CAL-85-1 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: adenocarcinoma, breast (Cell Line Ontology, CLO_0002190)
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Genes

622 genes with high or low copy number in CAL-85-1 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
OR4K14 olfactory receptor, family 4, subfamily K, member 14 2.93899
HBS1L HBS1-like translational GTPase 2.93899
OR11G2 olfactory receptor, family 11, subfamily G, member 2 2.93899
CIDEA cell death-inducing DFFA-like effector a 2.93899
MIR3662 microRNA 3662 2.93899
OR4K13 olfactory receptor, family 4, subfamily K, member 13 2.93899
ALDH8A1 aldehyde dehydrogenase 8 family, member A1 2.93899
OR4K15 olfactory receptor, family 4, subfamily K, member 15 2.93899
TUBB6 tubulin, beta 6 class V 2.76305
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 2.76305
RNASE10 ribonuclease, RNase A family, 10 (non-active) 2.76305
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 2.76305
EDDM3B epididymal protein 3B 2.76305
EDDM3A epididymal protein 3A 2.76305
RPPH1 ribonuclease P RNA component H1 2.76305
OSGEP O-sialoglycoprotein endopeptidase 2.76305
OR6S1 olfactory receptor, family 6, subfamily S, member 1 2.76305
PNP purine nucleoside phosphorylase 2.76305
KLHL33 kelch-like family member 33 2.76305
RNASE4 ribonuclease, RNase A family, 4 2.76305
ZNF219 zinc finger protein 219 2.76305
OR11H6 olfactory receptor, family 11, subfamily H, member 6 2.76305
OR11H4 olfactory receptor, family 11, subfamily H, member 4 2.76305
RNASE11 ribonuclease, RNase A family, 11 (non-active) 2.76305
BPIFB1 BPI fold containing family B, member 1 2.76305
RNASE12 ribonuclease, RNase A family, 12 (non-active) 2.76305
OR4K17 olfactory receptor, family 4, subfamily K, member 17 2.76305
PARP2 poly (ADP-ribose) polymerase 2 2.76305
PSMG2 proteasome (prosome, macropain) assembly chaperone 2 2.76305
SPIRE1 spire-type actin nucleation factor 1 2.76305
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1 2.76305
OR4N5 olfactory receptor, family 4, subfamily N, member 5 2.76305
LINC00271 long intergenic non-protein coding RNA 271 2.76305
TTC5 tetratricopeptide repeat domain 5 2.76305
TMEM55B transmembrane protein 55B 2.76305
OR4L1 olfactory receptor, family 4, subfamily L, member 1 2.76305
PTPN2 protein tyrosine phosphatase, non-receptor type 2 2.76305
SLMO1 slowmo homolog 1 (Drosophila) 2.76305
AFG3L2 AFG3-like AAA ATPase 2 2.76305
RNASE9 ribonuclease, RNase A family, 9 (non-active) 2.76305
CEP76 centrosomal protein 76kDa 2.76305
RNASE6 ribonuclease, RNase A family, k6 2.76305
SNORD126 small nucleolar RNA, C/D box 126 2.76305
TEP1 telomerase-associated protein 1 2.76305
TMEM253 transmembrane protein 253 2.76305
ANG angiogenin, ribonuclease, RNase A family, 5 2.76305
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 2.76305
AHI1 Abelson helper integration site 1 2.64759
CEP192 centrosomal protein 192kDa 2.64759
METTL17 methyltransferase like 17 2.64759
RNASE13 ribonuclease, RNase A family, 13 (non-active) 2.64759
SEH1L SEH1-like (S. cerevisiae) 2.64759
RNASE8 ribonuclease, RNase A family, 8 2.64759
NDRG2 NDRG family member 2 2.64759
LDLRAD4-AS1 LDLRAD4 antisense RNA 1 2.64759
CDK5RAP1 CDK5 regulatory subunit associated protein 1 2.64759
RNASE7 ribonuclease, RNase A family, 7 2.64759
TPPP2 tubulin polymerization-promoting protein family member 2 2.64759
LDLRAD4 low density lipoprotein receptor class A domain containing 4 2.64759
ARHGEF40 Rho guanine nucleotide exchange factor (GEF) 40 2.64759
MYB v-myb avian myeloblastosis viral oncogene homolog 2.64759
SLC39A2 solute carrier family 39 (zinc transporter), member 2 2.64759
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1 2.59653
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene 2.59653
WDR53 WD repeat domain 53 2.59653
MFI2-AS1 MFI2 antisense RNA 1 2.59653
