CAL-39 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Other Solid Cancers Tumour (Cell Model Passports, SIDM00935)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00935
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Genes

195 proteins associated with the cell line CAL-39 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ACSL3 acyl-CoA synthetase long-chain family member 3
ADAM10 ADAM metallopeptidase domain 10
ADAM17 ADAM metallopeptidase domain 17
ALPP alkaline phosphatase, placental
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
AMOT angiomotin
ANKHD1 ankyrin repeat and KH domain containing 1
ASB7 ankyrin repeat and SOCS box containing 7
ASPH aspartate beta-hydroxylase
BICD2 bicaudal D homolog 2 (Drosophila)
C3 complement component 3
CDK9 cyclin-dependent kinase 9
CDNF cerebral dopamine neurotrophic factor
CES1 carboxylesterase 1
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
DERL1 derlin 1
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8
DYNLL1 dynein, light chain, LC8-type 1
ESRRA estrogen-related receptor alpha
FKBP2 FK506 binding protein 2, 13kDa
G6PD glucose-6-phosphate dehydrogenase
GLA galactosidase, alpha
GOLGA2 golgin A2
GPC1 glypican 1
GVINP1 GTPase, very large interferon inducible pseudogene 1
HMCES 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HNRNPL heterogeneous nuclear ribonucleoprotein L
HOXD3 homeobox D3
IGFBP3 insulin-like growth factor binding protein 3
INTS7 integrator complex subunit 7
IRS4 insulin receptor substrate 4
ITCH itchy E3 ubiquitin protein ligase
JAM3 junctional adhesion molecule 3
KCTD1 potassium channel tetramerization domain containing 1
KRT13 keratin 13, type I
KRT78 keratin 78, type II
LEMD3 LEM domain containing 3
LRWD1 leucine-rich repeats and WD repeat domain containing 1
MANBAL mannosidase, beta A, lysosomal-like
MMGT1 membrane magnesium transporter 1
MRPS10 mitochondrial ribosomal protein S10
MTRF1 mitochondrial translational release factor 1
MYO1B myosin IB
MYT1L myelin transcription factor 1-like
NUMA1 nuclear mitotic apparatus protein 1
NUP85 nucleoporin 85kDa
ORC1 origin recognition complex, subunit 1
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1
PCBP3 poly(rC) binding protein 3
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
POLRMT polymerase (RNA) mitochondrial (DNA directed)
PPP4R2 protein phosphatase 4, regulatory subunit 2
PRPF38B pre-mRNA processing factor 38B
PSCA prostate stem cell antigen
PTBP1 polypyrimidine tract binding protein 1
PTPN6 protein tyrosine phosphatase, non-receptor type 6
RAB14 RAB14, member RAS oncogene family
RAB1B RAB1B, member RAS oncogene family
RAB35 RAB35, member RAS oncogene family
RAP2B RAP2B, member of RAS oncogene family
RBM4 RNA binding motif protein 4
RCC1 regulator of chromosome condensation 1
RPP38 ribonuclease P/MRP 38kDa subunit
SCCPDH saccharopine dehydrogenase (putative)
SCPEP1 serine carboxypeptidase 1
SF3A2 splicing factor 3a, subunit 2, 66kDa
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SLC6A16 solute carrier family 6, member 16
SMG6 SMG6 nonsense mediated mRNA decay factor
SMIM20 small integral membrane protein 20
SPATA5L1 spermatogenesis associated 5-like 1
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
SUN5 Sad1 and UNC84 domain containing 5
TACSTD2 tumor-associated calcium signal transducer 2
TBCE tubulin folding cofactor E
TJP1 tight junction protein 1
TMEM165 transmembrane protein 165
TMEM41B transmembrane protein 41B
TMLHE trimethyllysine hydroxylase, epsilon
TMTC3 transmembrane and tetratricopeptide repeat containing 3
TNFAIP2 tumor necrosis factor, alpha-induced protein 2
TRAM1 translocation associated membrane protein 1
TSC22D3 TSC22 domain family, member 3
TXLNG taxilin gamma
UBAC2 UBA domain containing 2
UBE4A ubiquitination factor E4A
UFSP2 UFM1-specific peptidase 2
UNC93B1 unc-93 homolog B1 (C. elegans)
