Budesonide_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Budesonide perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Budesonide_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.392915
C3 complement component 3 0.175502
ERRFI1 ERBB receptor feedback inhibitor 1 0.134475
IGF2 insulin-like growth factor 2 0.119012
TIMP1 TIMP metallopeptidase inhibitor 1 0.0942901
MT2A metallothionein 2A 0.0900771
GPC6 glypican 6 0.0856624
FN1 fibronectin 1 0.07563
APOB apolipoprotein B 0.0734707
FKBP5 FK506 binding protein 5 0.0672152
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0627888
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.060882
EPAS1 endothelial PAS domain protein 1 0.0588857
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0557954
TNS1 tensin 1 0.0535133
TRIO trio Rho guanine nucleotide exchange factor 0.0484877
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0467755
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0444194
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0427748
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0413774
SRRM2 serine/arginine repetitive matrix 2 0.0408055
MACF1 microtubule-actin crosslinking factor 1 0.0391226
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0391195
NCOR2 nuclear receptor corepressor 2 0.0386666
RPL37A ribosomal protein L37a 0.0369567
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0364474
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.035902
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0344688
SMAD3 SMAD family member 3 0.0337383
FGA fibrinogen alpha chain 0.0334612
PRELID2 PRELI domain containing 2 0.0329708
RPS12 ribosomal protein S12 0.0323262
PDGFC platelet derived growth factor C 0.0321749
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0318109
FERMT2 fermitin family member 2 0.0314526
CRLS1 cardiolipin synthase 1 0.0310633
BHLHE40 basic helix-loop-helix family, member e40 0.0309486
FLNA filamin A, alpha 0.0302979
IL4R interleukin 4 receptor 0.0287491
POTEF POTE ankyrin domain family, member F 0.0286216
IQSEC1 IQ motif and Sec7 domain 1 0.02772
LAMB1 laminin, beta 1 0.0271518
FTH1 ferritin, heavy polypeptide 1 0.0261833
TGFBI transforming growth factor, beta-induced, 68kDa 0.0258371
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0257369
TGM2 transglutaminase 2 0.025714
ZFP36L2 ZFP36 ring finger protein-like 2 0.0252757
BRD4 bromodomain containing 4 0.0248174
ABTB3 ankyrin repeat and BTB domain containing 3 0.0247116
ZNF292 zinc finger protein 292 0.0247012
GSE1 Gse1 coiled-coil protein 0.0244633
AKAP13 A kinase (PRKA) anchor protein 13 0.0244292
ZMIZ1 zinc finger, MIZ-type containing 1 0.0237295
EIF4B eukaryotic translation initiation factor 4B 0.022916
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0226948
MRTFA myocardin related transcription factor A 0.0226145
IFNGR1 interferon gamma receptor 1 0.0222239
PRRC2A proline-rich coiled-coil 2A 0.0221257
CAMTA1 calmodulin binding transcription activator 1 0.0220258
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0218529
CABIN1 calcineurin binding protein 1 0.0217594
PPARD peroxisome proliferator-activated receptor delta 0.0215823
BCL2L1 BCL2-like 1 0.0215497
CAPZB capping protein (actin filament) muscle Z-line, beta 0.0214614
VCL vinculin 0.0213597
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0213051
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0212113
MED13L mediator complex subunit 13-like 0.0211342
PICALM phosphatidylinositol binding clathrin assembly protein 0.0210246
BABAM2 BRISC and BRCA1 A complex member 2 0.0207533
DNAH5 dynein, axonemal, heavy chain 5 0.0206383
RPS17 ribosomal protein S17 0.0206052
ADARB1 adenosine deaminase, RNA-specific, B1 0.0204078
TOP1 topoisomerase (DNA) I 0.0198822
USP47 ubiquitin specific peptidase 47 0.0196685
VIL1 villin 1 0.0196152
KDM4B lysine (K)-specific demethylase 4B 0.019575
DIAPH1 diaphanous-related formin 1 0.019522
MYH9 myosin, heavy chain 9, non-muscle 0.0194884
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0194247
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0190284
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0189233
LPIN2 lipin 2 0.0188835
PCSK6 proprotein convertase subtilisin/kexin type 6 0.0188664
ALPK2 alpha-kinase 2 0.018768
ARHGAP9 Rho GTPase activating protein 9 0.0187273
NCOA3 nuclear receptor coactivator 3 0.0184685
PAWR PRKC, apoptosis, WT1, regulator 0.0181744
SMOC1 SPARC related modular calcium binding 1 0.018121
FHIT fragile histidine triad 0.0180283
FOXO3 forkhead box O3 0.0180117
AGRN agrin 0.0177152
HPCAL1 hippocalcin-like 1 0.0176522
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0175404
CHKA choline kinase alpha 0.0174263
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0173368
A1CF APOBEC1 complementation factor 0.0173097
MBNL3 muscleblind-like splicing regulator 3 0.0172732
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0169198
SH3BP4 SH3-domain binding protein 4 0.0167795

decreased expression

Symbol Name Standardized Value
