Budesonide_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Budesonide perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Budesonide_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.250562
IGF2 insulin-like growth factor 2 0.231756
NRG1 neuregulin 1 0.114011
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.091105
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0862129
FAM13A family with sequence similarity 13, member A 0.0659644
PCBP3 poly(rC) binding protein 3 0.0562223
MEF2A myocyte enhancer factor 2A 0.054618
PLAT plasminogen activator, tissue 0.0507152
FNBP1 formin binding protein 1 0.0392243
TRIO trio Rho guanine nucleotide exchange factor 0.0331334
ZMIZ1 zinc finger, MIZ-type containing 1 0.0319745
CENPF centromere protein F, 350/400kDa 0.0319484
STC1 stanniocalcin 1 0.0319386
MKI67 marker of proliferation Ki-67 0.0318417
SDK1 sidekick cell adhesion molecule 1 0.0316714
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.0312519
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0304094
KIAA1217 KIAA1217 0.0283741
ZNF292 zinc finger protein 292 0.027763
SSBP3 single stranded DNA binding protein 3 0.0275698
ANTXR1 anthrax toxin receptor 1 0.0273658
ADARB1 adenosine deaminase, RNA-specific, B1 0.0265934
PTPRM protein tyrosine phosphatase, receptor type, M 0.0265172
RPTOR regulatory associated protein of MTOR, complex 1 0.0259726
FKBP5 FK506 binding protein 5 0.0258202
PER1 period circadian clock 1 0.0250637
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0248735
NCOR2 nuclear receptor corepressor 2 0.0246132
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.024478
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0241856
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0218731
H1-0 H1.0 linker histone 0.0218328
ANGPTL4 angiopoietin-like 4 0.0218107
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0214323
KLF9 Kruppel-like factor 9 0.0209857
HMGA2 high mobility group AT-hook 2 0.0208804
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0207229
DNMBP dynamin binding protein 0.0205711
CA12 carbonic anhydrase XII 0.0193366
RARA retinoic acid receptor, alpha 0.0191639
UBE2O ubiquitin-conjugating enzyme E2O 0.0189743
SEPTIN9 septin 9 0.0189504
SCG2 secretogranin II 0.0186939
NRIP1 nuclear receptor interacting protein 1 0.0183545
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0180699
MIDEAS mitotic deacetylase associated SANT domain protein 0.0179091
YME1L1 YME1-like 1 ATPase 0.0173861
TRIM25 tripartite motif containing 25 0.0173779
SOX9 SRY (sex determining region Y)-box 9 0.0170131
RBMS1 RNA binding motif, single stranded interacting protein 1 0.0169662
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0167804
SMAD3 SMAD family member 3 0.0166449
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.016588
GNG2 guanine nucleotide binding protein (G protein), gamma 2 0.0165464
ZNF638 zinc finger protein 638 0.0163886
PCGF2 polycomb group ring finger 2 0.016351
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0162965
ESYT2 extended synaptotagmin-like protein 2 0.0161891
FAM219A family with sequence similarity 219, member A 0.0161328
RNF24 ring finger protein 24 0.0161321
EPAS1 endothelial PAS domain protein 1 0.0158859
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0157527
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0157149
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.0154867
ATXN2L ataxin 2-like 0.0152831
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0149432
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0149065
RNF150 ring finger protein 150 0.0148958
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0147664
DLG5 discs, large homolog 5 (Drosophila) 0.014644
CSNK1D casein kinase 1, delta 0.0146059
SRRM2 serine/arginine repetitive matrix 2 0.0146023
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.0145644
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0144616
UBAP2L ubiquitin associated protein 2-like 0.014401
RUNX1 runt-related transcription factor 1 0.0143599
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0143338
ARRDC3 arrestin domain containing 3 0.0141814
ELL2 elongation factor, RNA polymerase II, 2 0.0140996
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.013925
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.0138679
UBE2E3 ubiquitin-conjugating enzyme E2E 3 0.0138677
GPC5 glypican 5 0.013839
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0137676
ARHGAP9 Rho GTPase activating protein 9 0.013735
NIBAN2 niban apoptosis regulator 2 0.0136182
METTL15 methyltransferase like 15 0.0136024
PTPRE protein tyrosine phosphatase, receptor type, E 0.013531
SCLT1 sodium channel and clathrin linker 1 0.0133841
LENG8 leukocyte receptor cluster (LRC) member 8 0.0133774
MLXIP MLX interacting protein 0.0132122
PHF3 PHD finger protein 3 0.0131528
FLNB filamin B, beta 0.0131423
FER fer (fps/fes related) tyrosine kinase 0.0131076
CENPE centromere protein E, 312kDa 0.0130988
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0130797
