COLO-679 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Tumour (Cell Model Passports, SIDM00284)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00284
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Genes

196 proteins associated with the cell line COLO-679 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACAD11 acyl-CoA dehydrogenase family, member 11
ACO2 aconitase 2, mitochondrial
ACSL1 acyl-CoA synthetase long-chain family member 1
AGK acylglycerol kinase
ANK2 ankyrin 2, neuronal
ANXA5 annexin A5
ARMC9 armadillo repeat containing 9
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATN1 atrophin 1
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
ATP6V1E1 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
BCL2L13 BCL2-like 13 (apoptosis facilitator)
CAB39L calcium binding protein 39-like
CDH26 cadherin 26
CDK2 cyclin-dependent kinase 2
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COMT catechol-O-methyltransferase
CTSA cathepsin A
DESI1 desumoylating isopeptidase 1
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30
EIF1B eukaryotic translation initiation factor 1B
ESRRB estrogen-related receptor beta
FABP3 fatty acid binding protein 3, muscle and heart
FASN fatty acid synthase
FASTKD2 FAST kinase domains 2
FUCA1 fucosidase, alpha-L- 1, tissue
G3BP2 GTPase activating protein (SH3 domain) binding protein 2
GDF15 growth differentiation factor 15
GFM1 G elongation factor, mitochondrial 1
GOT1 glutamic-oxaloacetic transaminase 1, soluble
GPR143 G protein-coupled receptor 143
GSN gelsolin
GSTO1 glutathione S-transferase omega 1
HABP4 hyaluronan binding protein 4
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HEXA hexosaminidase A (alpha polypeptide)
HSP90AA4P heat shock protein 90kDa alpha (cytosolic), class A member 4, pseudogene
IDH3B isocitrate dehydrogenase 3 (NAD+) beta
INTS3 integrator complex subunit 3
KIF23 kinesin family member 23
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LGALS3 lectin, galactoside-binding, soluble, 3
MAN1A1 mannosidase, alpha, class 1A, member 1
MAPK1 mitogen-activated protein kinase 1
MCAM melanoma cell adhesion molecule
MED15 mediator complex subunit 15
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MSH3 mutS homolog 3
MYH10 myosin, heavy chain 10, non-muscle
NES nestin
NEU1 sialidase 1 (lysosomal sialidase)
NIT2 nitrilase family, member 2
NOAZFP nucleolar atypical zinc finger
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae)
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PEPD peptidase D
PHLDB1 pleckstrin homology-like domain, family B, member 1
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLIN2 perilipin 2
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PPP1R12BP1 protein phosphatase 1, regulatory subunit 12B pseudogene, Y-linked 1
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta
PYGB phosphorylase, glycogen; brain
PYM1 PYM homolog 1, exon junction complex associated factor
QDPR quinoid dihydropteridine reductase
RAB32 RAB32, member RAS oncogene family
RNA5SP229 RNA, 5S ribosomal pseudogene 229
RPL27 ribosomal protein L27
RPL34 ribosomal protein L34
SCIN scinderin
SFT2D2 SFT2 domain containing 2
SNAP29 synaptosomal-associated protein, 29kDa
SND1 staphylococcal nuclease and tudor domain containing 1
STARD3NL STARD3 N-terminal like
STX7 syntaxin 7
STXBP1 syntaxin binding protein 1
TACO1 translational activator of mitochondrially encoded cytochrome c oxidase I
THEM4 thioesterase superfamily member 4
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TMX2 thioredoxin-related transmembrane protein 2
TMX4 thioredoxin-related transmembrane protein 4
TPRN taperin
TRIP12 thyroid hormone receptor interactor 12
VAT1 vesicle amine transport 1
WDFY1 WD repeat and FYVE domain containing 1
WDR91 WD repeat domain 91
ZC3H6 zinc finger CCCH-type containing 6

Symbol Name