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 2.59653
FBXO45 F-box protein 45 2.59653
ANKRD18DP ankyrin repeat domain 18D, pseudogene 2.59653
NANOGP1 Nanog homeobox pseudogene 1 2.59653
LMLN leishmanolysin-like (metallopeptidase M8 family) 2.59653
MIR922 microRNA 922 2.59653
RPL35A ribosomal protein L35a 2.59653
FYTTD1 forty-two-three domain containing 1 2.59653
KIAA0226 KIAA0226 2.59653
TNK2 tyrosine kinase, non-receptor, 2 2.59653
DLG1 discs, large homolog 1 (Drosophila) 2.59653
DLG1-AS1 DLG1 antisense RNA 1 2.59653
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 2.59653
IQCG IQ motif containing G 2.59653
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 2.59653
MIR4797 microRNA 4797 2.59653
SNTA1 syntrophin, alpha 1 2.59653
BDH1 3-hydroxybutyrate dehydrogenase, type 1 2.59653
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 2.59653
LINC00885 long intergenic non-protein coding RNA 885 2.49065
FAM43A family with sequence similarity 43, member A 2.49065
LINC00887 long intergenic non-protein coding RNA 887 2.49065
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 2.49065
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2.49065
MUC20 mucin 20, cell surface associated 2.49065
PCYT1A phosphate cytidylyltransferase 1, choline, alpha 2.49065
MIR5692C1 microRNA 5692c-1 2.49065
SLC2A14 solute carrier family 2 (facilitated glucose transporter), member 14 2.49065
GP5 glycoprotein V (platelet) 2.49065
SENP5 SUMO1/sentrin specific peptidase 5 2.49065
TFRC transferrin receptor 2.49065
SLC51A solute carrier family 51, alpha subunit 2.49065
CEP19 centrosomal protein 19kDa 2.49065
NCBP2 nuclear cap binding protein subunit 2, 20kDa 2.49065
MUC4 mucin 4, cell surface associated 2.49065
LSG1 large 60S subunit nuclear export GTPase 1 2.49065
E2F1 E2F transcription factor 1 2.49065
ATP13A3 ATPase type 13A3 2.49065
MISO1 mitochondrial inner membrane subdomain organizer 1 2.49065
TCTEX1D2 Tctex1 domain containing 2 2.49065
TM4SF19-TCTEX1D2 TM4SF19-TCTEX1D2 readthrough (NMD candidate) 2.49065
ZDHHC19 zinc finger, DHHC-type containing 19 2.49065
PIGX phosphatidylinositol glycan anchor biosynthesis, class X 2.49065
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z 2.49065
TM4SF19 transmembrane 4 L six family member 19 2.49065
LRRC15 leucine rich repeat containing 15 2.49065
ACTL10 actin-like 10 2.49065
C20ORF144 chromosome 20 open reading frame 144 2.49065
NECAB3 N-terminal EF-hand calcium binding protein 3 2.49065
NCBP2-AS2 NCBP2 antisense RNA 2 (head to head) 2.49065
CPN2 carboxypeptidase N, polypeptide 2 2.49065
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 2.49065
UBXN7 UBX domain protein 7 2.49065
ADIPOQ-AS1 ADIPOQ antisense RNA 1 2.44392
PXMP4 peroxisomal membrane protein 4, 24kDa 2.44392
KCNAB1-AS2 KCNAB1 antisense RNA 2 2.44392
RPL39L ribosomal protein L39-like 2.44392
GMPS guanine monphosphate synthase 2.44392
XXYLT1 xyloside xylosyltransferase 1 2.44392
XXYLT1-AS2 XXYLT1 antisense RNA 2 2.44392
ZNF341 zinc finger protein 341 2.44392
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 2.44392
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 2.44392
ADIPOQ adiponectin, C1Q and collagen domain containing 2.44392
LOC100507391 uncharacterized LOC100507391 2.44392
LINC00884 long intergenic non-protein coding RNA 884 2.44392
TMEM44-AS1 TMEM44 antisense RNA 1 2.44392
DGKG diacylglycerol kinase, gamma 90kDa 2.44392
HES1 hes family bHLH transcription factor 1 2.44392
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 2.44392
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 2.44392
TMEM44 transmembrane protein 44 2.44392
SPTSSB serine palmitoyltransferase, small subunit B 2.41451
SNORA81 small nucleolar RNA, H/ACA box 81 2.41451
HRG histidine-rich glycoprotein 2.41451
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11 2.41451