FNDC3B fibronectin type III domain containing 3B 0.0129189
NT5C2 5'-nucleotidase, cytosolic II 0.012886
TBC1D9B TBC1 domain family, member 9B (with GRAM domain) 0.0127826

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.274373
LSAMP limbic system-associated membrane protein -0.115328
LPIN1 lipin 1 -0.0904694
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0747069
EXT1 exostosin glycosyltransferase 1 -0.0660709
VIM vimentin -0.0648483
COL3A1 collagen, type III, alpha 1 -0.062748
COL1A1 collagen, type I, alpha 1 -0.0600791
PTMA prothymosin, alpha -0.0527846
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0501941
DST dystonin -0.0497765
NALF1 NALCN channel auxiliary factor 1 -0.0481308
ACTG1 actin gamma 1 -0.0463297
RPS6 ribosomal protein S6 -0.0451296
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0448123
SYT1 synaptotagmin I -0.0441989
FMN1 formin 1 -0.0414852
ENAH enabled homolog (Drosophila) -0.0413964
GREM2 gremlin 2, DAN family BMP antagonist -0.0411739
RPL35A ribosomal protein L35a -0.0401623
RPL23 ribosomal protein L23 -0.0386808
TPT1 tumor protein, translationally-controlled 1 -0.0386602
SLIT2 slit homolog 2 (Drosophila) -0.0374418
MYO6 myosin VI -0.0373914
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0373617
ZFAND3 zinc finger, AN1-type domain 3 -0.0372223
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0349794
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0348015
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0347848
LMNA lamin A/C -0.0347781
PTPRD protein tyrosine phosphatase, receptor type, D -0.0340727
NREP neuronal regeneration related protein -0.0335361
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0335212
RPL9 ribosomal protein L9 -0.0331493
PRKCA protein kinase C, alpha -0.0326749
KLHL13 kelch-like family member 13 -0.0320906
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0318148
GLG1 golgi glycoprotein 1 -0.0317226
SEC31A SEC31 homolog A (S. cerevisiae) -0.0315161
SSBP2 single-stranded DNA binding protein 2 -0.0310071
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0303053
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0301863
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0299929
CANX calnexin -0.029989
AHNAK AHNAK nucleoprotein -0.0299682
ZNF804A zinc finger protein 804A -0.0293745
PKM pyruvate kinase, muscle -0.0291191
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0281611
RPL37A ribosomal protein L37a -0.028114
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0280813
TRA2A transformer 2 alpha homolog (Drosophila) -0.0279933
ANXA2 annexin A2 -0.0277646
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0276812
VDAC1 voltage-dependent anion channel 1 -0.0276702
RGS5 regulator of G-protein signaling 5 -0.0270777
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0268668
TLK2 tousled-like kinase 2 -0.026859
RPL34 ribosomal protein L34 -0.0268545
PDIA3 protein disulfide isomerase family A, member 3 -0.0268206
BPTF bromodomain PHD finger transcription factor -0.0268102
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0266032
JMJD1C jumonji domain containing 1C -0.0265406
TPST1 tyrosylprotein sulfotransferase 1 -0.0265121
RPS3 ribosomal protein S3 -0.0263379
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0254924
MAP1B microtubule-associated protein 1B -0.0254823
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.025451
TRIM24 tripartite motif containing 24 -0.0238489
SOX4 SRY (sex determining region Y)-box 4 -0.0238216
ZBTB20 zinc finger and BTB domain containing 20 -0.0238097
SIK2 salt-inducible kinase 2 -0.0234753
THBS1 thrombospondin 1 -0.0234153
PTK2 protein tyrosine kinase 2 -0.0231818
VCL vinculin -0.0231174
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0229282
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0227524
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0227418
MRTFA myocardin related transcription factor A -0.0225576
MATR3 matrin 3 -0.0225062
TPM4 tropomyosin 4 -0.022505
NAP1L1 nucleosome assembly protein 1-like 1 -0.0224294
FRMD4A FERM domain containing 4A -0.0220519
CUX1 cut-like homeobox 1 -0.0219642
XPO1 exportin 1 -0.0219181
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.02184
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0218279
DNAH14 dynein, axonemal, heavy chain 14 -0.0217278
RPL30 ribosomal protein L30 -0.0216657
FN1 fibronectin 1 -0.0214743
GPBP1 GC-rich promoter binding protein 1 -0.0212732
ARHGAP32 Rho GTPase activating protein 32 -0.0210959
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0210521
TMSB10 thymosin beta 10 -0.0210353
POTEF POTE ankyrin domain family, member F -0.0206275
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0206209
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0206029
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0204227
BRWD1 bromodomain and WD repeat domain containing 1 -0.0202349
CHD9 chromodomain helicase DNA binding protein 9 -0.0202043
CALR calreticulin -0.0201527