Brivudine_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Brivudine perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Brivudine_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.237729
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.212807
PABPC1 poly(A) binding protein, cytoplasmic 1 0.203951
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.179003
PTMA prothymosin, alpha 0.140666
APLP2 amyloid beta (A4) precursor-like protein 2 0.126494
FTL ferritin, light polypeptide 0.105784
CALR calreticulin 0.101102
UBC ubiquitin C 0.100875
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0963953
ACTG1 actin gamma 1 0.0810279
MYH9 myosin, heavy chain 9, non-muscle 0.0785202
ASPH aspartate beta-hydroxylase 0.0733276
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0720081
EEF2 eukaryotic translation elongation factor 2 0.0703895
LDHA lactate dehydrogenase A 0.0676374
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0663513
ENO1 enolase 1, (alpha) 0.0614921
RPS3 ribosomal protein S3 0.059739
POTEF POTE ankyrin domain family, member F 0.0582105
GOLGA4 golgin A4 0.0569753
CANX calnexin 0.0552414
ADAM9 ADAM metallopeptidase domain 9 0.0536115
SPAG9 sperm associated antigen 9 0.0529595
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0516348
AKAP13 A kinase (PRKA) anchor protein 13 0.051634
SDC4 syndecan 4 0.0514201
TPM3 tropomyosin 3 0.0513289
FN1 fibronectin 1 0.0497357
MYO6 myosin VI 0.0484453
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0478145
CCNL1 cyclin L1 0.0476835
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0462469
ZSWIM6 zinc finger, SWIM-type containing 6 0.0452279
PRRC2C proline-rich coiled-coil 2C 0.0449831
COPA coatomer protein complex, subunit alpha 0.0443324
CALU calumenin 0.0440225
RBM25 RNA binding motif protein 25 0.0436188
PKM pyruvate kinase, muscle 0.0435434
SLC38A1 solute carrier family 38, member 1 0.0434558
YTHDC1 YTH domain containing 1 0.0432343
SMYD3 SET and MYND domain containing 3 0.0431203
TPR translocated promoter region, nuclear basket protein 0.0429062
EZR ezrin 0.0425105
EEF1G eukaryotic translation elongation factor 1 gamma 0.0422533
RHOA ras homolog family member A 0.0421689
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0418506
KDM5B lysine (K)-specific demethylase 5B 0.0417432
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0413968
PCBP2 poly(rC) binding protein 2 0.040324
RNF145 ring finger protein 145 0.0402739
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0401607
RPL3 ribosomal protein L3 0.039822
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0393617
MSN moesin 0.0383183
FLNB filamin B, beta 0.038309
KMT2E lysine (K)-specific methyltransferase 2E 0.0381052
KTN1 kinectin 1 (kinesin receptor) 0.0378022
PGK1 phosphoglycerate kinase 1 0.0371295
TSC22D2 TSC22 domain family, member 2 0.0360996
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0360903
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0352817
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.035232
RACK1 receptor for activated C kinase 1 0.0345035
HMGB2 high mobility group box 2 0.0343174
HSPA8 heat shock 70kDa protein 8 0.0339049
FXR1 fragile X mental retardation, autosomal homolog 1 0.0337519
KMT2C lysine (K)-specific methyltransferase 2C 0.0336072
CSDE1 cold shock domain containing E1, RNA-binding 0.0335531
RPL8 ribosomal protein L8 0.0333988
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0333905
EPS8 epidermal growth factor receptor pathway substrate 8 0.0329341
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0327967
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0327473
MBNL1 muscleblind-like splicing regulator 1 0.0326837
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0326374
FAM13A family with sequence similarity 13, member A 0.031944
AREG amphiregulin 0.0318915
ALCAM activated leukocyte cell adhesion molecule 0.0317968
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0316491
NAP1L1 nucleosome assembly protein 1-like 1 0.0311002
VEGFA vascular endothelial growth factor A 0.0307878
SRPK2 SRSF protein kinase 2 0.0306783
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0306716
H1-0 H1.0 linker histone 0.0306448
OSBPL8 oxysterol binding protein-like 8 0.030596
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0305613
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0305572
MYO10 myosin X 0.0303974
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0302062
TMF1 TATA element modulatory factor 1 0.0300765
EIF4A2 eukaryotic translation initiation factor 4A2 0.0299395
RPS13 ribosomal protein S13 0.0296304
RBM39 RNA binding motif protein 39 0.02958
ERBIN erbb2 interacting protein 0.0294252
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0294215
ENAH enabled homolog (Drosophila) 0.0293722
TRIO trio Rho guanine nucleotide exchange factor 0.0291142
CHD1 chromodomain helicase DNA binding protein 1 0.0290568
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0290191

decreased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0732393