TRA2B transformer 2 beta homolog (Drosophila) 2.41451
AHSG alpha-2-HS-glycoprotein 2.41451
KCNAB1 potassium channel, voltage gated subfamily A regulatory beta subunit 1 2.41451
SNORA4 small nucleolar RNA, H/ACA box 4 2.41451
KCNAB1-AS1 KCNAB1 antisense RNA 1 2.41451
LXN latexin 2.41451
LOC253573 uncharacterized LOC253573 2.41451
LOC344887 NmrA-like family domain containing 1 pseudogene 2.41451
RTP4 receptor (chemosensory) transporter protein 4 2.41451
RTP1 receptor (chemosensory) transporter protein 1 2.41451
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 2.41451
PA2G4P4 proliferation-associated 2G4 pseudogene 4 2.41451
ETV5 ets variant 5 2.41451
CRYGS crystallin, gamma S 2.41451
SNORD2 small nucleolar RNA, C/D box 2 2.41451
GFM1 G elongation factor, mitochondrial 1 2.41451
FETUB fetuin B 2.41451
LOC101243545 uncharacterized LOC101243545 2.41451
TBCCD1 TBCC domain containing 1 2.41451
SNORA79 small nucleolar RNA, H/ACA box 79 2.41451
MIR3919 microRNA 3919 2.41451
EIF4A2 eukaryotic translation initiation factor 4A2 2.41451
RFC4 replication factor C (activator 1) 4, 37kDa 2.41451
MLF1 myeloid leukemia factor 1 2.41451
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 2.41451
LINC00886 long intergenic non-protein coding RNA 886 2.41451
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 2.41451
TIPARP-AS1 TIPARP antisense RNA 1 2.41451
PARL presenilin associated, rhomboid-like 2.39327
LEKR1 leucine, glutamate and lysine rich 1 2.39327
MIR15B microRNA 15b 2.39327
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic 2.39327
CLCN2 chloride channel, voltage-sensitive 2 2.39327
IFT80 intraflagellar transport 80 2.39327
SMC4 structural maintenance of chromosomes 4 2.39327
TRIM59 tripartite motif containing 59 2.39327
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 2.39327
RSRC1 arginine/serine-rich coiled-coil 1 2.39327
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 2.39327
ABCC5-AS1 ABCC5 antisense RNA 1 2.39327
LIPH lipase, member H 2.39327
SCHIP1 schwannomin interacting protein 1 2.39327
PTX3 pentraxin 3, long 2.39327
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2 2.39327
CCNL1 cyclin L1 2.39327
OTOL1 otolin 1 2.39327
LINC00880 long intergenic non-protein coding RNA 880 2.39327
LINC00881 long intergenic non-protein coding RNA 881 2.39327
FAM131A family with sequence similarity 131, member A 2.39327
POLR2H polymerase (RNA) II (DNA directed) polypeptide H 2.39327
MIR16-2 microRNA 16-2 2.39327
NMD3 NMD3 ribosome export adaptor 2.39327
TMEM41A transmembrane protein 41A 2.39327
CHRD chordin 2.39327
IL12A interleukin 12A 2.39327
C3ORF80 chromosome 3 open reading frame 80 2.39327
SHOX2 short stature homeobox 2 2.39327
MAP6D1 MAP6 domain containing 1 2.39327
DPPA2P3 developmental pluripotency associated 2 pseudogene 3 2.39327
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2.39327
IGF2BP2-AS1 IGF2BP2 antisense RNA 1 2.39327
THPO thrombopoietin 2.39327
ECE2 endothelin converting enzyme 2 2.36889
MAGEF1 melanoma antigen family F1 2.36889
MAP3K13 mitogen-activated protein kinase kinase kinase 13 2.36889
DVL3 dishevelled segment polarity protein 3 2.36889
MIR1224 microRNA 1224 2.36889
PQLC2L PQ loop repeat containing 2-like 2.36889
AP2M1 adaptor-related protein complex 2, mu 1 subunit 2.36889
HTR3C 5-hydroxytryptamine (serotonin) receptor 3C, ionotropic 2.36889
VWA5B2 von Willebrand factor A domain containing 5B2 2.36889
CAMK2N2 calcium/calmodulin-dependent protein kinase II inhibitor 2 2.36889
SCARNA7 small Cajal body-specific RNA 7 2.36889
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 2.36889
HTR3E 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic 2.36889
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 2.36889
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 2.36889
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3 2.36889
