CAL-33 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human tongue squamous cell carcinoma established from the surgically removed fragment of a tongue lesion from a 69-year-old man with moderately differentiated squamous cell carcinoma of the tongue in 1983 (prior to therapy). (BRENDA Tissue and Enzyme Source Ontology, BTO_0000941)
Similar Terms
Downloads & Tools

Genes

32 genes with high or low copy number in CAL-33 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value

low copy number

Symbol Name Standardized Value
ARSD arylsulfatase D -3.49112
ARSE arylsulfatase E (chondrodysplasia punctata 1) -3.49112
GYG2 glycogenin 2 -3.49112
XG Xg blood group -3.49112
FAM9A family with sequence similarity 9, member A -2.9644
FAM9B family with sequence similarity 9, member B -2.9644
ANOS1 anosmin 1 -2.9644
VCX3B variable charge, X-linked 3B -2.93416
LOC389906 zinc finger protein 839 pseudogene -2.91268
MIR4770 microRNA 4770 -2.91268
CLCN4 chloride channel, voltage-sensitive 4 -2.91268
WWC3 WWC family member 3 -2.91268
LOC100288814 -2.91268
ARSF arylsulfatase F -2.88947
VCX3A variable charge, X-linked 3A -2.88947
MXRA5 matrix-remodelling associated 5 -2.88947
NLGN4X neuroligin 4, X-linked -2.88947
LINC01546 long intergenic non-protein coding RNA 1546 -2.88947
PRKX protein kinase, X-linked -2.88947
ARSH arylsulfatase family, member H -2.88947
SHROOM2 shroom family member 2 -2.87802
TBL1X transducin (beta)-like 1X-linked -2.87802
GPR143 G protein-coupled receptor 143 -2.87269
VCX2 variable charge, X-linked 2 -2.87269
MIR651 microRNA 651 -2.86624
PNPLA4 patatin-like phospholipase domain containing 4 -2.85607
VCX variable charge, X-linked -2.85607
MID1 midline 1 -2.84999
MIR4767 microRNA 4767 -2.82043
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1 -2.80688
LOC649352 ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like -2.80262
STS steroid sulfatase (microsomal), isozyme S -2.7778