COLO-205 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Colorectal Carcinoma Metastasis (Cell Model Passports, SIDM00826)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00826
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Genes

194 proteins associated with the cell line COLO-205 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
A2M alpha-2-macroglobulin
AACS acetoacetyl-CoA synthetase
ADAM1A ADAM metallopeptidase domain 1A (pseudogene)
ANXA4 annexin A4
ARFGAP2 ADP-ribosylation factor GTPase activating protein 2
ARFIP1 ADP-ribosylation factor interacting protein 1
ARHGAP26 Rho GTPase activating protein 26
ARMC8 armadillo repeat containing 8
BYSL bystin-like
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta
CC2D1A coiled-coil and C2 domain containing 1A
CCPG1 cell cycle progression 1
CD320 CD320 molecule
CHMP4B charged multivesicular body protein 4B
CIB1 calcium and integrin binding 1 (calmyrin)
CIZ1 CDKN1A interacting zinc finger protein 1
CLEC11A C-type lectin domain family 11, member A
CLN5 ceroid-lipofuscinosis, neuronal 5
CLYBL citrate lyase beta like
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3
COG2 component of oligomeric golgi complex 2
COG6 component of oligomeric golgi complex 6
CRIPT cysteine-rich PDZ-binding protein
CRLF2 cytokine receptor-like factor 2
CST3 cystatin C
CSTB cystatin B (stefin B)
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3
EFHD2 EF-hand domain family, member D2
EPHB2 EPH receptor B2
EXOC4 exocyst complex component 4
FOXP4 forkhead box P4
GLO1 glyoxalase I
GMDS GDP-mannose 4,6-dehydratase
GRN granulin
GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa
HBS1L HBS1-like translational GTPase
HIP1R huntingtin interacting protein 1 related
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1
LCN2 lipocalin 2
LGALS8 lectin, galactoside-binding, soluble, 8
LOC100422168 olfactory receptor, family 4, subfamily C, member 46 pseudogene
LOC101060177 uncharacterized LOC101060177
LOC442389 interferon induced transmembrane protein pseudogene
LRBA LPS-responsive vesicle trafficking, beach and anchor containing
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
MAP7 microtubule-associated protein 7
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
MIPEP mitochondrial intermediate peptidase
MIS12 MIS12 kinetochore complex component
MNX1 motor neuron and pancreas homeobox 1
MPST mercaptopyruvate sulfurtransferase
MYCBP MYC binding protein
MZT2A mitotic spindle organizing protein 2A
NDUFAF5 NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
NT5C3A 5'-nucleotidase, cytosolic IIIA
NTPCR nucleoside-triphosphatase, cancer-related
NUCB2 nucleobindin 2
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9
OARD1 O-acyl-ADP-ribose deacylase 1
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PDCD10 programmed cell death 10
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PEF1 penta-EF-hand domain containing 1
PHF23 PHD finger protein 23
PKLR pyruvate kinase, liver and RBC
PLCH1 phospholipase C, eta 1
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa
POMT2 protein-O-mannosyltransferase 2
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2
PRSS2 protease, serine, 2 (trypsin 2)
RAP2B RAP2B, member of RAS oncogene family
SACM1L SAC1 suppressor of actin mutations 1-like (yeast)
SEPHS2 selenophosphate synthetase 2
SETX senataxin
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC25A35 solute carrier family 25, member 35
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SMG9 SMG9 nonsense mediated mRNA decay factor
SORBS1 sorbin and SH3 domain containing 1
SRCAP Snf2-related CREBBP activator protein
STK24 serine/threonine kinase 24
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TBCC tubulin folding cofactor C
TMX3 thioredoxin-related transmembrane protein 3
TNS4 tensin 4
TOLLIP toll interacting protein
TPT1 tumor protein, translationally-controlled 1
TSC22D1 TSC22 domain family, member 1
TST thiosulfate sulfurtransferase (rhodanese)
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
UFM1 ubiquitin-fold modifier 1
USP8 ubiquitin specific peptidase 8
WFS1 Wolfram syndrome 1 (wolframin)
ZFAND6 zinc finger, AN1-type domain 6

Symbol Name
AAAS achalasia, adrenocortical insufficiency, alacrimia
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ACTA1 actin, alpha 1, skeletal muscle
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1
BASP1 brain abundant, membrane attached signal protein 1
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CDC40 cell division cycle 40
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CHD3 chromodomain helicase DNA binding protein 3
CLK3 CDC-like kinase 3
CLMN calmin (calponin-like, transmembrane)
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa
DBN1 drebrin 1
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
DHRS1 dehydrogenase/reductase (SDR family) member 1
DHRS7 dehydrogenase/reductase (SDR family) member 7
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2
E2F4 E2F transcription factor 4, p107/p130-binding
EPN1 epsin 1
ERGIC2 ERGIC and golgi 2
FHOD1 formin homology 2 domain containing 1
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GOLGA7 golgin A7
HAUS6 HAUS augmin-like complex, subunit 6
HEMGN hemogen
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
HSDL1 hydroxysteroid dehydrogenase like 1
ILF2 interleukin enhancer binding factor 2
KNOP1 lysine-rich nucleolar protein 1
MIR513A1 microRNA 513a-1
MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
MSK32 antigen identified by monoclonal antibody K66
NCOA6 nuclear receptor coactivator 6
NDC1 NDC1 transmembrane nucleoporin
NDUFAF1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
NIP7 NIP7, nucleolar pre-rRNA processing protein
NOL11 nucleolar protein 11
NOM1 nucleolar protein with MIF4G domain 1
NXF1 nuclear RNA export factor 1
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II
PAXBP1 PAX3 and PAX7 binding protein 1
PCNT pericentrin
PCYOX1 prenylcysteine oxidase 1
PIGG phosphatidylinositol glycan anchor biosynthesis, class G
PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
POFUT1 protein O-fucosyltransferase 1
POGLUT1 protein O-glucosyltransferase 1
POGZ pogo transposable element with ZNF domain
POLG polymerase (DNA directed), gamma
QSER1 glutamine and serine rich 1
RABGGTB Rab geranylgeranyltransferase, beta subunit
RAD9A RAD9 homolog A (S. pombe)
RBBP6 retinoblastoma binding protein 6
RMDN1 regulator of microtubule dynamics 1
RPF2 ribosome production factor 2 homolog (S. cerevisiae)
RPL26L1 ribosomal protein L26-like 1
RPUSD3 RNA pseudouridylate synthase domain containing 3
RSF1 remodeling and spacing factor 1
RSL24D1 ribosomal L24 domain containing 1
RTTN rotatin
RUFY3 RUN and FYVE domain containing 3
SACK1G scaffolding CK1 anchoring protein G
SCAMP1 secretory carrier membrane protein 1
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEC13 SEC13 homolog (S. cerevisiae)
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa
SNIP1 Smad nuclear interacting protein 1
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
SP1 Sp1 transcription factor
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae)
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TBL3 transducin (beta)-like 3
TCEAL4 transcription elongation factor A (SII)-like 4
TFB1M transcription factor B1, mitochondrial
THOC1 THO complex 1
THOC7 THO complex 7
THRAP3 thyroid hormone receptor associated protein 3
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast)
TMEM43 transmembrane protein 43
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TOP2B topoisomerase (DNA) II beta 180kDa
TRMT5 tRNA methyltransferase 5
UIMC1 ubiquitin interaction motif containing 1
VAMP7 vesicle-associated membrane protein 7
WDR46 WD repeat domain 46
WDR74 WD repeat domain 74
WDR75 WD repeat domain 75