YEATS2 YEATS domain containing 2 2.36889
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 2.36889
EHHADH-AS1 EHHADH antisense RNA 1 2.36889
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase 2.36889
LOC647323 uncharacterized LOC647323 2.36889
ARL14 ADP-ribosylation factor-like 14 2.36889
EPHB3 EPH receptor B3 2.36889
KLHL24 kelch-like family member 24 2.36889
VEPH1 ventricular zone expressed PH domain-containing 1 2.36889
KPNA4 karyopherin alpha 4 (importin alpha 3) 2.36889
ALG3 ALG3, alpha-1,3- mannosyltransferase 2.36889
SNORD66 small nucleolar RNA, C/D box 66 2.35236
LINC00888 long intergenic non-protein coding RNA 888 2.35236
C3ORF70 chromosome 3 open reading frame 70 2.35236
KLHL6 kelch-like family member 6 2.35236
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 2.3178
OPA1-AS1 OPA1 antisense RNA 1 2.3178
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 2.3178
OPA1 optic atrophy 1 (autosomal dominant) 2.3178
MIR26A2 microRNA 26a-2 2.3178
NCEH1 neutral cholesterol ester hydrolase 1 2.3178
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 2.3178
GHSR growth hormone secretagogue receptor 2.30944
MGC2889 uncharacterized protein MGC2889 2.30944
ECT2 epithelial cell transforming 2 2.30944
MIR3147 microRNA 3147 2.30944
AVIL advillin 2.30944
MCCC1 methylcrotonoyl-CoA carboxylase 1 (alpha) 2.30944
TSFM Ts translation elongation factor, mitochondrial 2.30944
MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2.30944
ATP13A4 ATPase type 13A4 2.30944
LAMP3 lysosomal-associated membrane protein 3 2.30944
ATP13A5 ATPase type 13A5 2.30944
HRASLS HRAS-like suppressor 2.30944
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 2.30944
ATP11B ATPase, class VI, type 11B 2.283
SPATA16 spermatogenesis associated 16 2.283
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 2.283
LOC650226 ankyrin repeat domain 26 pseudogene 2.283
ZNF716 zinc finger protein 716 2.283
DKFZP434L192 uncharacterized protein DKFZp434L192 2.283
RPL22L1 ribosomal protein L22-like 1 2.283
EIF5A2 eukaryotic translation initiation factor 5A2 2.283
GUSBP10 glucuronidase, beta pseudogene 10 2.283
NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 2.26395
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 2.26395
CLDN11 claudin 11 2.26395
MRPL47 mitochondrial ribosomal protein L47 2.26395
SLC7A14 solute carrier family 7, member 14 2.26395
NLGN1 neuroligin 1 2.26395
ACTL6A actin-like 6A 2.26395
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 2.25904
SKIL SKI-like proto-oncogene 2.25904
MFN1 mitofusin 1 2.25904
GPR160 G protein-coupled receptor 160 2.25904
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 2.25904
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 2.25904
ZNF639 zinc finger protein 639 2.25904
LOC100128164 four and a half LIM domains 1 pseudogene 2.25904
PEX5L peroxisomal biogenesis factor 5-like 2.25904
SEC62 SEC62 homolog (S. cerevisiae) 2.25904
TNIK TRAF2 and NCK interacting kinase 2.25904
MIR569 microRNA 569 2.25904
PRKCI protein kinase C, iota 2.25904
FLJ46066 uncharacterized LOC401103 2.24845
PHKG1 phosphorylase kinase, gamma 1 (muscle) 2.24845
SUMF2 sulfatase modifying factor 2 2.24845
PHC3 polyhomeotic homolog 3 (Drosophila) 2.24845
FXR1 fragile X mental retardation, autosomal homolog 1 2.24845
DNAJC19 DnaJ (Hsp40) homolog, subfamily C, member 19 2.24845
CCDC39 coiled-coil domain containing 39 2.24845
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 2.24845
SAMD7 sterile alpha motif domain containing 7 2.24845
TTC14 tetratricopeptide repeat domain 14 2.24845
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 2.24845
LINC00578 long intergenic non-protein coding RNA 578 2.24845
PSPH phosphoserine phosphatase 2.24845
SNORA15 small nucleolar RNA, H/ACA box 15 2.24845
NUPR1L nuclear protein, transcriptional regulator, 1-like 2.24845
