COLO-668 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Metastasis (Cell Model Passports, SIDM00143)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00143
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Genes

198 proteins associated with the cell line COLO-668 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AACS acetoacetyl-CoA synthetase
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain
ACYP1 acylphosphatase 1, erythrocyte (common) type
AGA aspartylglucosaminidase
AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
AP1B1 adaptor-related protein complex 1, beta 1 subunit
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like
ATAD3A ATPase family, AAA domain containing 3A
ATG4B autophagy related 4B, cysteine peptidase
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BRI3BP BRI3 binding protein
CAMK2D calcium/calmodulin-dependent protein kinase II delta
CCDC59 coiled-coil domain containing 59
CDYL chromodomain protein, Y-like
CELF2 CUGBP, Elav-like family member 2
CENPC centromere protein C
CHGA chromogranin A
CISD2 CDGSH iron sulfur domain 2
CMIP c-Maf inducing protein
COG2 component of oligomeric golgi complex 2
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
COQ7 coenzyme Q7 homolog, ubiquinone (yeast)
COQ9 coenzyme Q9
CORO7 coronin 7
CPT2 carnitine palmitoyltransferase 2
DDAH1 dimethylarginine dimethylaminohydrolase 1
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase)
DENND2A DENN/MADD domain containing 2A
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
ENOPH1 enolase-phosphatase 1
FIP1L1 factor interacting with PAPOLA and CPSF1
GATB glutamyl-tRNA(Gln) amidotransferase, subunit B
GLUL glutamate-ammonia ligase
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GMDS GDP-mannose 4,6-dehydratase
GOLM1 golgi membrane protein 1
HADH hydroxyacyl-CoA dehydrogenase
HMGCL 3-hydroxymethyl-3-methylglutaryl-CoA lyase
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMGN2 high mobility group nucleosomal binding domain 2
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPR heterogeneous nuclear ribonucleoprotein R
HS2ST1 heparan sulfate 2-O-sulfotransferase 1
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSDL1 hydroxysteroid dehydrogenase like 1
KCTD12 potassium channel tetramerization domain containing 12
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1
LMTK2 lemur tyrosine kinase 2
LRBA LPS-responsive vesicle trafficking, beach and anchor containing
LYPLA2 lysophospholipase II
MGST2 microsomal glutathione S-transferase 2
MTFR1L mitochondrial fission regulator 1-like
NECTIN3 nectin cell adhesion molecule 3
NNT nicotinamide nucleotide transhydrogenase
NSF N-ethylmaleimide-sensitive factor
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
OSBP oxysterol binding protein
OSBP2 oxysterol binding protein 2
OXCT1 3-oxoacid CoA transferase 1
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PEF1 penta-EF-hand domain containing 1
PEX14 peroxisomal biogenesis factor 14
PPCS phosphopantothenoylcysteine synthetase
PRDX4 peroxiredoxin 4
QPCT glutaminyl-peptide cyclotransferase
RAB33B RAB33B, member RAS oncogene family
RAB3B RAB3B, member RAS oncogene family
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RHOT2 ras homolog family member T2
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RPAP1 RNA polymerase II associated protein 1
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
RTN3 reticulon 3
SAFB scaffold attachment factor B
SCARB2 scavenger receptor class B, member 2
SCIN scinderin
SCP2 sterol carrier protein 2
SFT2D3 SFT2 domain containing 3
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3
SMIM20 small integral membrane protein 20
SNIP1 Smad nuclear interacting protein 1
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
TFIP11 tuftelin interacting protein 11
THRAP3 thyroid hormone receptor associated protein 3
TMED5 transmembrane emp24 protein transport domain containing 5
TMX4 thioredoxin-related transmembrane protein 4
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase
TRIP13 thyroid hormone receptor interactor 13
