Busulfan_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Busulfan perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Busulfan_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.237055
FTH1 ferritin, heavy polypeptide 1 0.101655
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0836565
MCL1 myeloid cell leukemia 1 0.0726058
DOCK4 dedicator of cytokinesis 4 0.0713272
IGFBP3 insulin-like growth factor binding protein 3 0.0703891
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0671052
SOD2 superoxide dismutase 2, mitochondrial 0.0593763
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0578419
BIRC3 baculoviral IAP repeat containing 3 0.057464
WWOX WW domain containing oxidoreductase 0.054708
FNDC3B fibronectin type III domain containing 3B 0.0544891
ARHGAP26 Rho GTPase activating protein 26 0.047984
GRAMD1B GRAM domain containing 1B 0.0478469
ATXN1 ataxin 1 0.0468898
DST dystonin 0.0445186
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0431173
ZSWIM6 zinc finger, SWIM-type containing 6 0.0409661
SAMD4A sterile alpha motif domain containing 4A 0.037928
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0374774
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0370584
KTN1 kinectin 1 (kinesin receptor) 0.0359127
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0357313
IL6 interleukin 6 0.0340962
FAM107B family with sequence similarity 107, member B 0.0321792
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0310554
BMP6 bone morphogenetic protein 6 0.0310293
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0301499
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0300576
PDIA3 protein disulfide isomerase family A, member 3 0.0296614
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0288638
LAMC2 laminin, gamma 2 0.0282932
ELL2 elongation factor, RNA polymerase II, 2 0.0276541
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0266621
TPM3 tropomyosin 3 0.0265008
ALCAM activated leukocyte cell adhesion molecule 0.0261742
KIAA0319 KIAA0319 0.0257564
SLC35F3 solute carrier family 35, member F3 0.0254131
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0248873
CDCP1 CUB domain containing protein 1 0.0247466
GOLGB1 golgin B1 0.0247075
PM20D1 peptidase M20 domain containing 1 0.0245453
MYO1E myosin IE 0.0243225
EPAS1 endothelial PAS domain protein 1 0.0240903
POTEF POTE ankyrin domain family, member F 0.0239912
PDE10A phosphodiesterase 10A 0.0239145
PRKCE protein kinase C, epsilon 0.0236248
ANGPTL4 angiopoietin-like 4 0.0232056
SMYD3 SET and MYND domain containing 3 0.023192
RSPO3 R-spondin 3 0.0230966
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0229029
PYGL phosphorylase, glycogen, liver 0.022865
GLS2 glutaminase 2 (liver, mitochondrial) 0.0226229
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0225467
APLP2 amyloid beta (A4) precursor-like protein 2 0.0222976
CXCL8 chemokine (C-X-C motif) ligand 8 0.0222154
LDHA lactate dehydrogenase A 0.0218928
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0218623
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0218472
DOCK5 dedicator of cytokinesis 5 0.0218108
RPS2 ribosomal protein S2 0.0216996
TPM4 tropomyosin 4 0.0214292
CCPG1 cell cycle progression 1 0.0214145
FHIT fragile histidine triad 0.0213554
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0212291
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0211027
TPM1 tropomyosin 1 (alpha) 0.0210041
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0209218
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.02081
PRELID2 PRELI domain containing 2 0.0207637
MACF1 microtubule-actin crosslinking factor 1 0.02054
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0203316
PDLIM5 PDZ and LIM domain 5 0.020274
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0201719
SMOC1 SPARC related modular calcium binding 1 0.0197834
ERRFI1 ERBB receptor feedback inhibitor 1 0.0195732
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.019275
ITGAV integrin, alpha V 0.0192541
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0191255
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0189324
LGALS1 lectin, galactoside-binding, soluble, 1 0.018812
CEMIP2 cell migration inducing hyaluronidase 2 0.0186415
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0186143
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.018609
PRKD1 protein kinase D1 0.0183181
STC1 stanniocalcin 1 0.0181529
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0180575
SYAP1 synapse associated protein 1 0.0177681
NEBL nebulette 0.017733
CALD1 caldesmon 1 0.0177305
MYOF myoferlin 0.017708
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0173884
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0172838
MAML3 mastermind-like 3 (Drosophila) 0.0172662
BTBD9 BTB (POZ) domain containing 9 0.0168366
CHD1L chromodomain helicase DNA binding protein 1-like 0.016687
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0165884