ZMAT3 zinc finger, matrin-type 3 2.24845
MRPS17 mitochondrial ribosomal protein S17 2.24139
GBAS glioblastoma amplified sequence 2.24139
LRRC34 leucine rich repeat containing 34 2.24139
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 2.24139
KCNMB2 potassium channel subfamily M regulatory beta subunit 2 2.24139
LRRC31 leucine rich repeat containing 31 2.24139
LRRIQ4 leucine-rich repeats and IQ motif containing 4 2.24139
ZNF713 zinc finger protein 713 2.24139
TERC telomerase RNA component 2.2355
MYNN myoneurin 2.2355
SEPT14 septin 14 2.2355
ACTRT3 actin-related protein T3 2.2355
SNORA22 small nucleolar RNA, H/ACA box 22 2.23078
SRD5A1 steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) 2.22123
NSUN2 NOP2/Sun RNA methyltransferase family, member 2 2.22123
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B 2.22123
LRRC14B leucine rich repeat containing 14B 2.22123
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2.22123
PDCD6 programmed cell death 6 2.21727
IRX4 iroquois homeobox 4 2.21727
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 2.21727
AHRR aryl-hydrocarbon receptor repressor 2.21727
EXOC3-AS1 EXOC3 antisense RNA 1 2.21727
CLPTM1L CLPTM1-like 2.21727
MIR4457 microRNA 4457 2.21727
C5ORF38 chromosome 5 open reading frame 38 2.21727
NKD2 naked cuticle homolog 2 (Drosophila) 2.21727
MIR4635 microRNA 4635 2.21727
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 2.21727
SEC61G Sec61 gamma subunit 2.21727
IRX2 iroquois homeobox 2 2.21727
UBE2QL1 ubiquitin-conjugating enzyme E2Q family-like 1 2.21727
LOC100506688 uncharacterized LOC100506688 2.21727
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7 2.21727
CCDC127 coiled-coil domain containing 127 2.21727
PP7080 uncharacterized LOC25845 2.21258
MRPL36 mitochondrial ribosomal protein L36 2.21258
SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 2.21258
MIR4454 microRNA 4454 2.21258
MED10 mediator complex subunit 10 2.21258
FLJ33360 FLJ33360 protein 2.21258
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 2.21258
MIR4456 microRNA 4456 2.21258
EXOC3 exocyst complex component 3 2.21258
NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) 2.21258
MIR4277 microRNA 4277 2.21258
TRIP13 thyroid hormone receptor interactor 13 2.21258
CEP72 centrosomal protein 72kDa 2.21258
TPPP tubulin polymerization promoting protein 2.21258
LOC100996325 uncharacterized LOC100996325 2.21258
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 2.21096
EGFR-AS1 EGFR antisense RNA 1 2.21096
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 2.21096
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18 2.21096
LPCAT1 lysophosphatidylcholine acyltransferase 1 2.21096
C5ORF49 chromosome 5 open reading frame 49 2.21096
LOC728613 programmed cell death 6 pseudogene 2.21096
SDHAP3 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3 2.21096
IRX1 iroquois homeobox 1 2.21096
TERT telomerase reverse transcriptase 2.21096
FASTKD3 FAST kinase domains 3 2.20309
CMBL carboxymethylenebutenolidase homolog (Pseudomonas) 2.20309
ZDHHC11 zinc finger, DHHC-type containing 11 2.20309
ANKRD33B ankyrin repeat domain 33B 2.20309
ROPN1L rhophilin associated tail protein 1-like 2.20309
ROPN1L-AS1 ROPN1L antisense RNA 1 2.20309
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 2.20309
DAP death-associated protein 2.20309
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase 2.20309
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 2.20309
FAM173B family with sequence similarity 173, member B 2.20309
EGFR epidermal growth factor receptor 2.20309
TARS threonyl-tRNA synthetase 2.20053
DROSHA drosha, ribonuclease type III 2.20053
C5ORF22 chromosome 5 open reading frame 22 2.20053
LOC729506 uncharacterized LOC729506 2.20053
MIR4636 microRNA 4636 2.20053
LOC285696 uncharacterized LOC285696 2.20053