ABI1 abl-interactor 1
ACIN1 apoptotic chromatin condensation inducer 1
ACSL5 acyl-CoA synthetase long-chain family member 5
ADGB androglobin
AGTPBP1 ATP/GTP binding protein 1
AHCYL2 adenosylhomocysteinase-like 2
AKAP17A A kinase (PRKA) anchor protein 17A
ANAPC16 anaphase promoting complex subunit 16
APP amyloid beta (A4) precursor protein
ARHGAP21 Rho GTPase activating protein 21
ARHGAP5 Rho GTPase activating protein 5
C1ORF131 chromosome 1 open reading frame 131
C9ORF40 chromosome 9 open reading frame 40
CDCA3 cell division cycle associated 3
CEP350 centrosomal protein 350kDa
CEP44 centrosomal protein 44kDa
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHERP calcium homeostasis endoplasmic reticulum protein
CPT1A carnitine palmitoyltransferase 1A (liver)
CRACR2B calcium release activated channel regulator 2B
CRIP2 cysteine-rich protein 2
CROCC ciliary rootlet coiled-coil, rootletin
CWC15 CWC15 spliceosome-associated protein
CXCR4 chemokine (C-X-C motif) receptor 4
DGKZ diacylglycerol kinase, zeta
DHRS13 dehydrogenase/reductase (SDR family) member 13
DPY30 dpy-30 homolog (C. elegans)
EHMT2 euchromatic histone-lysine N-methyltransferase 2
EMC9 ER membrane protein complex subunit 9
ERI1 exoribonuclease 1
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit
FAM89A family with sequence similarity 89, member A
FILIP1 filamin A interacting protein 1
GAMT guanidinoacetate N-methyltransferase
GEMIN6 gem (nuclear organelle) associated protein 6
GGT7 gamma-glutamyltransferase 7
GINS2 GINS complex subunit 2 (Psf2 homolog)
HID1 HID1 domain containing
HINT3 histidine triad nucleotide binding protein 3
HIPK2 homeodomain interacting protein kinase 2
HMBOX1 homeobox containing 1
HOXB1 homeobox B1
HSCB HscB mitochondrial iron-sulfur cluster co-chaperone
INTS7 integrator complex subunit 7
IQCA1 IQ motif containing with AAA domain 1
KIF20A kinesin family member 20A
KRT75 keratin 75, type II
LAD1 ladinin 1
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LMNB1 lamin B1
MAP7 microtubule-associated protein 7
MED23 mediator complex subunit 23
MORC2 MORC family CW-type zinc finger 2
NELFA negative elongation factor complex member A
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NIPBL Nipped-B homolog (Drosophila)
NOP10 NOP10 ribonucleoprotein
NUMA1 nuclear mitotic apparatus protein 1
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
ORC1 origin recognition complex, subunit 1
PDZD8 PDZ domain containing 8
PNP purine nucleoside phosphorylase
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3
RBM17 RNA binding motif protein 17
RCOR1 REST corepressor 1
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
RPP14 ribonuclease P/MRP 14kDa subunit
RPS6KB2 ribosomal protein S6 kinase, 70kDa, polypeptide 2
RREB1 ras responsive element binding protein 1
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7
SLC23A3 solute carrier family 23, member 3
SLC25A10 solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10
SLTM SAFB-like, transcription modulator
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SPAG7 sperm associated antigen 7
SRBD1 S1 RNA binding domain 1
STX10 syntaxin 10
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TIMP3 TIMP metallopeptidase inhibitor 3
TMOD3 tropomodulin 3 (ubiquitous)
TRIM22 tripartite motif containing 22
TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
TRRAP transformation/transcription domain-associated protein
TSPAN13 tetraspanin 13
TTTY16 testis-specific transcript, Y-linked 16 (non-protein coding)
TUBA4A tubulin, alpha 4a
TYK2 tyrosine kinase 2
U2SURP U2 snRNP-associated SURP domain containing
UBN2 ubinuclein 2
UBR5 ubiquitin protein ligase E3 component n-recognin 5
UIMC1 ubiquitin interaction motif containing 1
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
ZCCHC8 zinc finger, CCHC domain containing 8
ZWINT ZW10 interacting kinetochore protein