CAL-54 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

226 genes with high or low expression in CAL-54 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
SLC22A2 solute carrier family 22 (organic cation transporter), member 2 3.60177
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1 3.56541
LACTB2 lactamase, beta 2 3.20769
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase 2.8409
NPEPPS aminopeptidase puromycin sensitive 2.80432
UGT2A3 UDP glucuronosyltransferase 2 family, polypeptide A3 2.62596
TP53BP2 tumor protein p53 binding protein 2 2.57095
FXYD2 FXYD domain containing ion transport regulator 2 2.36066
STAT1 signal transducer and activator of transcription 1, 91kDa 2.30738
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 2.23655
NUPL2 nucleoporin like 2 2.23515
GCC2 GRIP and coiled-coil domain containing 2 2.23033
KCNJ16 potassium channel, inwardly rectifying subfamily J, member 16 2.22475
THSD4 thrombospondin, type I, domain containing 4 2.20771
TGOLN2 trans-golgi network protein 2 2.18181
STAT4 signal transducer and activator of transcription 4 2.17645
MALT1 MALT1 paracaspase 2.13458
HAVCR1 hepatitis A virus cellular receptor 1 2.12674
HLF hepatic leukemia factor 2.12344
DNAJC13 DnaJ (Hsp40) homolog, subfamily C, member 13 2.11994
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 2.08356
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 2.07062
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 2.06893
SLC17A1 solute carrier family 17 (organic anion transporter), member 1 2.04491
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 2.03605
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 2.02817
SALL1 spalt-like transcription factor 1 2.01023
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28 2.00179
ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 1.99983
UGCG UDP-glucose ceramide glucosyltransferase 1.99027
CLEC4E C-type lectin domain family 4, member E 1.97558
AMACR alpha-methylacyl-CoA racemase 1.9503
ATP10D ATPase, class V, type 10D 1.9363
PILRB paired immunoglobin-like type 2 receptor beta 1.92262
HABP2 hyaluronan binding protein 2 1.9206
SKAP2 src kinase associated phosphoprotein 2 1.91528
ITGAV integrin, alpha V 1.90763
BTG1 B-cell translocation gene 1, anti-proliferative 1.8924
TSPAN12 tetraspanin 12 1.89212
COBLL1 cordon-bleu WH2 repeat protein-like 1 1.8829
ANXA4 annexin A4 1.86532
DZIP3 DAZ interacting zinc finger protein 3 1.85522
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 1.85219
HOXA5 homeobox A5 1.85204
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 1.85045
MMP7 matrix metallopeptidase 7 1.8444
BICC1 BicC family RNA binding protein 1 1.84212
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 1.79279
CRYM crystallin, mu 1.79128
HOXA4 homeobox A4 1.78735
KIAA1033 KIAA1033 1.77991
PCSK5 proprotein convertase subtilisin/kexin type 5 1.77367
HNF1B HNF1 homeobox B 1.77178
RAD51D RAD51 paralog D 1.76321
HOXA9 homeobox A9 1.75264
PDZK1 PDZ domain containing 1 1.73901
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 1.73651
KIAA0895 KIAA0895 1.7338
KCNJ13 potassium channel, inwardly rectifying subfamily J, member 13 1.73023
VCAN versican 1.71332
SPTBN1 spectrin, beta, non-erythrocytic 1 1.69412
SPAG16 sperm associated antigen 16 1.67721
COMMD8 COMM domain containing 8 1.66457
PKDREJ polycystin (PKD) family receptor for egg jelly 1.66109
KL klotho 1.65261
CDH16 cadherin 16, KSP-cadherin 1.63631
TOM1L1 target of myb1 (chicken)-like 1 1.6308
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 1.62764
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 1.62163
GLS glutaminase 1.61791
VCAM1 vascular cell adhesion molecule 1 1.6131
CXCL5 chemokine (C-X-C motif) ligand 5 1.6105
PDZK1IP1 PDZK1 interacting protein 1 1.59762
BDH2 3-hydroxybutyrate dehydrogenase, type 2 1.59413
TMEM255A transmembrane protein 255A 1.5828