MIR4458 microRNA 4458 2.20053
LOC340113 uncharacterized LOC340113 2.19863
ZNF622 zinc finger protein 622 2.19863
SUB1 SUB1 homolog (S. cerevisiae) 2.19863
RXFP3 relaxin/insulin-like family peptide receptor 3 2.19863
NPR3 natriuretic peptide receptor 3 2.19863
MARCH11 membrane-associated ring finger (C3HC4) 11 2.19863
FAM134B family with sequence similarity 134, member B 2.19863
PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 2.19863
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 2.19863
CARD6 caspase recruitment domain family, member 6 2.19863
BASP1 brain abundant, membrane attached signal protein 1 2.19863
TAS2R1 taste receptor, type 2, member 1 2.19863
SNORD72 small nucleolar RNA, C/D box 72 2.19863
LOC100506548 uncharacterized LOC100506548 2.19863
RPL37 ribosomal protein L37 2.19863
TTC33 tetratricopeptide repeat domain 33 2.19863
SNORD123 small nucleolar RNA, C/D box 123 2.19863
MYO10 myosin X 2.19301
SLC45A2 solute carrier family 45, member 2 2.19301
AMACR alpha-methylacyl-CoA racemase 2.19301
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 2.19301
LOC401177 uncharacterized LOC401177 2.19301
C7 complement component 7 2.19301
PTGER4 prostaglandin E receptor 4 (subtype EP4) 2.19301
C1QTNF3 C1q and tumor necrosis factor related protein 3 2.19301
MROH2B maestro heat-like repeat family member 2B 2.19301
RICTOR RPTOR independent companion of MTOR, complex 2 2.18778
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 2.18778
FAM105A family with sequence similarity 105, member A 2.18778
EGFLAM-AS2 EGFLAM antisense RNA 2 2.18778
MIR4637 microRNA 4637 2.18778
EGFLAM-AS4 EGFLAM antisense RNA 4 2.18778
SPEF2 sperm flagellar 2 2.18778
LOC100130744 uncharacterized LOC100130744 2.18778
NUP155 nucleoporin 155kDa 2.18778
FYB FYN binding protein 2.18778
GDNF-AS1 GDNF antisense RNA 1 (head to head) 2.18778
LIFR leukemia inhibitory factor receptor alpha 2.18778
DNAH5 dynein, axonemal, heavy chain 5 2.18778
ANKH ANKH inorganic pyrophosphate transport regulator 2.18778
GDNF glial cell derived neurotrophic factor 2.18778
C9 complement component 9 2.18778
C6 complement component 6 2.18778
C5ORF42 chromosome 5 open reading frame 42 2.18778
IL7R interleukin 7 receptor 2.18778
EGFLAM EGF-like, fibronectin type III and laminin G domains 2.18778
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 2.18778
MIR3650 microRNA 3650 2.18778
WDR70 WD repeat domain 70 2.18778
OXCT1 3-oxoacid CoA transferase 1 2.18124
OSMR oncostatin M receptor 2.18124
TRIO trio Rho guanine nucleotide exchange factor 2.18124
C5ORF51 chromosome 5 open reading frame 51 2.18124
CAPSL calcyphosine-like 2.18124
NIPBL Nipped-B homolog (Drosophila) 2.18124
FBXO4 F-box protein 4 2.18124
LOC646719 2.18124
RANBP3L RAN binding protein 3-like 2.17694
MIR580 microRNA 580 2.17694
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1 2.17694
FBXL7 F-box and leucine-rich repeat protein 7 2.17694
UGT3A2 UDP glycosyltransferase 3 family, polypeptide A2 2.17694
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 2.17694
LMBRD2 LMBR1 domain containing 2 2.17694
RAD1 RAD1 checkpoint DNA exonuclease 2.16947
PRLR prolactin receptor 2.16947
BRIX1 BRX1, biogenesis of ribosomes 2.16947
RAI14 retinoic acid induced 14 2.16947
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 2.16947
TTC23L tetratricopeptide repeat domain 23-like 2.16947
AGXT2 alanine--glyoxylate aminotransferase 2 2.16947
LOC340107 uncharacterized LOC340107 2.16307
SPIN4 spindlin family, member 4 2.14731
SNORA35 small nucleolar RNA, H/ACA box 35 2.14311
HEPH hephaestin 2.14311
MSN moesin 2.14311
VSIG4 V-set and immunoglobulin domain containing 4 2.14311
MIR223 microRNA 223 2.14311
EDA2R ectodysplasin A2 receptor 2.14311
SGK1 serum/glucocorticoid regulated kinase 1 2.14116
MIR1264 microRNA 1264 2.14116
MIR764 microRNA 764 2.14116