TRIQK triple QxxK/R motif containing
TRIT1 tRNA isopentenyltransferase 1
TXNDC12 thioredoxin domain containing 12 (endoplasmic reticulum)
UBXN4 UBX domain protein 4
UGT8 UDP glycosyltransferase 8
XXYLT1 xyloside xylosyltransferase 1
ZMPSTE24 zinc metallopeptidase STE24

Symbol Name
ACOT9 acyl-CoA thioesterase 9
ALPPL2 alkaline phosphatase, placental-like 2
ANTXR2 anthrax toxin receptor 2
ANXA2 annexin A2
AP2A1 adaptor-related protein complex 2, alpha 1 subunit
APLP2 amyloid beta (A4) precursor-like protein 2
ARRB2 arrestin, beta 2
AVEN apoptosis, caspase activation inhibitor
BASP1 brain abundant, membrane attached signal protein 1
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1
C11ORF98 chromosome 11 open reading frame 98
C19ORF25 chromosome 19 open reading frame 25
C1ORF127 chromosome 1 open reading frame 127
CCNA2 cyclin A2
CD44 CD44 molecule (Indian blood group)
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CPNE2 copine II
CTTNBP2NL CTTNBP2 N-terminal like
DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
DDX54 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
ERGIC2 ERGIC and golgi 2
FAM114A2 family with sequence similarity 114, member A2
FAM172A family with sequence similarity 172, member A
FHL2 four and a half LIM domains 2
FKBP10 FK506 binding protein 10, 65 kDa
FXR1 fragile X mental retardation, autosomal homolog 1
GEMIN6 gem (nuclear organelle) associated protein 6
GPX1 glutathione peroxidase 1
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa
HCLS1 hematopoietic cell-specific Lyn substrate 1
HOOK3 hook microtubule-tethering protein 3
IFI30 interferon, gamma-inducible protein 30
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITM2C integral membrane protein 2C
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2
KANK4 KN motif and ankyrin repeat domains 4
KEAP1 kelch-like ECH-associated protein 1
KIF3A kinesin family member 3A
LENG9 leukocyte receptor cluster (LRC) member 9
MAOB monoamine oxidase B
MAT2B methionine adenosyltransferase II, beta
METTL1 methyltransferase like 1
MEX3A mex-3 RNA binding family member A
MGARP mitochondria-localized glutamic acid-rich protein
MGMT O-6-methylguanine-DNA methyltransferase
MIB1 mindbomb E3 ubiquitin protein ligase 1
MYH9 myosin, heavy chain 9, non-muscle
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
NOP53 NOP53 ribosome biogenesis factor
NR2C2AP nuclear receptor 2C2-associated protein
NTM neurotrimin
OSBPL11 oxysterol binding protein-like 11
OVCA2 ovarian tumor suppressor candidate 2
PALLD palladin, cytoskeletal associated protein
PEPD peptidase D
PHAX phosphorylated adaptor for RNA export
PHRF1 PHD and ring finger domains 1
PLIN3 perilipin 3
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
PPM1E protein phosphatase, Mg2+/Mn2+ dependent, 1E
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PRDM15 PR domain containing 15
PRR11 proline rich 11
PRX periaxin
RAD51AP1 RAD51 associated protein 1
RHOC ras homolog family member C
RMDN1 regulator of microtubule dynamics 1
RMI1 RecQ mediated genome instability 1
RPF1 ribosome production factor 1 homolog (S. cerevisiae)
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
SEZ6L seizure related 6 homolog (mouse)-like
SFSWAP splicing factor, suppressor of white-apricot family
SLC25A19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SNORA49 small nucleolar RNA, H/ACA box 49
SP100 SP100 nuclear antigen
SYNE1 spectrin repeat containing, nuclear envelope 1
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TCAF1 TRPM8 channel-associated factor 1
TCOF1 Treacher Collins-Franceschetti syndrome 1
TJP3 tight junction protein 3
TLK2 tousled-like kinase 2
TMEM63A transmembrane protein 63A
TPM4 tropomyosin 4
UBXN7 UBX domain protein 7
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
UROS uroporphyrinogen III synthase
USF2 upstream transcription factor 2, c-fos interacting
WDR74 WD repeat domain 74
WDR91 WD repeat domain 91
YIPF5 Yip1 domain family, member 5
ZNF385A zinc finger protein 385A
ZNHIT2 zinc finger, HIT-type containing 2