RNF170 ring finger protein 170 1.58056
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 1.57674
CA2 carbonic anhydrase II 1.56295
GATAD1 GATA zinc finger domain containing 1 1.56226
PTPN3 protein tyrosine phosphatase, non-receptor type 3 1.55663
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 1.55385
RGS20 regulator of G-protein signaling 20 1.55304
SST somatostatin 1.55109
UXS1 UDP-glucuronate decarboxylase 1 1.54942
BHMT2 betaine--homocysteine S-methyltransferase 2 1.54671
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 1.54365
CYTL1 cytokine-like 1 1.53927
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A 1.53877
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) 1.53507
IFT38 intraflagellar transport 38 1.52921
HIPK2 homeodomain interacting protein kinase 2 1.52245
B9D1 B9 protein domain 1 1.51657
MRS2 MRS2 magnesium transporter 1.51651
BLVRA biliverdin reductase A 1.51395
RHOT1 ras homolog family member T1 1.51181
MAPKAPK3 mitogen-activated protein kinase-activated protein kinase 3 1.50774
CRYZ crystallin, zeta (quinone reductase) 1.50595
NR2C1 nuclear receptor subfamily 2, group C, member 1 1.49569
ARL4C ADP-ribosylation factor-like 4C 1.49081
RNF185 ring finger protein 185 1.48465
SPP1 secreted phosphoprotein 1 1.48109
CLDND1 claudin domain containing 1 1.47584
BIRC3 baculoviral IAP repeat containing 3 1.47234
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle) 1.46903
DLG1 discs, large homolog 1 (Drosophila) 1.46795
STX2 syntaxin 2 1.45776
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14 1.4577
PRODH2 proline dehydrogenase (oxidase) 2 1.4567
SEPT2 septin 2 1.43982
TEX13B testis expressed 13B 1.43648
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 1.42246
SNX10 sorting nexin 10 1.41775

low expression

Symbol Name Standardized Value
MAP6D1 MAP6 domain containing 1 -2.68998
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 -2.58787
CAPN15 calpain 15 -2.56033
MADD MAP-kinase activating death domain -2.53177
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase -2.50114
CCDC85B coiled-coil domain containing 85B -2.42756
ALDOC aldolase C, fructose-bisphosphate -2.42283
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit -2.35266
GTF2A1 general transcription factor IIA, 1, 19/37kDa -2.30741
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -2.29075
FOXN2 forkhead box N2 -2.26595
ZNF574 zinc finger protein 574 -2.1604
SUV39H1 suppressor of variegation 3-9 homolog 1 (Drosophila) -2.06757
ASCC2 activating signal cointegrator 1 complex subunit 2 -2.05451
NRD1 nardilysin (N-arginine dibasic convertase) -2.00225
NCAPH2 non-SMC condensin II complex, subunit H2 -1.99624
PMP2 peripheral myelin protein 2 -1.96773
PANK4 pantothenate kinase 4 -1.96115
CEMIP cell migration inducing protein, hyaluronan binding -1.94569
SOX15 SRY (sex determining region Y)-box 15 -1.92648
HAX1 HCLS1 associated protein X-1 -1.92341
JUNB jun B proto-oncogene -1.92269
MPC1 mitochondrial pyruvate carrier 1 -1.89086
HCAR3 hydroxycarboxylic acid receptor 3 -1.88943
NDUFA7 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa -1.86826
RBM10 RNA binding motif protein 10 -1.86719
GRK6 G protein-coupled receptor kinase 6 -1.86624
PCDH17 protocadherin 17 -1.85587
AKT2 v-akt murine thymoma viral oncogene homolog 2 -1.83336
HAUS7 HAUS augmin-like complex, subunit 7 -1.83301
ZNF609 zinc finger protein 609 -1.82578
DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 -1.82558
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa -1.81758
FBP1 fructose-1,6-bisphosphatase 1 -1.80348
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma -1.79885
DCXR dicarbonyl/L-xylulose reductase -1.79667
GMEB1 glucocorticoid modulatory element binding protein 1 -1.78206
RNF113A ring finger protein 113A -1.77994
DPYSL4 dihydropyrimidinase-like 4 -1.77353
NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit -1.76409
