Busulfan_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Busulfan perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Busulfan_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.169667
FTH1 ferritin, heavy polypeptide 1 0.104202
CXCL8 chemokine (C-X-C motif) ligand 8 0.0993697
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0953963
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0794154
EXT1 exostosin glycosyltransferase 1 0.0771634
MYH9 myosin, heavy chain 9, non-muscle 0.0724076
CD44 CD44 molecule (Indian blood group) 0.07116
ASPH aspartate beta-hydroxylase 0.0682534
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0651224
ZSWIM6 zinc finger, SWIM-type containing 6 0.0632485
TRIO trio Rho guanine nucleotide exchange factor 0.0522813
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0511598
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0509886
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.05048
MED13L mediator complex subunit 13-like 0.0489741
ZNF638 zinc finger protein 638 0.048402
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0469974
NAV1 neuron navigator 1 0.0457916
RYBP RING1 and YY1 binding protein 0.0457372
MEF2A myocyte enhancer factor 2A 0.0435261
SOD2 superoxide dismutase 2, mitochondrial 0.0425392
ZNF292 zinc finger protein 292 0.0418636
FBXL7 F-box and leucine-rich repeat protein 7 0.0411047
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0406276
ZNF395 zinc finger protein 395 0.040332
DST dystonin 0.0400278
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0397896
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0394115
PTK2 protein tyrosine kinase 2 0.0392962
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0390685
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0389477
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0381413
INSIG2 insulin induced gene 2 0.0375515
ENO1 enolase 1, (alpha) 0.0374223
NIPBL Nipped-B homolog (Drosophila) 0.0366488
IL6ST interleukin 6 signal transducer 0.0360177
UBA6 ubiquitin-like modifier activating enzyme 6 0.0358933
FNDC3B fibronectin type III domain containing 3B 0.0351874
NDRG1 N-myc downstream regulated 1 0.0349896
RAD51B RAD51 paralog B 0.0349289
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0337557
SBF2 SET binding factor 2 0.0335525
YAP1 Yes-associated protein 1 0.0331255
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0329778
ECE1 endothelin converting enzyme 1 0.0329551
CUX1 cut-like homeobox 1 0.032905
SMYD3 SET and MYND domain containing 3 0.0322677
KYNU kynureninase 0.0322027
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.031839
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0317989
QKI QKI, KH domain containing, RNA binding 0.0311924
GLIS3 GLIS family zinc finger 3 0.0311056
FAM13A family with sequence similarity 13, member A 0.0309185
FAM120A family with sequence similarity 120A 0.0308505
TTC3 tetratricopeptide repeat domain 3 0.0308419
SYNJ2 synaptojanin 2 0.0307376
CANX calnexin 0.0306434
ARHGAP35 Rho GTPase activating protein 35 0.0304434
CENPF centromere protein F, 350/400kDa 0.0303435
POTEF POTE ankyrin domain family, member F 0.0303307
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0301393
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0301379
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0301242
VEGFA vascular endothelial growth factor A 0.0299429
NRXN3 neurexin 3 0.0299261
CYLD cylindromatosis (turban tumor syndrome) 0.0299111
ZNF148 zinc finger protein 148 0.0296953
PRKCA protein kinase C, alpha 0.0292942
CLIC4 chloride intracellular channel 4 0.0290432
INTS6 integrator complex subunit 6 0.0286725
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0284873
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.028383
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0283276
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0282809
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0281883
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0277385
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0276529
PKM pyruvate kinase, muscle 0.0276491
GPBP1 GC-rich promoter binding protein 1 0.0276459
BRD2 bromodomain containing 2 0.0273716
ARB2A ARB2 cotranscriptional regulator A 0.0272968
FUS FUS RNA binding protein 0.0272873
BHLHE40 basic helix-loop-helix family, member e40 0.0271265
PRELID2 PRELI domain containing 2 0.0264926
NCAPG2 non-SMC condensin II complex, subunit G2 0.026346
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0261395
FMNL2 formin-like 2 0.0258822
DPYSL2 dihydropyrimidinase-like 2 0.025685
SQSTM1 sequestosome 1 0.0255155
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0255062
PACS1 phosphofurin acidic cluster sorting protein 1 0.0255012
CHD8 chromodomain helicase DNA binding protein 8 0.0254096
ANKRD37 ankyrin repeat domain 37 0.0253883
IL7R interleukin 7 receptor 0.025321
RUNX1 runt-related transcription factor 1 0.0252882
MORF4L1 mortality factor 4 like 1 0.0252771
SSBP2 single-stranded DNA binding protein 2 0.0249495
