Busulfan_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Busulfan perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Busulfan_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.110101
FN1 fibronectin 1 0.0929114
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0863291
NKD1 naked cuticle homolog 1 (Drosophila) 0.0834288
ZEB1 zinc finger E-box binding homeobox 1 0.0779601
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0672511
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0667184
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0640734
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0633804
CD44 CD44 molecule (Indian blood group) 0.0590419
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0585954
LIMCH1 LIM and calponin homology domains 1 0.0556907
FNDC3B fibronectin type III domain containing 3B 0.0519559
EGFR epidermal growth factor receptor 0.0511531
FMN1 formin 1 0.0493868
MACF1 microtubule-actin crosslinking factor 1 0.0493538
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0482754
EHBP1 EH domain binding protein 1 0.0480989
KIF5B kinesin family member 5B 0.0480156
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0476825
DIAPH2 diaphanous-related formin 2 0.0469856
COPB1 coatomer protein complex, subunit beta 1 0.0435478
HLA-B major histocompatibility complex, class I, B 0.0431705
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0431519
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0428771
SLIT2 slit homolog 2 (Drosophila) 0.042872
GLS2 glutaminase 2 (liver, mitochondrial) 0.0424871
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0423653
NAMPT nicotinamide phosphoribosyltransferase 0.0417931
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0414342
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0412335
CDH13 cadherin 13 0.0411066
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0407791
PALM2AKAP2 PALM2 and AKAP2 fusion 0.040707
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0406008
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0404851
B2M beta-2-microglobulin 0.0404375
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0403595
MCTP1 multiple C2 domains, transmembrane 1 0.0401702
ENO1 enolase 1, (alpha) 0.0399936
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0397189
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0393535
NLGN1 neuroligin 1 0.0392447
RAD51B RAD51 paralog B 0.0389607
PDE10A phosphodiesterase 10A 0.0385805
TRIO trio Rho guanine nucleotide exchange factor 0.0384716
CANX calnexin 0.0384461
AK1 adenylate kinase 1 0.0381862
HSPH1 heat shock 105kDa/110kDa protein 1 0.0380167
ATP13A3 ATPase type 13A3 0.0376411
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0373576
USP25 ubiquitin specific peptidase 25 0.0372531
TXNRD1 thioredoxin reductase 1 0.0365227
IGF2 insulin-like growth factor 2 0.0363837
EEF2 eukaryotic translation elongation factor 2 0.0360648
JMJD1C jumonji domain containing 1C 0.0359118
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0358395
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0356135
LIMS1 LIM and senescent cell antigen-like domains 1 0.0356134
ZNF638 zinc finger protein 638 0.0354014
FLNB filamin B, beta 0.0353659
RIGI RNA sensor RIG-I 0.034601
OSBPL8 oxysterol binding protein-like 8 0.0344091
PEAK1 pseudopodium-enriched atypical kinase 1 0.0343863
ZSWIM6 zinc finger, SWIM-type containing 6 0.0337603
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0334938
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0334073
HMGA2 high mobility group AT-hook 2 0.0330014
USP33 ubiquitin specific peptidase 33 0.0329231
RSAD2 radical S-adenosyl methionine domain containing 2 0.0327152
EFNA5 ephrin-A5 0.032694
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0320809
NRG3 neuregulin 3 0.032022
USP9X ubiquitin specific peptidase 9, X-linked 0.0318964
ZBTB20 zinc finger and BTB domain containing 20 0.0317229
TNS3 tensin 3 0.0314348
UBE3C ubiquitin protein ligase E3C 0.0313715
SCFD1 sec1 family domain containing 1 0.0308244
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0307907
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0302983
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0302427
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0299924
CEMIP2 cell migration inducing hyaluronidase 2 0.0296924
SDCBP syndecan binding protein (syntenin) 0.0295895
NAP1L1 nucleosome assembly protein 1-like 1 0.0293259
RLF rearranged L-myc fusion 0.0292223
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0292134
DST dystonin 0.0291562
TUSC3 tumor suppressor candidate 3 0.0287118
TBC1D5 TBC1 domain family, member 5 0.0286058
SERINC5 serine incorporator 5 0.0285379
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0283442
BBX bobby sox homolog (Drosophila) 0.0278449
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.027713
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0274306
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0274118
INHBA inhibin, beta A 0.0272668
