CHP-212 Gene Set

Dataset GDSC Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

296 genes with high or low expression in CHP-212 relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
NOL11 nucleolar protein 11 3.59357
TRPA1 transient receptor potential cation channel, subfamily A, member 1 2.83061
C1D C1D nuclear receptor corepressor 2.76321
NME1 NME/NM23 nucleoside diphosphate kinase 1 2.75892
MRPS7 mitochondrial ribosomal protein S7 2.7034
TRIB2 tribbles pseudokinase 2 2.62166
NANOG Nanog homeobox 2.56566
CDH10 cadherin 10, type 2 (T2-cadherin) 2.53532
DYNLT1 dynein, light chain, Tctex-type 1 2.52272
RET ret proto-oncogene 2.46866
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 2.42834
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2.38441
GINS3 GINS complex subunit 3 (Psf3 homolog) 2.34628
ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 2.34145
GNAT3 guanine nucleotide binding protein, alpha transducing 3 2.30365
GAL galanin/GMAP prepropeptide 2.2827
CHODL chondrolectin 2.24952
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 2.22516
SPAG9 sperm associated antigen 9 2.1931
SLC5A7 solute carrier family 5 (sodium/choline cotransporter), member 7 2.16711
TBX2 T-box 2 2.15181
LGI1 leucine-rich, glioma inactivated 1 2.13592
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 2.13283
CRH corticotropin releasing hormone 2.12694
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5 2.12074
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 2.10607
COX11 COX11 cytochrome c oxidase copper chaperone 2.09784
SLC35B1 solute carrier family 35, member B1 2.09572
KLHL20 kelch-like family member 20 2.07775
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 2.07253
HAS2 hyaluronan synthase 2 2.05999
SUMO4 small ubiquitin-like modifier 4 2.05742
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 2.02344
CD36 CD36 molecule (thrombospondin receptor) 2.00524
AMZ2 archaelysin family metallopeptidase 2 2.0009
NPY neuropeptide Y 1.973
CERK ceramide kinase 1.96801
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 1.94567
MEIS2 Meis homeobox 2 1.93997
EPHA3 EPH receptor A3 1.93654
FIGF c-fos induced growth factor (vascular endothelial growth factor D) 1.91448
OBP2A odorant binding protein 2A 1.90713
HAND2-AS1 HAND2 antisense RNA 1 (head to head) 1.89764
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 1.88384
SUSD5 sushi domain containing 5 1.87526
PRKCA protein kinase C, alpha 1.87245
KCTD3 potassium channel tetramerization domain containing 3 1.85408
TLK2 tousled-like kinase 2 1.84641
NKX3-1 NK3 homeobox 1 1.84498
CUL1 cullin 1 1.83984
KIAA0087 KIAA0087 1.82356
MAB21L2 mab-21-like 2 (C. elegans) 1.81415
TRIO trio Rho guanine nucleotide exchange factor 1.81206
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) 1.79953
COIL coilin 1.79871
SCN9A sodium channel, voltage gated, type IX alpha subunit 1.79348
CBX1 chromobox homolog 1 1.77398
HOXD4 homeobox D4 1.77375
PIK3C2G phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma 1.76975
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal) 1.76342
CHRM2 cholinergic receptor, muscarinic 2 1.759
SMAD1 SMAD family member 1 1.75153
LPO lactoperoxidase 1.7429
CDK2AP1 cyclin-dependent kinase 2 associated protein 1 1.73669
RELN reelin 1.7355
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 1.73189
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 1.70899
NPR1 natriuretic peptide receptor 1 1.68701
PTRH2 peptidyl-tRNA hydrolase 2 1.68172
MAB21L1 mab-21-like 1 (C. elegans) 1.68082
PLAC1 placenta-specific 1 1.66715
USP6 ubiquitin specific peptidase 6 1.66063
KATNB1 katanin p80 (WD repeat containing) subunit B 1 1.6596