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 2.14116
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled 2.14116
HMGA1P7 high mobility group AT-hook 1 pseudogene 7 2.14116
MIR1912 microRNA 1912 2.14116
MTMR2 myotubularin related protein 2 2.12703
CEP57 centrosomal protein 57kDa 2.12703
FAM76B family with sequence similarity 76, member B 2.12703
KDM4E lysine (K)-specific demethylase 4E 2.12225
KDM4D lysine (K)-specific demethylase 4D 2.12225
ENDOD1 endonuclease domain containing 1 2.12225
SRSF8 serine/arginine-rich splicing factor 8 2.12225
RNASE3 ribonuclease, RNase A family, 3 2.12225
CWC15 CWC15 spliceosome-associated protein 2.12225
SESN3 sestrin 3 2.12225
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) 2.11167
ECRP ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) pseudogene 2.11167
MAML2 mastermind-like 2 (Drosophila) 2.10992
FAM157A family with sequence similarity 157, member A 2.10992
SNORD27 small nucleolar RNA, C/D box 27 2.10607
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2 2.10548
APOD apolipoprotein D 2.10177
MIR570 microRNA 570 2.09628
CCDC50 coiled-coil domain containing 50 2.09529
PYDC2 pyrin domain containing 2 2.09529
DMRT3 doublesex and mab-3 related transcription factor 3 2.09314
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 2.09294
DMRT2 doublesex and mab-3 related transcription factor 2 2.09294
GLIS3 GLIS family zinc finger 3 2.0925
GLIS3-AS1 GLIS3 antisense RNA 1 2.0925
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2 2.0925
KIAA0020 KIAA0020 2.0925
VLDLR very low density lipoprotein receptor 2.0925
MIR101-2 microRNA 101-2 2.09117
JAK2 Janus kinase 2 2.09117
UTS2B urotensin 2B 2.09117
GLDC glycine dehydrogenase (decarboxylating) 2.09117
INSL6 insulin-like 6 2.09117
OR11H2 olfactory receptor, family 11, subfamily H, member 2 2.09073
IQCJ IQ motif containing J 2.09073
MFSD1 major facilitator superfamily domain containing 1 2.09073
PTPRD protein tyrosine phosphatase, receptor type, D 2.08947
KANK1 KN motif and ankyrin repeat domains 1 2.08887
RFX3 regulatory factor X, 3 (influences HLA class II expression) 2.08882
C9ORF66 chromosome 9 open reading frame 66 2.08877
DMRT1 doublesex and mab-3 related transcription factor 1 2.08877
CBWD1 COBW domain containing 1 2.08856
FOXD4 forkhead box D4 2.08839
AK3 adenylate kinase 3 2.08781
RCL1 RNA terminal phosphate cyclase-like 1 2.08781
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 2.08781
CDC37L1 cell division cycle 37-like 1 2.08781
RLN2 relaxin 2 2.08781
SPATA6L spermatogenesis associated 6-like 2.08781
IL33 interleukin 33 2.08781
RLN1 relaxin 1 2.08781
TPD52L3 tumor protein D52-like 3 2.08781
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 2.08781
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 2.08781
OSTN osteocrin 2.08781
INSL4 insulin-like 4 (placenta) 2.08781
KNG1 kininogen 1 2.08712
DOCK8 dedicator of cytokinesis 8 2.0845
PDCD1LG2 programmed cell death 1 ligand 2 2.08391
SNAR-I small ILF3/NF90-associated RNA I 2.08391
GMNC geminin coiled-coil domain containing 2.08391
CD274 CD274 molecule 2.08391
SST somatostatin 2.08334
BCL6 B-cell CLL/lymphoma 6 2.08334
RTP2 receptor (chemosensory) transporter protein 2 2.08334
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 2.08334
LOC100131635 hCG1645011-like 2.08334
RANBP6 RAN binding protein 6 2.08066
P3H2 prolyl 3-hydroxylase 2 2.08066
TPRG1-AS2 TPRG1 antisense RNA 2 2.08066
MIR4665 microRNA 4665 2.08066
IL1RAP interleukin 1 receptor accessory protein 2.08066
MIR944 microRNA 944 2.08066
CLDN16 claudin 16 2.08066
CLDN1 claudin 1 2.08066
TMEM207 transmembrane protein 207 2.08066
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein 2.08066
KIAA2026 KIAA2026 2.07822
TP63 tumor protein p63 2.07822
MLANA melan-A 2.07822
ERMP1 endoplasmic reticulum metallopeptidase 1 2.07822