CLIC4 chloride intracellular channel 4 0.0269955
PDLIM5 PDZ and LIM domain 5 0.0269811
ISG15 ISG15 ubiquitin-like modifier 0.0268968

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.157677
TMSB10 thymosin beta 10 -0.107432
SAMD4A sterile alpha motif domain containing 4A -0.104441
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0938074
ANXA2 annexin A2 -0.091779
MYO1E myosin IE -0.0901061
NDRG1 N-myc downstream regulated 1 -0.0822356
NCOA3 nuclear receptor coactivator 3 -0.0708043
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0681902
KRT17 keratin 17, type I -0.0620148
BACE2 beta-site APP-cleaving enzyme 2 -0.0614993
LAMC2 laminin, gamma 2 -0.0591085
S100A10 S100 calcium binding protein A10 -0.0587019
F3 coagulation factor III (thromboplastin, tissue factor) -0.0586142
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0574102
FTL ferritin, light polypeptide -0.0569882
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0568821
SVIL supervillin -0.0560977
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0538682
VMP1 vacuole membrane protein 1 -0.0525364
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0504377
RPL23 ribosomal protein L23 -0.0496206
ERRFI1 ERBB receptor feedback inhibitor 1 -0.04929
LOC112694756 uncharaterized LOC112694756 -0.0492287
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0485625
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0484391
ATOSA atos homolog A -0.0458682
HELZ helicase with zinc finger -0.0457262
MSI2 musashi RNA-binding protein 2 -0.045722
PKM pyruvate kinase, muscle -0.0454168
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0419107
AREG amphiregulin -0.0412398
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0411913
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0410046
USP53 ubiquitin specific peptidase 53 -0.0409096
TPR translocated promoter region, nuclear basket protein -0.0404322
FGFR2 fibroblast growth factor receptor 2 -0.0400241
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0396543
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0393512
LMO7 LIM domain 7 -0.0392461
NPC1 Niemann-Pick disease, type C1 -0.0390614
SRRM2 serine/arginine repetitive matrix 2 -0.0387288
IGF1R insulin-like growth factor 1 receptor -0.0382855
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0381952
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.037661
RPL35A ribosomal protein L35a -0.0376242
FBXL20 F-box and leucine-rich repeat protein 20 -0.0375603
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0372891
VIM vimentin -0.0372563
MYO6 myosin VI -0.0368562
PARD3 par-3 family cell polarity regulator -0.0362647
LAMB3 laminin, beta 3 -0.035497
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 -0.0353393
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0352359
RBM39 RNA binding motif protein 39 -0.0350177
GOLGA4 golgin A4 -0.0349465
FTH1 ferritin, heavy polypeptide 1 -0.034599
ARHGAP21 Rho GTPase activating protein 21 -0.0344056
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0343723
WASF2 WAS protein family, member 2 -0.0343076
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0342975
RAB1A RAB1A, member RAS oncogene family -0.0336968
BTG1 B-cell translocation gene 1, anti-proliferative -0.0336615
RORA RAR-related orphan receptor A -0.0335512
CALU calumenin -0.0334277
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0334015
KLF6 Kruppel-like factor 6 -0.0333532
ACTG1 actin gamma 1 -0.0333502
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0332708
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0329577
DIAPH1 diaphanous-related formin 1 -0.0329002
TOP1 topoisomerase (DNA) I -0.0322854
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0316328
TSC22D2 TSC22 domain family, member 2 -0.0312315
WDR45B WD repeat domain 45B -0.0309956
JUP junction plakoglobin -0.0308313
ANXA1 annexin A1 -0.030801
ACBD3 acyl-CoA binding domain containing 3 -0.0302629
ANXA11 annexin A11 -0.029937
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase -0.029503
UFM1 ubiquitin-fold modifier 1 -0.0293472
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.028895
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.02888
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0288104
SNX9 sorting nexin 9 -0.0285018
CYTH1 cytohesin 1 -0.0284987
TMEM41B transmembrane protein 41B -0.028402
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0283584
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0283431
ARF1 ADP-ribosylation factor 1 -0.0282732
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0281764
AGFG1 ArfGAP with FG repeats 1 -0.0277115
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.027663
POTEF POTE ankyrin domain family, member F -0.0275567
RASA2 RAS p21 protein activator 2 -0.0274198
UBE2B ubiquitin-conjugating enzyme E2B -0.0270935
S100A6 S100 calcium binding protein A6 -0.0270529
CA12 carbonic anhydrase XII -0.027012
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0269857
MYOF myoferlin -0.0269294