NAE1 NEDD8 activating enzyme E1 subunit 1 1.65236
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 1.64865
TENM4 teneurin transmembrane protein 4 1.63699
MAN1A1 mannosidase, alpha, class 1A, member 1 1.62936
MED13 mediator complex subunit 13 1.61618
BRCA1 breast cancer 1, early onset 1.6098
SAP30BP SAP30 binding protein 1.59838
TLE4 transducin-like enhancer of split 4 1.59081
METTL7A methyltransferase like 7A 1.58996
NUP85 nucleoporin 85kDa 1.5827
IGF2 insulin-like growth factor 2 1.58178
PHOX2B paired-like homeobox 2b 1.57776
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 1.57215
RGL1 ral guanine nucleotide dissociation stimulator-like 1 1.57046
LRRC59 leucine rich repeat containing 59 1.56739
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 1.56556
PPP1R13B protein phosphatase 1, regulatory subunit 13B 1.56297
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) 1.56197
NPEPPS aminopeptidase puromycin sensitive 1.55674
ANGPT1 angiopoietin 1 1.55252
ACADL acyl-CoA dehydrogenase, long chain 1.54709
MYCNOS MYCN opposite strand 1.5463
TLX2 T-cell leukemia homeobox 2 1.53987
RAD51C RAD51 paralog C 1.51655
OTC ornithine carbamoyltransferase 1.51549
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 1.50904
CCDC47 coiled-coil domain containing 47 1.50458
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 1.50162
GPR50 G protein-coupled receptor 50 1.49608
HOXD9 homeobox D9 1.49561
PCDH9 protocadherin 9 1.49488
SPRY2 sprouty homolog 2 (Drosophila) 1.4903
TRIM9 tripartite motif containing 9 1.48665
IGF2-AS IGF2 antisense RNA 1.47399
PPBPP2 pro-platelet basic protein pseudogene 2 1.4729
HN1 hematological and neurological expressed 1 1.46669
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 1.46045
ZBTB18 zinc finger and BTB domain containing 18 1.45963
SNF8 SNF8, ESCRT-II complex subunit 1.45725
AMBN ameloblastin (enamel matrix protein) 1.45513
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 1.45489
WT1-AS WT1 antisense RNA 1.45455
TMEM100 transmembrane protein 100 1.44975
GPS1 G protein pathway suppressor 1 1.44233
FLT1 fms-related tyrosine kinase 1 1.43238
FAT4 FAT atypical cadherin 4 1.43201
PPAP2A phosphatidic acid phosphatase type 2A 1.43083
ANK2 ankyrin 2, neuronal 1.4305
CHRNA5 cholinergic receptor, nicotinic, alpha 5 (neuronal) 1.42944
SPHAR S-phase response (cyclin related) 1.42944
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha 1.42689
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 1.42675
NPY5R neuropeptide Y receptor Y5 1.42417
MTMR4 myotubularin related protein 4 1.41693

low expression

Symbol Name Standardized Value
RLF rearranged L-myc fusion -3.53725
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z -3.5372
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic -3.47029
HLA-DMB major histocompatibility complex, class II, DM beta -3.00987
SIX2 SIX homeobox 2 -3.00886
ZDHHC7 zinc finger, DHHC-type containing 7 -2.72289
NRD1 nardilysin (N-arginine dibasic convertase) -2.72184
KITLG KIT ligand -2.7093
GPBP1L1 GC-rich promoter binding protein 1-like 1 -2.62834
HHLA3 HERV-H LTR-associating 3 -2.55322
PLEKHM2 pleckstrin homology domain containing, family M (with RUN domain) member 2 -2.52266
MTF1 metal-regulatory transcription factor 1 -2.4744
IL23A interleukin 23, alpha subunit p19 -2.36397
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 -2.34787
LY96 lymphocyte antigen 96 -2.33319
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae) -2.32599
SZT2 seizure threshold 2 homolog (mouse) -2.31645
RRAGC Ras-related GTP binding C -2.31583
SRSF4 serine/arginine-rich splicing factor 4 -2.289
ACSL5 acyl-CoA synthetase long-chain family member 5 -2.25495