CCND1 cyclin D1 -0.0383433
LPP LIM domain containing preferred translocation partner in lipoma -0.0363803
EFNA5 ephrin-A5 -0.0311537
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0297647
SAMD4A sterile alpha motif domain containing 4A -0.0280662
IGFBP3 insulin-like growth factor binding protein 3 -0.0260886
FBXO32 F-box protein 32 -0.0260175
IFI27 interferon, alpha-inducible protein 27 -0.0238012
IFI6 interferon, alpha-inducible protein 6 -0.0229112
NDRG1 N-myc downstream regulated 1 -0.0222736
PLSCR1 phospholipid scramblase 1 -0.0205272
RPL35A ribosomal protein L35a -0.0204342
NAV2 neuron navigator 2 -0.0198701
MX2 MX dynamin-like GTPase 2 -0.0197621
CSTB cystatin B (stefin B) -0.0196352
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0188402
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.018093
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0180539
OCLN occludin -0.0177717
DSG2 desmoglein 2 -0.0164964
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0160686
TMSB10 thymosin beta 10 -0.015658
LMO7 LIM domain 7 -0.0145641
NRIP1 nuclear receptor interacting protein 1 -0.0143266
IFITM3 interferon induced transmembrane protein 3 -0.0136411
FBXO34 F-box protein 34 -0.0136208
PLAU plasminogen activator, urokinase -0.0135778
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0135747
ARHGAP20 Rho GTPase activating protein 20 -0.012943
CAB39 calcium binding protein 39 -0.0127479
HMGA1 high mobility group AT-hook 1 -0.0126936
LRMDA leucine rich melanocyte differentiation associated -0.0125759
LAMB3 laminin, beta 3 -0.012299
GRB10 growth factor receptor-bound protein 10 -0.0122778
FTH1 ferritin, heavy polypeptide 1 -0.0120333
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0118881
CAPN2 calpain 2, (m/II) large subunit -0.011844
IFI44L interferon-induced protein 44-like -0.0111703
MX1 MX dynamin-like GTPase 1 -0.0111438
ISG15 ISG15 ubiquitin-like modifier -0.0111154
ARF1 ADP-ribosylation factor 1 -0.0110775
CDCP1 CUB domain containing protein 1 -0.0110225
SVIL supervillin -0.0109732
VGLL3 vestigial-like family member 3 -0.0107582
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0107358
NRP1 neuropilin 1 -0.010584
MACC1 metastasis associated in colon cancer 1 -0.0105694
ZHX2 zinc fingers and homeoboxes 2 -0.0105254
WARS1 tryptophanyl-tRNA synthetase 1 -0.0103657
IFI16 interferon, gamma-inducible protein 16 -0.010353
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0103139
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0101536
S100A10 S100 calcium binding protein A10 -0.0101061
RAB27B RAB27B, member RAS oncogene family -0.0100385
LOXL2 lysyl oxidase-like 2 -0.00976294
ANTXR2 anthrax toxin receptor 2 -0.00967171
MRPS6 mitochondrial ribosomal protein S6 -0.00964576
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.00957576
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.00944612
LIMCH1 LIM and calponin homology domains 1 -0.00943418
F3 coagulation factor III (thromboplastin, tissue factor) -0.00940498
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.00939881
PARP9 poly (ADP-ribose) polymerase family, member 9 -0.00932894
SOX4 SRY (sex determining region Y)-box 4 -0.00906925
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.00896886
TTC9 tetratricopeptide repeat domain 9 -0.00896276
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2 -0.00856954
SACK1A scaffolding CK1 anchoring protein A -0.00845216
S100A4 S100 calcium binding protein A4 -0.00824037
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.00810615
ITGB8 integrin, beta 8 -0.00809008
LY6E lymphocyte antigen 6 complex, locus E -0.00795772
PLAUR plasminogen activator, urokinase receptor -0.00791174
RAB1B RAB1B, member RAS oncogene family -0.0078887
HLA-B major histocompatibility complex, class I, B -0.00777572
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.00771237
NT5E 5'-nucleotidase, ecto (CD73) -0.00770675
RAI14 retinoic acid induced 14 -0.00769584
IFITM1 interferon induced transmembrane protein 1 -0.00769141
NSD1 nuclear receptor binding SET domain protein 1 -0.00767851
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.00756141
HMGA2 high mobility group AT-hook 2 -0.00753907
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.00751246
DTNA dystrobrevin, alpha -0.00749334
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 -0.0074605
TMEM62 transmembrane protein 62 -0.00744235
BMAL2 basic helix-loop-helix ARNT like 2 -0.0072706
KLF7 Kruppel-like factor 7 (ubiquitous) -0.00722499
RBM47 RNA binding motif protein 47 -0.00722257
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.00721057
ATXN10 ataxin 10 -0.00716925
CTSS cathepsin S -0.0070925
TJP2 tight junction protein 2 -0.00705934
TMEM117 transmembrane protein 117 -0.00702754
PATJ PATJ crumbs cell polarity complex component -0.00701607
TUBB tubulin, beta class I -0.00700205
IRF9 interferon regulatory factor 9 -0.00698176
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.00698139
ITGB4 integrin, beta 4 -0.00691254