CAL-62 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Thyroid Gland Carcinoma Tumour (Cell Model Passports, SIDM00931)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00931
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Genes

199 proteins associated with the cell line CAL-62 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AATF apoptosis antagonizing transcription factor
ABHD10 abhydrolase domain containing 10
ABT1 activator of basal transcription 1
ACAD9 acyl-CoA dehydrogenase family, member 9
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12
AHCTF1 AT hook containing transcription factor 1
AK3 adenylate kinase 3
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
C12ORF43 chromosome 12 open reading frame 43
CCDC59 coiled-coil domain containing 59
CCDC86 coiled-coil domain containing 86
CD59 CD59 molecule, complement regulatory protein
CDC5L cell division cycle 5-like
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
CMSS1 cms1 ribosomal small subunit homolog (yeast)
CTSH cathepsin H
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe)
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DEK DEK proto-oncogene
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
EXOSC5 exosome component 5
FOSL1 FOS-like antigen 1
GFM1 G elongation factor, mitochondrial 1
GLYCTK glycerate kinase
GRAMD1C GRAM domain containing 1C
HDDC3 HD domain containing 3
HMGA1 high mobility group AT-hook 1
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
IMMT inner membrane protein, mitochondrial
KHK ketohexokinase (fructokinase)
KPNA4 karyopherin alpha 4 (importin alpha 3)
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
LAS1L LAS1-like (S. cerevisiae)
LMNB2 lamin B2
MRPL9 mitochondrial ribosomal protein L9
MRPS12 mitochondrial ribosomal protein S12
MRPS16 mitochondrial ribosomal protein S16
MRPS22 mitochondrial ribosomal protein S22
MTO1 mitochondrial tRNA translation optimization 1
MYBBP1A MYB binding protein (P160) 1a
NAT10 N-acetyltransferase 10 (GCN5-related)
NCOA5 nuclear receptor coactivator 5
NEDE nephropathy, progressive, with deafness
NOL10 nucleolar protein 10
NOL7 nucleolar protein 7, 27kDa
NOP56 NOP56 ribonucleoprotein
NOP58 NOP58 ribonucleoprotein
NOP9 NOP9 nucleolar protein
NUP107 nucleoporin 107kDa
NUP133 nucleoporin 133kDa
NUP153 nucleoporin 153kDa
NUP188 nucleoporin 188kDa
NUP50 nucleoporin 50kDa
NUP93 nucleoporin 93kDa
OXA1L oxidase (cytochrome c) assembly 1-like
PAM16 presequence translocase-associated motor 16 homolog (S. cerevisiae)
PELP1 proline, glutamate and leucine rich protein 1
PES1 pescadillo ribosomal biogenesis factor 1
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific)
PMPCA peptidase (mitochondrial processing) alpha
PMPCB peptidase (mitochondrial processing) beta
PRPF19 pre-mRNA processing factor 19
PRR3 proline rich 3
PTPRA protein tyrosine phosphatase, receptor type, A
PUM3 pumilio RNA binding family member 3
RAE1 ribonucleic acid export 1
RBM14 RNA binding motif protein 14
RBM28 RNA binding motif protein 28
RRP8 ribosomal RNA processing 8, methyltransferase, homolog (yeast)
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
SERINC1 serine incorporator 1
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNX33 sorting nexin 33
SSNA1 Sjogren syndrome nuclear autoantigen 1
STAU1 staufen double-stranded RNA binding protein 1
STOML2 stomatin (EPB72)-like 2
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TCHH trichohyalin
TFAM transcription factor A, mitochondrial
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TOP1 topoisomerase (DNA) I
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae)
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TSLIG3A tRNA splicing ligase complex subunit 3A
U2SURP U2 snRNP-associated SURP domain containing
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
WDR18 WD repeat domain 18
WDR43 WD repeat domain 43
WDR74 WD repeat domain 74
XRN2 5'-3' exoribonuclease 2
YLPM1 YLP motif containing 1
YME1L1 YME1-like 1 ATPase
ZNF185 zinc finger protein 185 (LIM domain)