TRIM62 tripartite motif containing 62 -2.24659
TAT tyrosine aminotransferase -2.24461
GSTA3 glutathione S-transferase alpha 3 -2.23372
ZC3H12A zinc finger CCCH-type containing 12A -2.14434
KLHL28 kelch-like family member 28 -2.10916
GPR153 G protein-coupled receptor 153 -2.1048
EFHD2 EF-hand domain family, member D2 -2.1024
EFR3B EFR3 homolog B (S. cerevisiae) -2.09946
KIAA0319L KIAA0319-like -2.08036
ANO10 anoctamin 10 -2.06353
WDR33 WD repeat domain 33 -2.0566
KLHL29 kelch-like family member 29 -2.05152
SYT5 synaptotagmin V -2.039
SIRT2 sirtuin 2 -2.03875
RNF10 ring finger protein 10 -1.99068
AHCYL1 adenosylhomocysteinase-like 1 -1.98221
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -1.94461
TTC4 tetratricopeptide repeat domain 4 -1.93921
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma -1.93725
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 -1.92289
TM9SF4 transmembrane 9 superfamily protein member 4 -1.89034
HDAC1 histone deacetylase 1 -1.89027
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta -1.87551
MACROD1 MACRO domain containing 1 -1.86752
HTATIP2 HIV-1 Tat interactive protein 2, 30kDa -1.86369
EDEM2 ER degradation enhancer, mannosidase alpha-like 2 -1.85658
IL36A interleukin 36, alpha -1.8563
APOC1 apolipoprotein C-I -1.84751
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2 -1.83276
ZNF544 zinc finger protein 544 -1.82967
NAP1L4 nucleosome assembly protein 1-like 4 -1.82511
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa -1.81518
PLAG1 pleiomorphic adenoma gene 1 -1.81321
ELOVL1 ELOVL fatty acid elongase 1 -1.80579
COX4I1 cytochrome c oxidase subunit IV isoform 1 -1.7885
SLC8B1 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 -1.7862
MED18 mediator complex subunit 18 -1.78559
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1 -1.77399
VASP vasodilator-stimulated phosphoprotein -1.76868
TRAPPC3 trafficking protein particle complex 3 -1.76622
TESK2 testis-specific kinase 2 -1.76469
ONECUT2 one cut homeobox 2 -1.7621
TALDO1 transaldolase 1 -1.76207
NUP98 nucleoporin 98kDa -1.75683
PIM2 Pim-2 proto-oncogene, serine/threonine kinase -1.74604
CTBS chitobiase, di-N-acetyl- -1.74347
PAX2 paired box 2 -1.74271
PIR pirin (iron-binding nuclear protein) -1.74037
RNF19B ring finger protein 19B -1.73927
HIST1H3B histone cluster 1, H3b -1.70739
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 -1.70399
ALOX15B arachidonate 15-lipoxygenase, type B -1.70343
RTCA RNA 3'-terminal phosphate cyclase -1.69806
HYI hydroxypyruvate isomerase (putative) -1.69797
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -1.69412
HES2 hes family bHLH transcription factor 2 -1.69255
DOC2B double C2-like domains, beta -1.69011
SFMBT1 Scm-like with four mbt domains 1 -1.68577
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -1.68413
AP2A2 adaptor-related protein complex 2, alpha 2 subunit -1.68106
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -1.67735
PARP3 poly (ADP-ribose) polymerase family, member 3 -1.668
PTPN1 protein tyrosine phosphatase, non-receptor type 1 -1.65902
DNM2 dynamin 2 -1.65376
MFN2 mitofusin 2 -1.65288
F11R F11 receptor -1.64435
TM2D1 TM2 domain containing 1 -1.64351
CSHL1 chorionic somatomammotropin hormone-like 1 -1.63992
IQCC IQ motif containing C -1.63849
PVR poliovirus receptor -1.63397
SIGLEC8 sialic acid binding Ig-like lectin 8 -1.63052
ORAI3 ORAI calcium release-activated calcium modulator 3 -1.62908
CASZ1 castor zinc finger 1 -1.62558
MICA MHC class I polypeptide-related sequence A -1.62521
CEP104 centrosomal protein 104kDa -1.6246
ZRSR1 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 1 -1.62118
LINC00869 long intergenic non-protein coding RNA 869 -1.61329
