Busulfan_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Busulfan perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Busulfan_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TP63 tumor protein p63 0.16236
PSD3 pleckstrin and Sec7 domain containing 3 0.107184
DST dystonin 0.104468
VCL vinculin 0.0923106
CD44 CD44 molecule (Indian blood group) 0.09163
DPYD dihydropyrimidine dehydrogenase 0.0766479
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0745242
CADM2 cell adhesion molecule 2 0.0706991
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0681369
HLA-B major histocompatibility complex, class I, B 0.0652812
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0615582
RAD51B RAD51 paralog B 0.0585819
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0543226
RIGI RNA sensor RIG-I 0.0535767
SP100 SP100 nuclear antigen 0.0527944
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0523719
BIRC3 baculoviral IAP repeat containing 3 0.0509226
NPAS2 neuronal PAS domain protein 2 0.0507198
PRELID2 PRELI domain containing 2 0.048314
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0479957
HDAC9 histone deacetylase 9 0.0463771
RUNX1 runt-related transcription factor 1 0.044184
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0426061
ZDHHC14 zinc finger, DHHC-type containing 14 0.0425242
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0383887
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0382949
TSC22D1 TSC22 domain family, member 1 0.0382093
BCAR3 breast cancer anti-estrogen resistance 3 0.0346874
IFIH1 interferon induced with helicase C domain 1 0.0344317
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0341516
CFAP299 cilia and flagella associated protein 299 0.0331858
DPH6 diphthamine biosynthesis 6 0.0329805
NCEH1 neutral cholesterol ester hydrolase 1 0.0328612
RPL37A ribosomal protein L37a 0.0303583
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0301164
TPRG1 tumor protein p63 regulated 1 0.0301156
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0292038
PLSCR1 phospholipid scramblase 1 0.0291514
WWTR1 WW domain containing transcription regulator 1 0.0280721
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0280265
SMYD3 SET and MYND domain containing 3 0.0278613
DNAH14 dynein, axonemal, heavy chain 14 0.0277011
EPHA4 EPH receptor A4 0.0274226
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0268531
HLA-E major histocompatibility complex, class I, E 0.025968
EXOC4 exocyst complex component 4 0.0256217
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0245024
B2M beta-2-microglobulin 0.0244408
LOC102724023 ES1 protein homolog, mitochondrial 0.0243039
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0240877
ZSWIM6 zinc finger, SWIM-type containing 6 0.0239503
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0229991
CDK6 cyclin-dependent kinase 6 0.0229833
RPS29 ribosomal protein S29 0.0228994
EFNA5 ephrin-A5 0.0225521
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0221542
NT5E 5'-nucleotidase, ecto (CD73) 0.0217971
ZBTB20 zinc finger and BTB domain containing 20 0.0217661
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0215774
RPL35A ribosomal protein L35a 0.0215342
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0210403
FHIT fragile histidine triad 0.0204692
RPL38 ribosomal protein L38 0.0203718
MBD5 methyl-CpG binding domain protein 5 0.0202587
INTS6 integrator complex subunit 6 0.0199651
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0195717
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0192037
IFI6 interferon, alpha-inducible protein 6 0.0190358
EXT1 exostosin glycosyltransferase 1 0.0188789
CUX1 cut-like homeobox 1 0.0185473
EHBP1 EH domain binding protein 1 0.0183546
RPS10 ribosomal protein S10 0.0182114
GOLGB1 golgin B1 0.0182103
ENO1 enolase 1, (alpha) 0.0177548
NEK10 NIMA-related kinase 10 0.0176978
CCDC190 coiled-coil domain containing 190 0.0174412
RTTN rotatin 0.0172584
KPNB1 karyopherin (importin) beta 1 0.0171749
DTNB dystrobrevin, beta 0.0170907
PRKCE protein kinase C, epsilon 0.0170418
ETV6 ets variant 6 0.0170403
NRG1 neuregulin 1 0.0170159
CCDC88A coiled-coil domain containing 88A 0.0169929
FERMT1 fermitin family member 1 0.0164717
TRIM55 tripartite motif containing 55 0.0163401
PRH1 proline-rich protein HaeIII subfamily 1 0.0162204
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0161671
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 0.0161324
RPS3 ribosomal protein S3 0.0156244
RPL31 ribosomal protein L31 0.0154992
NALF1 NALCN channel auxiliary factor 1 0.0153926
HLA-A major histocompatibility complex, class I, A 0.0150838
OASL 2'-5'-oligoadenylate synthetase-like 0.0150453
NCOA2 nuclear receptor coactivator 2 0.0150408
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0150265
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0149143
ZNFX1 zinc finger, NFX1-type containing 1 0.0148678
RNF213 ring finger protein 213 0.0147287
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0147281