VAMP5 vesicle-associated membrane protein 5
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing
ZFPL1 zinc finger protein-like 1
ZNF148 zinc finger protein 148

Symbol Name
ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit
ARHGAP17 Rho GTPase activating protein 17
BAG4 BCL2-associated athanogene 4
CCDC126 coiled-coil domain containing 126
CCDC127 coiled-coil domain containing 127
CCDC73 coiled-coil domain containing 73
CD2BP2 CD2 (cytoplasmic tail) binding protein 2
CHD2 chromodomain helicase DNA binding protein 2
CNOT1 CCR4-NOT transcription complex, subunit 1
COA7 cytochrome c oxidase assembly factor 7 (putative)
COG3 component of oligomeric golgi complex 3
COPE coatomer protein complex, subunit epsilon
CYCS cytochrome c, somatic
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DLGAP5 discs, large (Drosophila) homolog-associated protein 5
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7
DNM1L dynamin 1-like
DNM2 dynamin 2
ERI1 exoribonuclease 1
EXOC6B exocyst complex component 6B
FKBP14 FK506 binding protein 14, 22 kDa
FXN frataxin
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
GINS4 GINS complex subunit 4 (Sld5 homolog)
GOLGA3 golgin A3
GPX1 glutathione peroxidase 1
GPX4 glutathione peroxidase 4
GTF2B general transcription factor IIB
HAX1 HCLS1 associated protein X-1
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
HSDL1 hydroxysteroid dehydrogenase like 1
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
IFI35 interferon-induced protein 35
KIAA0319L KIAA0319-like
LINC00919 long intergenic non-protein coding RNA 919
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LUC7L3 LUC7-like 3 (S. cerevisiae)
MED19 mediator complex subunit 19
MLXIPL MLX interacting protein-like
MMP27 matrix metallopeptidase 27
MRI1 methylthioribose-1-phosphate isomerase 1
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit
NACA2 nascent polypeptide-associated complex alpha subunit 2
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NBAS neuroblastoma amplified sequence
NDE1 nudE neurodevelopment protein 1
NDUFC2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
OXSM 3-oxoacyl-ACP synthase, mitochondrial
PATL1 protein associated with topoisomerase II homolog 1 (yeast)
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha
PELO pelota homolog (Drosophila)
PEX3 peroxisomal biogenesis factor 3
PFDN6 prefoldin subunit 6
PLAA phospholipase A2-activating protein
POLD2 polymerase (DNA directed), delta 2, accessory subunit
POU2F1 POU class 2 homeobox 1
PPIL4 peptidylprolyl isomerase (cyclophilin)-like 4
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PRADC1 protease-associated domain containing 1
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
PSMG1 proteasome (prosome, macropain) assembly chaperone 1
PTGR2 prostaglandin reductase 2
RBM12 RNA binding motif protein 12
RHOXF1 Rhox homeobox family, member 1
RPP25L ribonuclease P/MRP 25kDa subunit-like
SAP30BP SAP30 binding protein
SBDS Shwachman-Bodian-Diamond syndrome
SEC23B Sec23 homolog B (S. cerevisiae)
SH3GLB1 SH3-domain GRB2-like endophilin B1
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3
SLC22A18 solute carrier family 22, member 18
SNX6 sorting nexin 6
SUOX sulfite oxidase
THNSL1 threonine synthase-like 1 (S. cerevisiae)
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast)
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
TTC4 tetratricopeptide repeat domain 4
TXNDC17 thioredoxin domain containing 17
TXNL1 thioredoxin-like 1
UBA1 ubiquitin-like modifier activating enzyme 1
UBXN1 UBX domain protein 1
UNC45A unc-45 homolog A (C. elegans)
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae)
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
WIPF2 WAS/WASL interacting protein family, member 2
WRAP73 WD repeat containing, antisense to TP73
XTBD1 XRN2 binding domain containing 1