TPRG1 tumor protein p63 regulated 1 2.07558
FLJ42393 uncharacterized LOC401105 2.07558
LPP-AS2 LPP antisense RNA 2 2.07558
MB21D2 Mab-21 domain containing 2 2.0752
LPP LIM domain containing preferred translocation partner in lipoma 2.07346
SNORA63 small nucleolar RNA, H/ACA box 63 2.07338
FGF12 fibroblast growth factor 12 2.0731
FNDC3B fibronectin type III domain containing 3B 2.0731
ZNF479 zinc finger protein 479 2.0731
PLD1 phospholipase D1, phosphatidylcholine-specific 2.0731
TMEM212 transmembrane protein 212 2.0731
NAALADL2-AS3 NAALADL2 antisense RNA 3 2.0703
IAPP islet amyloid polypeptide 2.07018
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 2.06989
MIR4789 microRNA 4789 2.06989
GOLT1B golgi transport 1B 2.06989
OR4M1 olfactory receptor, family 4, subfamily M, member 1 2.06989
RECQL RecQ helicase-like 2.06989
OR4Q3 olfactory receptor, family 4, subfamily Q, member 3 2.06989
SLCO1A2 solute carrier organic anion transporter family, member 1A2 2.06707
OR4N2 olfactory receptor, family 4, subfamily N, member 2 2.06626
OR4K1 olfactory receptor, family 4, subfamily K, member 1 2.06626
GYS2 glycogen synthase 2 (liver) 2.06626
OR4K2 olfactory receptor, family 4, subfamily K, member 2 2.06626
OR4K5 olfactory receptor, family 4, subfamily K, member 5 2.06626
LDHB lactate dehydrogenase B 2.06626
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 2.06592
SI sucrase-isomaltase (alpha-glucosidase) 2.06505
SLITRK3 SLIT and NTRK-like family, member 3 2.06473
BCHE butyrylcholinesterase 2.06473
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2 2.06473
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 2.06341
ZBBX zinc finger, B-box domain containing 2.06316
WDR49 WD repeat domain 49 2.06316
SOX2-OT SOX2 overlapping transcript 2.06316
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 2.06316
GOLIM4 golgi integral membrane protein 4 2.06316
SOX2 SRY (sex determining region Y)-box 2 2.06316
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 2.06316
PDCD10 programmed cell death 10 2.06316
MIR551B microRNA 551b 2.0622
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 2.0615
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 2.06105
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 2.06105
EGFEM1P EGF-like and EMI domain containing 1, pseudogene 2.06105
MECOM MDS1 and EVI1 complex locus 2.06061
ETNK1 ethanolamine kinase 1 2.05973
C2CD5 C2 calcium-dependent domain containing 5 2.05965
MIR920 microRNA 920 2.05673
MIR4278 microRNA 4278 2.05661
PAPD7 PAP associated domain containing 7 2.05661
BRD9 bromodomain containing 9 2.05559
LOC442132 golgin A6 family-like 1 pseudogene 2.05559
LINC00477 long intergenic non-protein coding RNA 477 2.05441
ADCY2 adenylate cyclase 2 (brain) 2.05422
SOX5 SRY (sex determining region Y)-box 5 2.05408
ZFR zinc finger RNA binding protein 2.05311
MTMR12 myotubularin related protein 12 2.05311
MIR4279 microRNA 4279 2.05311
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 2.05242
LOC285692 uncharacterized LOC285692 2.0522
GOLPH3 golgi phosphoprotein 3 (coat-protein) 2.0521
PDZD2 PDZ domain containing 2 2.0521
CTNND2 catenin (cadherin-associated protein), delta 2 2.05129
LSP1P3 lymphocyte-specific protein 1 pseudogene 3 2.05072
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 2.05045
PRDM9 PR domain containing 9 2.05041
CDH10 cadherin 10, type 2 (T2-cadherin) 2.05014
CDH9 cadherin 9, type 2 (T1-cadherin) 2.04969
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene 2.04969
CDH18 cadherin 18, type 2 2.0489
CDH12 cadherin 12, type 2 (N-cadherin 2) 2.0489
GUSBP1 glucuronidase, beta pseudogene 1 2.0489

low copy number

Symbol Name Standardized Value
SCN9A sodium channel, voltage gated, type IX alpha subunit -3.12964
SCN1A sodium channel, voltage gated, type I alpha subunit -3.05881
MIR4509-1 microRNA 4509-1 -2.86134