RPL9 ribosomal protein L9 0.0146653

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.156356
TMSB10 thymosin beta 10 -0.142696
VIM vimentin -0.123344
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.111182
TXNRD1 thioredoxin reductase 1 -0.0936186
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0896618
RAI1 retinoic acid induced 1 -0.0856926
MT2A metallothionein 2A -0.0828928
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0762428
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0739406
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0722672
MT1X metallothionein 1X -0.0661487
POTEF POTE ankyrin domain family, member F -0.0642438
EEF2 eukaryotic translation elongation factor 2 -0.0629743
TM4SF1 transmembrane 4 L six family member 1 -0.0623995
PTMA prothymosin, alpha -0.0622482
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0611939
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.061178
GARS1 glycyl-tRNA synthetase 1 -0.0599148
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0558921
AHNAK AHNAK nucleoprotein -0.0552508
SLC38A2 solute carrier family 38, member 2 -0.0545334
CANX calnexin -0.0464773
PRRC2C proline-rich coiled-coil 2C -0.0435062
MACF1 microtubule-actin crosslinking factor 1 -0.0425426
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0417499
APP amyloid beta (A4) precursor protein -0.0417201
EZR ezrin -0.0409922
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0405515
LOC112694756 uncharaterized LOC112694756 -0.0400692
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0393059
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0392704
ARHGAP5 Rho GTPase activating protein 5 -0.0388844
DSCAM Down syndrome cell adhesion molecule -0.0387642
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0383493
USP34 ubiquitin specific peptidase 34 -0.0381237
KLF6 Kruppel-like factor 6 -0.0379789
KMT2E lysine (K)-specific methyltransferase 2E -0.0373809
YEATS2 YEATS domain containing 2 -0.0368505
TXNIP thioredoxin interacting protein -0.0367486
FLNB filamin B, beta -0.0360323
ADAM17 ADAM metallopeptidase domain 17 -0.0354246
ZMYND8 zinc finger, MYND-type containing 8 -0.0351251
RTN4 reticulon 4 -0.0349897
AFF4 AF4/FMR2 family, member 4 -0.0344932
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0341384
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0339634
TMEM41B transmembrane protein 41B -0.0338644
POM121 POM121 transmembrane nucleoporin -0.0322553
CSDE1 cold shock domain containing E1, RNA-binding -0.0318205
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0311894
HMGA1 high mobility group AT-hook 1 -0.0311363
ANKRD11 ankyrin repeat domain 11 -0.0309991
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0309668
RBM25 RNA binding motif protein 25 -0.0306355
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma -0.0304796
CENPF centromere protein F, 350/400kDa -0.0298377
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.029669
SEC24A SEC24 family member A -0.0291625
HDLBP high density lipoprotein binding protein -0.0290235
RAP2B RAP2B, member of RAS oncogene family -0.0285901
CEP170 centrosomal protein 170kDa -0.0285739
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.028478
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0284162
BRWD1 bromodomain and WD repeat domain containing 1 -0.0283721
GSK3B glycogen synthase kinase 3 beta -0.027991
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0273989
NUP58 nucleoporin 58 -0.0272007
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0271642
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0270193
FTH1 ferritin, heavy polypeptide 1 -0.0268371
SRPK2 SRSF protein kinase 2 -0.0265482
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0263836
UBC ubiquitin C -0.0262437
SNX14 sorting nexin 14 -0.0260421
PDIA3 protein disulfide isomerase family A, member 3 -0.0258972
NAMPT nicotinamide phosphoribosyltransferase -0.0257901
MKI67 marker of proliferation Ki-67 -0.0257645
TMSB4X thymosin beta 4, X-linked -0.025652
GOLGA4 golgin A4 -0.0255461
PFN1 profilin 1 -0.0252123
ZNF292 zinc finger protein 292 -0.0250408
PCBP2 poly(rC) binding protein 2 -0.0249661
SBF2 SET binding factor 2 -0.0248999
HOOK2 hook microtubule-tethering protein 2 -0.0247632
IARS1 isoleucyl-tRNA synthetase 1 -0.0244209
CELF1 CUGBP, Elav-like family member 1 -0.0240118
QKI QKI, KH domain containing, RNA binding -0.0239386
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0238585
GPBP1L1 GC-rich promoter binding protein 1-like 1 -0.0238566
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -0.0238423
LOXL2 lysyl oxidase-like 2 -0.0237976
RBM39 RNA binding motif protein 39 -0.0236882
MAP4 microtubule-associated protein 4 -0.0235991
JMJD1C jumonji domain containing 1C -0.0234647
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0228103
RLF rearranged L-myc fusion -0.0227808
OGA O-GlcNAcase -0.0227676
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0227242
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0226526