STRN4 striatin, calmodulin binding protein 4 -1.7606
PWP2 PWP2 periodic tryptophan protein homolog (yeast) -1.75253
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme -1.74189
RNF123 ring finger protein 123 -1.73134
ABI3BP ABI family, member 3 (NESH) binding protein -1.72774
UBIAD1 UbiA prenyltransferase domain containing 1 -1.72724
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1 -1.72596
SCG5 secretogranin V -1.67589
SERGEF secretion regulating guanine nucleotide exchange factor -1.67303
AGTR1 angiotensin II receptor, type 1 -1.67276
SART1 squamous cell carcinoma antigen recognized by T cells -1.67253
LAMA4 laminin, alpha 4 -1.66915
NRXN2 neurexin 2 -1.6689
LOC440895 two pore channel 3 pseudogene -1.66549
ADCY1 adenylate cyclase 1 (brain) -1.66469
CES1 carboxylesterase 1 -1.65782
PCDH12 protocadherin 12 -1.65657
AP1B1 adaptor-related protein complex 1, beta 1 subunit -1.65627
DGKZ diacylglycerol kinase, zeta -1.65013
CAND2 cullin-associated and neddylation-dissociated 2 (putative) -1.64967
CPSF3L cleavage and polyadenylation specific factor 3-like -1.64933
YY1AP1 YY1 associated protein 1 -1.63488
SUGP1 SURP and G patch domain containing 1 -1.61338
AFG3L2 AFG3-like AAA ATPase 2 -1.59543
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast) -1.58884
MYEF2 myelin expression factor 2 -1.58566
MED8 mediator complex subunit 8 -1.5815
DCPS decapping enzyme, scavenger -1.5807
FRAT2 frequently rearranged in advanced T-cell lymphomas 2 -1.57932
RNF2 ring finger protein 2 -1.57786
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) -1.57347
ADAM20 ADAM metallopeptidase domain 20 -1.57234
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6 -1.56968
LCP1 lymphocyte cytosolic protein 1 (L-plastin) -1.56885
GCDH glutaryl-CoA dehydrogenase -1.56409
FAIM2 Fas apoptotic inhibitory molecule 2 -1.55465
PLSCR4 phospholipid scramblase 4 -1.55065
RCC1 regulator of chromosome condensation 1 -1.54022
CSF2RB colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) -1.53825
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 -1.53618
CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 -1.52895
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1 -1.52885
SRPX2 sushi-repeat containing protein, X-linked 2 -1.52718
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 -1.52084
TBX2 T-box 2 -1.5205
SUMO3 small ubiquitin-like modifier 3 -1.51752
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) -1.51685
PAPD7 PAP associated domain containing 7 -1.51454
SLC30A4 solute carrier family 30 (zinc transporter), member 4 -1.51447
NOSIP nitric oxide synthase interacting protein -1.51235
FANCE Fanconi anemia, complementation group E -1.50904
TMEM87A transmembrane protein 87A -1.50584
EXOSC5 exosome component 5 -1.49941
SCAMP3 secretory carrier membrane protein 3 -1.49484
ADRBK1 adrenergic, beta, receptor kinase 1 -1.48721
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) -1.47503
GALC galactosylceramidase -1.4728
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed -1.47052
CST1 cystatin SN -1.46714
RARA retinoic acid receptor, alpha -1.46297
IGHMBP2 immunoglobulin mu binding protein 2 -1.46202
HYPK huntingtin interacting protein K -1.46151
NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) -1.45983
LARP1 La ribonucleoprotein domain family, member 1 -1.45484
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) -1.45443
COL4A6 collagen, type IV, alpha 6 -1.4496
MAML1 mastermind-like 1 (Drosophila) -1.44652
CD37 CD37 molecule -1.44003
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 -1.43101
AGXT alanine-glyoxylate aminotransferase -1.42763
COPE coatomer protein complex, subunit epsilon -1.42747
MAZ MYC-associated zinc finger protein (purine-binding transcription factor) -1.42742
FGF4 fibroblast growth factor 4 -1.41933
COX7B cytochrome c oxidase subunit VIIb -1.41845