ANKHD1 ankyrin repeat and KH domain containing 1 0.0249492
MKI67 marker of proliferation Ki-67 0.024805

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.188992
COL6A3 collagen, type VI, alpha 3 -0.183487
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.147685
HLA-B major histocompatibility complex, class I, B -0.111098
MT2A metallothionein 2A -0.0980363
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0852906
TGFBI transforming growth factor, beta-induced, 68kDa -0.0793897
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.072524
IGFBP7 insulin-like growth factor binding protein 7 -0.0724033
AKAP12 A kinase (PRKA) anchor protein 12 -0.0709482
VIM vimentin -0.0686619
VCL vinculin -0.0643995
LOXL2 lysyl oxidase-like 2 -0.0621663
MT1X metallothionein 1X -0.0605997
COL1A2 collagen, type I, alpha 2 -0.0591937
STC1 stanniocalcin 1 -0.0548455
GARS1 glycyl-tRNA synthetase 1 -0.0547229
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0519591
TPT1 tumor protein, translationally-controlled 1 -0.046634
COL6A2 collagen, type VI, alpha 2 -0.0458155
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0452535
FSCN1 fascin actin-bundling protein 1 -0.0423226
PRSS23 protease, serine, 23 -0.0418477
COL7A1 collagen, type VII, alpha 1 -0.0398654
HLA-C major histocompatibility complex, class I, C -0.0398202
RRBP1 ribosome binding protein 1 -0.0392525
GOLGA4 golgin A4 -0.0376925
PTPRF protein tyrosine phosphatase, receptor type, F -0.0371244
MON2 MON2 homolog (S. cerevisiae) -0.036468
COL6A1 collagen, type VI, alpha 1 -0.0363863
SRPK2 SRSF protein kinase 2 -0.0362277
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0361565
PRRC2C proline-rich coiled-coil 2C -0.0359813
PLAUR plasminogen activator, urokinase receptor -0.0351133
FN1 fibronectin 1 -0.0340233
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0332589
RPL35A ribosomal protein L35a -0.0330214
NKD1 naked cuticle homolog 1 (Drosophila) -0.0328394
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0326023
CLTC clathrin, heavy chain (Hc) -0.031744
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0317016
RPL34 ribosomal protein L34 -0.031368
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0312404
TXNIP thioredoxin interacting protein -0.0312366
H3-3B H3.3 histone B -0.0311999
TMEM165 transmembrane protein 165 -0.0308826
SDC4 syndecan 4 -0.0307237
MAPK8 mitogen-activated protein kinase 8 -0.0307054
TNNC1 troponin C type 1 (slow) -0.0297713
CADM1 cell adhesion molecule 1 -0.0295856
TM4SF1 transmembrane 4 L six family member 1 -0.0289465
SEC31A SEC31 homolog A (S. cerevisiae) -0.0288111
NKTR natural killer cell triggering receptor -0.0287723
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0287608
CDK13 cyclin-dependent kinase 13 -0.0283136
ACTN4 actinin, alpha 4 -0.0282733
C1D C1D nuclear receptor corepressor -0.0281576
OGA O-GlcNAcase -0.0279084
LUC7L LUC7-like (S. cerevisiae) -0.0275691
FKBP10 FK506 binding protein 10, 65 kDa -0.0272728
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0271723
ZMYND8 zinc finger, MYND-type containing 8 -0.027123
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0270527
ANKRD28 ankyrin repeat domain 28 -0.0265222
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0264931
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.0263896
SCFD2 sec1 family domain containing 2 -0.02634
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0262771
MBD5 methyl-CpG binding domain protein 5 -0.0261341
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0260141
DDB1 damage-specific DNA binding protein 1, 127kDa -0.0257631
CLINT1 clathrin interactor 1 -0.0256768
RPS19 ribosomal protein S19 -0.025656
SAR1A secretion associated, Ras related GTPase 1A -0.0256497
PMM2 phosphomannomutase 2 -0.0254777
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0254034
SRSF11 serine/arginine-rich splicing factor 11 -0.0252748
UBE2H ubiquitin-conjugating enzyme E2H -0.0251878
SERF2 small EDRK-rich factor 2 -0.0250558
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0248544
TPM4 tropomyosin 4 -0.0247793
CFDP1 craniofacial development protein 1 -0.0247739
WWTR1 WW domain containing transcription regulator 1 -0.0246809
AHCTF1 AT hook containing transcription factor 1 -0.024105
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -0.0240714
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0240672
KAZN kazrin, periplakin interacting protein -0.0239855
CAVIN1 caveolae associated protein 1 -0.0239071
HEATR5B HEAT repeat containing 5B -0.0238249
RPS21 ribosomal protein S21 -0.0237945
WIPF2 WAS/WASL interacting protein family, member 2 -0.0233091
AOPEP aminopeptidase O (putative) -0.0230741
CTSB cathepsin B -0.0229603
AHNAK AHNAK nucleoprotein -0.022881
WSB1 WD repeat and SOCS box containing 1 -0.0227623
MAP4 microtubule-associated protein 4 -0.0226222
CIRSR corepressor of RBPJ and splicing regulator -0.0225239
SNX6 sorting nexin 6 -0.0224925
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0223528
SMC5 structural maintenance of chromosomes 5 -0.022349