ZNF592 zinc finger protein 592

Symbol Name
ABI2 abl-interactor 2
AGRN agrin
ANKRD17 ankyrin repeat domain 17
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
BAG4 BCL2-associated athanogene 4
BASP1 brain abundant, membrane attached signal protein 1
BCAR1 breast cancer anti-estrogen resistance 1
CASP3 caspase 3, apoptosis-related cysteine peptidase
CASP7 caspase 7, apoptosis-related cysteine peptidase
CCDC91 coiled-coil domain containing 91
CDK4 cyclin-dependent kinase 4
CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7
CHMP4A charged multivesicular body protein 4A
CHMP7 charged multivesicular body protein 7
CKB creatine kinase, brain
CLASP2 cytoplasmic linker associated protein 2
COL18A1 collagen, type XVIII, alpha 1
COPG2 coatomer protein complex, subunit gamma 2
CORO7 coronin 7
CPQ carboxypeptidase Q
DAB2IP DAB2 interacting protein
DCAF7 DDB1 and CUL4 associated factor 7
DGKA diacylglycerol kinase, alpha 80kDa
DNM1P26 dynamin 1 pseudogene 26
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DTNA dystrobrevin, alpha
FAM166A family with sequence similarity 166, member A
FDPS farnesyl diphosphate synthase
FECH ferrochelatase
FRRS1 ferric-chelate reductase 1
FYCO1 FYVE and coiled-coil domain containing 1
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GGA1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GPR180 G protein-coupled receptor 180
GRIPAP1 GRIP1 associated protein 1
GSK3A glycogen synthase kinase 3 alpha
HDDC2 HD domain containing 2
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HSF1 heat shock transcription factor 1
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IDI1 isopentenyl-diphosphate delta isomerase 1
KIFC3 kinesin family member C3
LIN28B lin-28 homolog B (C. elegans)
LOC105371242 peptidyl-prolyl cis-trans isomerase A-like 4G
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene)
MAP3K7 mitogen-activated protein kinase kinase kinase 7
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MED8 mediator complex subunit 8
MEF2D myocyte enhancer factor 2D
METTL9 methyltransferase like 9
MICALL1 MICAL-like 1
MME membrane metallo-endopeptidase
MOV10 Mov10 RISC complex RNA helicase
MVB12A multivesicular body subunit 12A
NDUFA1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa
NGLY1 N-glycanase 1
NTF3 neurotrophin 3
NTM neurotrimin
NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
OSGEPL1 O-sialoglycoprotein endopeptidase-like 1
PARS2 prolyl-tRNA synthetase 2, mitochondrial (putative)
PCIF1 PDX1 C-terminal inhibiting factor 1
PCYOX1L prenylcysteine oxidase 1 like
PCYT1B phosphate cytidylyltransferase 1, choline, beta
PDRG1 p53 and DNA-damage regulated 1
PFKL phosphofructokinase, liver
PGS1 phosphatidylglycerophosphate synthase 1
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
POLE polymerase (DNA directed), epsilon, catalytic subunit
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP4R2 protein phosphatase 4, regulatory subunit 2
PSMB8 proteasome (prosome, macropain) subunit, beta type, 8
RAB2B RAB2B, member RAS oncogene family
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RBMS3 RNA binding motif, single stranded interacting protein 3
RHOB ras homolog family member B
RHOD ras homolog family member D
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5
SLC44A1 solute carrier family 44 (choline transporter), member 1
SNAPIN SNAP-associated protein
SOX2 SRY (sex determining region Y)-box 2
SOX6 SRY (sex determining region Y)-box 6
STK10 serine/threonine kinase 10
STMN3 stathmin-like 3
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
TBC1D24 TBC1 domain family, member 24
TDRD3 tudor domain containing 3
TMEM184C transmembrane protein 184C
TPMT thiopurine S-methyltransferase
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae)
TUBGCP6 tubulin, gamma complex associated protein 6
URM1 ubiquitin related modifier 1
UXT ubiquitously-expressed, prefoldin-like chaperone
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
WDR4 WD repeat domain 4
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble