COLO-320-HSR Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Colorectal Carcinoma Tumour (Cell Model Passports, SIDM00842)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00842
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Genes

198 proteins associated with the cell line COLO-320-HSR from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AK1 adenylate kinase 1
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
APOE apolipoprotein E
ARG2 arginase 2
ARGLU1 arginine and glutamate rich 1
ATG3 autophagy related 3
ATP2A3 ATPase, Ca++ transporting, ubiquitous
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BLMH bleomycin hydrolase
BOLA1 bolA family member 1
C11ORF58 chromosome 11 open reading frame 58
C20ORF27 chromosome 20 open reading frame 27
C9ORF40 chromosome 9 open reading frame 40
CASP2 caspase 2, apoptosis-related cysteine peptidase
CASP7 caspase 7, apoptosis-related cysteine peptidase
CDX2 caudal type homeobox 2
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CIAPIN1 cytokine induced apoptosis inhibitor 1
CLUH clustered mitochondria (cluA/CLU1) homolog
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CTBP2 C-terminal binding protein 2
DCUN1D5 DCN1, defective in cullin neddylation 1, domain containing 5
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7
EFCAB14 EF-hand calcium binding domain 14
ENSA endosulfine alpha
EPB41L2 erythrocyte membrane protein band 4.1-like 2
ESD esterase D
ESRP1 epithelial splicing regulatory protein 1
F5 coagulation factor V (proaccelerin, labile factor)
FKBP4 FK506 binding protein 4, 59kDa
FKBP7 FK506 binding protein 7
FRG1 FSHD region gene 1
GCA grancalcin, EF-hand calcium binding protein
GOLPH3L golgi phosphoprotein 3-like
GPC4 glypican 4
GPKOW G patch domain and KOW motifs
HEATR3 HEAT repeat containing 3
HEATR5B HEAT repeat containing 5B
HK2 hexokinase 2
HPRT1 hypoxanthine phosphoribosyltransferase 1
HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10
HSPA14 heat shock 70kDa protein 14
HSPH1 heat shock 105kDa/110kDa protein 1
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
INPP5F inositol polyphosphate-5-phosphatase F
IPO5 importin 5
IPO7 importin 7
IWS1 IWS1 homolog (S. cerevisiae)
KCP kielin/chordin-like protein
LARP4B La ribonucleoprotein domain family, member 4B
LGALSL lectin, galactoside-binding-like
LIMS1 LIM and senescent cell antigen-like domains 1
MCL1 myeloid cell leukemia 1
MPST mercaptopyruvate sulfurtransferase
NCAPD2 non-SMC condensin I complex, subunit D2
NMRK2 nicotinamide riboside kinase 2
OGT O-linked N-acetylglucosamine (GlcNAc) transferase
PFKM phosphofructokinase, muscle
PHF6 PHD finger protein 6
PLPP6 phospholipid phosphatase 6
PODXL2 podocalyxin-like 2
POLR1C polymerase (RNA) I polypeptide C, 30kDa
PPAT phosphoribosyl pyrophosphate amidotransferase
PPID peptidylprolyl isomerase D
PQBP1 polyglutamine binding protein 1
PRMT3 protein arginine methyltransferase 3
PRPF3 pre-mRNA processing factor 3
PRPF4 pre-mRNA processing factor 4
PRR12 proline rich 12
PSAT1 phosphoserine aminotransferase 1
PUS1 pseudouridylate synthase 1
REXO4 REX4, RNA exonuclease 4 homolog (S. cerevisiae)
RRM1 ribonucleotide reductase M1
SCML2 sex comb on midleg-like 2 (Drosophila)
SELENBP1 selenium binding protein 1
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1
SMC4 structural maintenance of chromosomes 4
STK38L serine/threonine kinase 38 like
STRN striatin, calmodulin binding protein
STXBP1 syntaxin binding protein 1
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TBC1D4 TBC1 domain family, member 4
TCEAL4 transcription elongation factor A (SII)-like 4
TECPR2 tectonin beta-propeller repeat containing 2
TMSB4Y thymosin beta 4, Y-linked
TSLIG3A tRNA splicing ligase complex subunit 3A
TTLL12 tubulin tyrosine ligase-like family member 12
UBE2O ubiquitin-conjugating enzyme E2O
UBXN7 UBX domain protein 7
UCK2 uridine-cytidine kinase 2
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
USP39 ubiquitin specific peptidase 39