FBF1 Fas (TNFRSF6) binding factor 1 -0.192391
MAML2 mastermind-like 2 (Drosophila) -0.112488
EHBP1 EH domain binding protein 1 -0.103181
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.10048
PEG3 paternally expressed 3 -0.0961533
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0931226
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.087403
TMEM123 transmembrane protein 123 -0.0824613
EML4 echinoderm microtubule associated protein like 4 -0.0780181
TRIM26 tripartite motif containing 26 -0.0763763
DST dystonin -0.0743122
TPT1 tumor protein, translationally-controlled 1 -0.0738583
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0723023
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0721362
FRMD5 FERM domain containing 5 -0.0718367
GPC3 glypican 3 -0.0716534
CP ceruloplasmin (ferroxidase) -0.0669199
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0652333
TM4SF1 transmembrane 4 L six family member 1 -0.0606477
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0597009
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0588027
DSPP dentin sialophosphoprotein -0.0583101
ENO1 enolase 1, (alpha) -0.0543275
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0534125
SESTD1 SEC14 and spectrin domains 1 -0.0532507
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0514722
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0503569
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0488068
SLC38A1 solute carrier family 38, member 1 -0.048171
OSBPL10 oxysterol binding protein-like 10 -0.0480689
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0476034
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0474921
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0469385
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0468509
CANX calnexin -0.0464623
LYZ lysozyme -0.0455671
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0454581
FNDC3B fibronectin type III domain containing 3B -0.0443999
GCC2 GRIP and coiled-coil domain containing 2 -0.0441035
RPS6 ribosomal protein S6 -0.0439644
AHSG alpha-2-HS-glycoprotein -0.0433687
ZBTB20 zinc finger and BTB domain containing 20 -0.0430802
GMDS GDP-mannose 4,6-dehydratase -0.0418636
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0412544
CNKSR3 CNKSR family member 3 -0.0409414
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0403752
CPE carboxypeptidase E -0.0399031
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0394807
CFB complement factor B -0.0384678
NHSL1 NHS-like 1 -0.0377532
TXNRD1 thioredoxin reductase 1 -0.0376969
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0374693
ELL2 elongation factor, RNA polymerase II, 2 -0.0372949
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0372624
STAU1 staufen double-stranded RNA binding protein 1 -0.0370009
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0368261
KIF5B kinesin family member 5B -0.0367036
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0366269
SDC4 syndecan 4 -0.0360287
B2M beta-2-microglobulin -0.0355323
RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 -0.0354431
JMJD1C jumonji domain containing 1C -0.0351101
APOE apolipoprotein E -0.0346111
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0344222
NIPBL Nipped-B homolog (Drosophila) -0.0344131
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.034259
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0341903
IER3 immediate early response 3 -0.0341805
RPS27A ribosomal protein S27a -0.0339405
FTL ferritin, light polypeptide -0.0338784
SAMD4A sterile alpha motif domain containing 4A -0.0338537
TPM4 tropomyosin 4 -0.033778
PERP PERP, TP53 apoptosis effector -0.0334591
SELENOP selenoprotein P -0.0333182
RAB1A RAB1A, member RAS oncogene family -0.0330684
EIF3A eukaryotic translation initiation factor 3, subunit A -0.03277
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0321092
AMBP alpha-1-microglobulin/bikunin precursor -0.0319759
NPAS2 neuronal PAS domain protein 2 -0.0317991
RNF213 ring finger protein 213 -0.0317545
PEG10 paternally expressed 10 -0.0315937
UTRN utrophin -0.0313753
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0312611
GNAS GNAS complex locus -0.031234
NKD1 naked cuticle homolog 1 (Drosophila) -0.0307442
MBNL2 muscleblind-like splicing regulator 2 -0.0305192
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0304628
ARHGAP18 Rho GTPase activating protein 18 -0.0303927
PARD3 par-3 family cell polarity regulator -0.0301086
GK glycerol kinase -0.0300781
PDGFB platelet-derived growth factor beta polypeptide -0.0300041
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0299708
RBM39 RNA binding motif protein 39 -0.02962
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0292038
DLC1 DLC1 Rho GTPase activating protein -0.0286428
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0284565
RPS24 ribosomal protein S24 -0.0283755
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0280255
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0279554
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.027571