ATP11A ATPase, class VI, type 11A 0.0164281
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.016222
PTPRM protein tyrosine phosphatase, receptor type, M 0.0161671

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.16048
TXNRD1 thioredoxin reductase 1 -0.140929
PTMA prothymosin, alpha -0.0988543
HDAC9 histone deacetylase 9 -0.0823841
IGF2 insulin-like growth factor 2 -0.0811279
FTL ferritin, light polypeptide -0.0795104
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0719433
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0701079
SLC38A2 solute carrier family 38, member 2 -0.0673167
RBM39 RNA binding motif protein 39 -0.0646954
WDR43 WD repeat domain 43 -0.0611106
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0608235
RPS21 ribosomal protein S21 -0.0573581
RPL23 ribosomal protein L23 -0.054953
MT2A metallothionein 2A -0.053488
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0510578
TM4SF1 transmembrane 4 L six family member 1 -0.0497362
EIF1 eukaryotic translation initiation factor 1 -0.0490767
ANKRD11 ankyrin repeat domain 11 -0.0479882
RAD21 RAD21 homolog (S. pombe) -0.0474975
ERBIN erbb2 interacting protein -0.0460018
CAVIN1 caveolae associated protein 1 -0.0454492
ECT2 epithelial cell transforming 2 -0.0453047
LMNA lamin A/C -0.0421401
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0420797
KDM3A lysine (K)-specific demethylase 3A -0.041804
YBX3 Y box binding protein 3 -0.0414086
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0410791
MARCHF6 membrane associated ring-CH-type finger 6 -0.04099
TPT1 tumor protein, translationally-controlled 1 -0.0409842
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0403016
ZFAND3 zinc finger, AN1-type domain 3 -0.0392215
CYRIB CYFIP related Rac1 interactor B -0.0381802
RPL19 ribosomal protein L19 -0.0372681
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0370298
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0365218
PUM1 pumilio RNA-binding family member 1 -0.0357155
RPL31 ribosomal protein L31 -0.0354891
RBM25 RNA binding motif protein 25 -0.0343391
RHEB Ras homolog enriched in brain -0.0340393
PAWR PRKC, apoptosis, WT1, regulator -0.0331548
ACTG1 actin gamma 1 -0.0328657
BHLHE40 basic helix-loop-helix family, member e40 -0.0323591
EWSR1 EWS RNA-binding protein 1 -0.0323411
IER3 immediate early response 3 -0.0322037
PTK2 protein tyrosine kinase 2 -0.0320393
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0317315
ZNF207 zinc finger protein 207 -0.0313894
RPL4 ribosomal protein L4 -0.031311
RSL1D1 ribosomal L1 domain containing 1 -0.031058
RPL35A ribosomal protein L35a -0.0307887
USP3 ubiquitin specific peptidase 3 -0.0305964
PFDN2 prefoldin subunit 2 -0.0305118
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0303635
ACACA acetyl-CoA carboxylase alpha -0.0293895
RPS27A ribosomal protein S27a -0.0291223
ANKRD28 ankyrin repeat domain 28 -0.0291217
SETD5 SET domain containing 5 -0.0290445
SERF2 small EDRK-rich factor 2 -0.0288499
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0287265
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0284874
RHOA ras homolog family member A -0.028166
RPS29 ribosomal protein S29 -0.0279256
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0278559
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0276775
BICC1 BicC family RNA binding protein 1 -0.0275681
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0275316
RPS23 ribosomal protein S23 -0.0275305
NOL10 nucleolar protein 10 -0.0267374
SIK3 SIK family kinase 3 -0.0267362
APP amyloid beta (A4) precursor protein -0.0265664
IST1 increased sodium tolerance 1 homolog (yeast) -0.0264291
ATXN2L ataxin 2-like -0.0263721
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0261363
GARS1 glycyl-tRNA synthetase 1 -0.0260557
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0259969
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0259727
MBNL1 muscleblind-like splicing regulator 1 -0.025949
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0258463
MORF4L1 mortality factor 4 like 1 -0.025768
TNRC6B trinucleotide repeat containing 6B -0.0254522
SMAD2 SMAD family member 2 -0.0254137
FUS FUS RNA binding protein -0.0253932
ILF2 interleukin enhancer binding factor 2 -0.0251885
TFG TRK-fused gene -0.0251829
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0249045
NTN4 netrin 4 -0.0248345
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0247349
FBXO11 F-box protein 11 -0.0245709
NOP58 NOP58 ribonucleoprotein -0.0242938
NRG1 neuregulin 1 -0.0241816
KPNB1 karyopherin (importin) beta 1 -0.0241657
ASXL1 additional sex combs like transcriptional regulator 1 -0.0241466
RASAL2 RAS protein activator like 2 -0.0240133
UBAP2L ubiquitin associated protein 2-like -0.0239991
FDPS farnesyl diphosphate synthase -0.0239979
CDK12 cyclin-dependent kinase 12 -0.0239438
BABAM2 BRISC and BRCA1 A complex member 2 -0.0237942
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0237867
RPL36 ribosomal protein L36 -0.023776