USP7 ubiquitin specific peptidase 7 (herpes virus-associated)
VILL villin-like
VTN vitronectin
WDR77 WD repeat domain 77
YEATS4 YEATS domain containing 4

Symbol Name
ACADVL acyl-CoA dehydrogenase, very long chain
AHDC1 AT hook, DNA binding motif, containing 1
AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase
AP1S2 adaptor-related protein complex 1, sigma 2 subunit
AUH AU RNA binding protein/enoyl-CoA hydratase
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
BCKDK branched chain ketoacid dehydrogenase kinase
BCR breakpoint cluster region
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CAPN7 calpain 7
CDK5RAP3 CDK5 regulatory subunit associated protein 3
CENPC centromere protein C
CHIC2 cysteine-rich hydrophobic domain 2
CHMP4C charged multivesicular body protein 4C
CHPF chondroitin polymerizing factor
CNOT11 CCR4-NOT transcription complex, subunit 11
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CYBRD1 cytochrome b reductase 1
DAP death-associated protein
DARS2 aspartyl-tRNA synthetase 2, mitochondrial
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10
DNMBP dynamin binding protein
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERCC3 excision repair cross-complementation group 3
FAM184B family with sequence similarity 184, member B
FKBP11 FK506 binding protein 11, 19 kDa
FNDC3A fibronectin type III domain containing 3A
GALE UDP-galactose-4-epimerase
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5
GHITM growth hormone inducible transmembrane protein
GLMN glomulin, FKBP associated protein
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
HSPG2 heparan sulfate proteoglycan 2
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IDUA iduronidase, alpha-L-
INTS4 integrator complex subunit 4
KDSR 3-ketodihydrosphingosine reductase
KRT9 keratin 9, type I
LGALS1 lectin, galactoside-binding, soluble, 1
LMNA lamin A/C
LMO4 LIM domain only 4
LRRC37A5P leucine rich repeat containing 37, member A5, pseudogene
LRRC8D leucine rich repeat containing 8 family, member D
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene)
MET MET proto-oncogene, receptor tyrosine kinase
MRPL42 mitochondrial ribosomal protein L42
MRPL52 mitochondrial ribosomal protein L52
MZB1 marginal zone B and B1 cell-specific protein
NEBL nebulette
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NT5DC3 5'-nucleotidase domain containing 3
PALD1 phosphatase domain containing, paladin 1
PDIA5 protein disulfide isomerase family A, member 5
PDZD8 PDZ domain containing 8
PHF23 PHD finger protein 23
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PPOX protoporphyrinogen oxidase
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RPAP2 RNA polymerase II associated protein 2
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RTN4RL2 reticulon 4 receptor-like 2
SCAMP1 secretory carrier membrane protein 1
SDC1 syndecan 1
SFXN3 sideroflexin 3
SGPL1 sphingosine-1-phosphate lyase 1
SLC20A1 solute carrier family 20 (phosphate transporter), member 1
SLC38A10 solute carrier family 38, member 10
SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SP3 Sp3 transcription factor
SPAG7 sperm associated antigen 7
SQSTM1 sequestosome 1
SSX8 synovial sarcoma, X breakpoint 8
STIM2 stromal interaction molecule 2
STX3 syntaxin 3
SUN2 Sad1 and UNC84 domain containing 2
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast)
TKTL2 transketolase-like 2
TMED2 transmembrane emp24 domain trafficking protein 2
TMEM126A transmembrane protein 126A
TOR1AIP1 torsin A interacting protein 1
TRIP4 thyroid hormone receptor interactor 4
TRO trophinin
TRPM4 transient receptor potential cation channel, subfamily M, member 4
TRUB2 TruB pseudouridine (psi) synthase family member 2
UFL1 UFM1-specific ligase 1
WASF2 WAS protein family, member 2
WDPCP WD repeat containing planar cell polarity effector
YTHDC2 YTH domain containing 2
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZNF8 zinc finger protein 8
ZSWIM8 zinc finger, SWIM-type containing 8