LHX1 LIM homeobox 1 -1.61096
KLRG1 killer cell lectin-like receptor subfamily G, member 1 -1.6013
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 -1.5955
ZNF106 zinc finger protein 106 -1.5946
ASPHD1 aspartate beta-hydroxylase domain containing 1 -1.59327
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b -1.59308
FICD FIC domain containing -1.59184
ECE1 endothelin converting enzyme 1 -1.5836
JAK2 Janus kinase 2 -1.58329
FAM3A family with sequence similarity 3, member A -1.58265
FAF1 Fas (TNFRSF6) associated factor 1 -1.58177
RBM15 RNA binding motif protein 15 -1.57708
MYC v-myc avian myelocytomatosis viral oncogene homolog -1.5693
ARID5A AT rich interactive domain 5A (MRF1-like) -1.56872
IBSP integrin-binding sialoprotein -1.56317
KIAA0754 KIAA0754 -1.55994
ZFYVE9 zinc finger, FYVE domain containing 9 -1.55424
DDIT3 DNA-damage-inducible transcript 3 -1.55133
ELL3 elongation factor RNA polymerase II-like 3 -1.54708
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -1.54696
AK2 adenylate kinase 2 -1.54651
LTBP4 latent transforming growth factor beta binding protein 4 -1.5407
ZNF480 zinc finger protein 480 -1.54024
TRNAU1AP tRNA selenocysteine 1 associated protein 1 -1.53763
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -1.53667
HOXB3 homeobox B3 -1.53367
ABI3BP ABI family, member 3 (NESH) binding protein -1.52624
RNF141 ring finger protein 141 -1.52554
TSHR thyroid stimulating hormone receptor -1.51919
CBX7 chromobox homolog 7 -1.51591
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 -1.51097
ZBTB33 zinc finger and BTB domain containing 33 -1.50972
COPG1 coatomer protein complex, subunit gamma 1 -1.50482
CEPT1 choline/ethanolamine phosphotransferase 1 -1.50051
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) -1.50009
MED8 mediator complex subunit 8 -1.49858
CLMN calmin (calponin-like, transmembrane) -1.49843
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) -1.49835
BSDC1 BSD domain containing 1 -1.49602
BMP2K BMP2 inducible kinase -1.49266
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa -1.49261
ETV7 ets variant 7 -1.49113
KRT15 keratin 15, type I -1.48141
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic -1.47636
TMEM50A transmembrane protein 50A -1.47465
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -1.47351
BMPER BMP binding endothelial regulator -1.47317
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -1.47148
NUCB2 nucleobindin 2 -1.47148
HIPK1 homeodomain interacting protein kinase 1 -1.46805
RASAL1 RAS protein activator like 1 (GAP1 like) -1.46528
GRIK4 glutamate receptor, ionotropic, kainate 4 -1.46359
JAK1 Janus kinase 1 -1.45914
PPP1R15A protein phosphatase 1, regulatory subunit 15A -1.45649
ERO1L ERO1-like (S. cerevisiae) -1.45479
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit -1.45294
CYP2D6 cytochrome P450, family 2, subfamily D, polypeptide 6 -1.45102
TSSC4 tumor suppressing subtransferable candidate 4 -1.44716
ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide -1.4446
TMEM40 transmembrane protein 40 -1.4408
SIX5 SIX homeobox 5 -1.44028
PDK1 pyruvate dehydrogenase kinase, isozyme 1 -1.43829
IRF9 interferon regulatory factor 9 -1.43703
MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase -1.43624
TMEM158 transmembrane protein 158 (gene/pseudogene) -1.43565
AGFG1 ArfGAP with FG repeats 1 -1.43362
RAB6B RAB6B, member RAS oncogene family -1.42811
BIK BCL2-interacting killer (apoptosis-inducing) -1.42777
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -1.42695
IFITM1 interferon induced transmembrane protein 1 -1.42551
OSGEP O-sialoglycoprotein endopeptidase -1.42324
PIGV phosphatidylinositol glycan anchor biosynthesis, class V -1.41674