodeling and spacing factor 1 -0.0562378
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0538984
KDM2A lysine (K)-specific demethylase 2A -0.0530981
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0507051
CCNL1 cyclin L1 -0.0485915
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0476525
ZMYND8 zinc finger, MYND-type containing 8 -0.0464522
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0442641
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0438605
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0414858
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0409442
PHF21A PHD finger protein 21A -0.0406249
TMEM165 transmembrane protein 165 -0.0395806
SENP6 SUMO1/sentrin specific peptidase 6 -0.0395732
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0385859
KPNB1 karyopherin (importin) beta 1 -0.0385009
ZMYM2 zinc finger, MYM-type 2 -0.0374813
VDAC1 voltage-dependent anion channel 1 -0.0369524
KMT2E lysine (K)-specific methyltransferase 2E -0.0367259
RTN4 reticulon 4 -0.0358979
KMT5B lysine methyltransferase 5B -0.0342642
RPL35A ribosomal protein L35a -0.0339497
XPO1 exportin 1 -0.0338418
IGF2 insulin-like growth factor 2 -0.0337918
ZNF292 zinc finger protein 292 -0.033544
BIRC6 baculoviral IAP repeat containing 6 -0.0330598
PCBP2 poly(rC) binding protein 2 -0.0326398
RBM25 RNA binding motif protein 25 -0.0318275
PHF20 PHD finger protein 20 -0.0313142
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0310987
FMNL2 formin-like 2 -0.0306437
BRWD1 bromodomain and WD repeat domain containing 1 -0.0304841
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0301956
USP34 ubiquitin specific peptidase 34 -0.0299979
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0298384
RAD51B RAD51 paralog B -0.0294349
MON2 MON2 homolog (S. cerevisiae) -0.0292577
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0289438
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0285896
HMGA1 high mobility group AT-hook 1 -0.0285355
ZNF148 zinc finger protein 148 -0.0284504
NIPBL Nipped-B homolog (Drosophila) -0.0281943
NPEPPS aminopeptidase puromycin sensitive -0.0278338
PTK2 protein tyrosine kinase 2 -0.0275899
SETD5 SET domain containing 5 -0.0274624
ZNF207 zinc finger protein 207 -0.0273856
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0270144
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.026981
RUSC2 RUN and SH3 domain containing 2 -0.0268798
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.026855
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0267145
TFG TRK-fused gene -0.0267062
THSD4 thrombospondin, type I, domain containing 4 -0.0266804
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0265633
SINHCAF SIN3-HDAC complex associated factor -0.0263811
SCAF11 SR-related CTD-associated factor 11 -0.0263064
BRWD3 bromodomain and WD repeat domain containing 3 -0.0260999
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0260109
PCNX1 pecanex 1 -0.0255376
ANKRD28 ankyrin repeat domain 28 -0.0255133
TXNRD1 thioredoxin reductase 1 -0.0253903
ATXN2 ataxin 2 -0.0251876
TNPO3 transportin 3 -0.025173
FBXO11 F-box protein 11 -0.0251684
AVL9 AVL9 homolog (S. cerevisiase) -0.025077
RBM39 RNA binding motif protein 39 -0.0248305
PNISR PNN-interacting serine/arginine-rich protein -0.024829
GNAS GNAS complex locus -0.0246669
TMSB10 thymosin beta 10 -0.0246299
OGA O-GlcNAcase -0.0244882
AFF3 AF4/FMR2 family, member 3 -0.0241566
SBF2 SET binding factor 2 -0.0235507
IKBIP IKBKB interacting protein -0.0235228
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0232724
TBK1 TANK-binding kinase 1 -0.023162
OSMR oncostatin M receptor -0.0230647
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0230447
NF1 neurofibromin 1 -0.0228937
NEMF nuclear export mediator factor -0.0227816
UBA6 ubiquitin-like modifier activating enzyme 6 -0.022682
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0225151
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0224228
NKTR natural killer cell triggering receptor -0.0223923
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0218855
CDK19 cyclin-dependent kinase 19 -0.0218598
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0217411
SNX9 sorting nexin 9 -0.0216716
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0216591
TLK1 tousled-like kinase 1 -0.0214261
MARCHF6 membrane associated ring-CH-type finger 6 -0.0213548
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0212737
UBE2K ubiquitin-conjugating enzyme E2K -0.0212366
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0212027
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0210024