COLO-680N Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Esophageal Squamous Cell Carcinoma Tumour (Cell Model Passports, SIDM00956)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00956
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Genes

195 proteins associated with the cell line COLO-680N from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AK3 adenylate kinase 3
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
BOLA1 bolA family member 1
BRD2 bromodomain containing 2
C1QBP complement component 1, q subcomponent binding protein
CANT1 calcium activated nucleotidase 1
CAPN1 calpain 1, (mu/I) large subunit
CCDC33 coiled-coil domain containing 33
CENPQ centromere protein Q
CLIP1 CAP-GLY domain containing linker protein 1
CUTC cutC copper transporter
DCP1A decapping mRNA 1A
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila)
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21
DPYSL5 dihydropyrimidinase-like 5
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
ECH1 enoyl CoA hydratase 1, peroxisomal
FAM114A2 family with sequence similarity 114, member A2
FBLL1 fibrillarin-like 1
FRRS1 ferric-chelate reductase 1
FYTTD1 forty-two-three domain containing 1
GALNS galactosamine (N-acetyl)-6-sulfatase
GFM1 G elongation factor, mitochondrial 1
GFM2 G elongation factor, mitochondrial 2
GOLGA5 golgin A5
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial
GRSF1 G-rich RNA sequence binding factor 1
HGFAC HGF activator
HM13 histocompatibility (minor) 13
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IFT74 intraflagellar transport 74
INF2 inverted formin, FH2 and WH2 domain containing
INTS7 integrator complex subunit 7
ITCH itchy E3 ubiquitin protein ligase
KDM2A lysine (K)-specific demethylase 2A
KPNA4 karyopherin alpha 4 (importin alpha 3)
KRT75 keratin 75, type II
L1RE1 LINE1 retrotransposable element 1
L1TD1 LINE-1 type transposase domain containing 1
LYPLAL1 lysophospholipase-like 1
MAN2A1 mannosidase, alpha, class 2A, member 1
MED29 mediator complex subunit 29
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MRPL57 mitochondrial ribosomal protein L57
MYL4 myosin, light chain 4, alkali; atrial, embryonic
NEFH neurofilament, heavy polypeptide
NEK5 NIMA-related kinase 5
NR4A2 nuclear receptor subfamily 4, group A, member 2
OSBPL8 oxysterol binding protein-like 8
PLA2G15 phospholipase A2, group XV
POFUT1 protein O-fucosyltransferase 1
POLG polymerase (DNA directed), gamma
POMT2 protein-O-mannosyltransferase 2
PPIG peptidylprolyl isomerase G (cyclophilin G)
PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
PRR11 proline rich 11
RAB1B RAB1B, member RAS oncogene family
RAB30 RAB30, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAB6A RAB6A, member RAS oncogene family
RBM4 RNA binding motif protein 4
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RHOD ras homolog family member D
RMDN1 regulator of microtubule dynamics 1
SDC4 syndecan 4
SH3PXD2B SH3 and PX domains 2B
SNF8 SNF8, ESCRT-II complex subunit
STOML2 stomatin (EPB72)-like 2
SUGP1 SURP and G patch domain containing 1
SUN5 Sad1 and UNC84 domain containing 5
TBC1D4 TBC1 domain family, member 4
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4)
TFRC transferrin receptor
THOC2 THO complex 2
TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast)
TMED3 transmembrane emp24 protein transport domain containing 3
TMEM123 transmembrane protein 123
TMEM126A transmembrane protein 126A
TMLHE trimethyllysine hydroxylase, epsilon
TMX1 thioredoxin-related transmembrane protein 1
TRIM27 tripartite motif containing 27
TRMT6 tRNA methyltransferase 6
UGGT1 UDP-glucose glycoprotein glucosyltransferase 1
UROS uroporphyrinogen III synthase
USF2 upstream transcription factor 2, c-fos interacting
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
VN1R110P vomeronasal 1 receptor 110 pseudogene
WDR33 WD repeat domain 33
WIPF2 WAS/WASL interacting protein family, member 2
ZFR zinc finger RNA binding protein
ZNF148 zinc finger protein 148

Symbol Name
ACTG1P22 actin gamma 1 pseudogene 22
AKR1E2 aldo-keto reductase family 1, member E2
AKT1S1 AKT1 substrate 1 (proline-rich)
AMPD2 adenosine monophosphate deaminase 2
AP3S1 adaptor-related protein complex 3, sigma 1 subunit
ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1
ASF1A anti-silencing function 1A histone chaperone
ATP2A3 ATPase, Ca++ transporting, ubiquitous
BAX BCL2-associated X protein
BCAP29 B-cell receptor-associated protein 29
BET1L Bet1 golgi vesicular membrane trafficking protein-like
BIN1 bridging integrator 1
BRCC3 BRCA1/BRCA2-containing complex, subunit 3
C19ORF53 chromosome 19 open reading frame 53
C5ORF15 chromosome 5 open reading frame 15
CDC20 cell division cycle 20
CDK5R2 cyclin-dependent kinase 5, regulatory subunit 2 (p39)
CEP104 centrosomal protein 104kDa
CLIP2 CAP-GLY domain containing linker protein 2
CNOT2 CCR4-NOT transcription complex, subunit 2
COL5A2 collagen, type V, alpha 2
COMMD2 COMM domain containing 2
COMMD9 COMM domain containing 9
COQ6 coenzyme Q6 monooxygenase
CPNE2 copine II
CRACR2B calcium release activated channel regulator 2B
DCTN4 dynactin 4 (p62)
DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30
EXOSC8 exosome component 8
FABP5 fatty acid binding protein 5 (psoriasis-associated)
FAIM Fas apoptotic inhibitory molecule
FAM193B family with sequence similarity 193, member B
FANCD2 Fanconi anemia, complementation group D2
FGF2 fibroblast growth factor 2 (basic)
FHL1 four and a half LIM domains 1
FILIP1 filamin A interacting protein 1
FNBP4 formin binding protein 4
GBE1 glucan (1,4-alpha-), branching enzyme 1
GINS1 GINS complex subunit 1 (Psf1 homolog)
GOLIM4 golgi integral membrane protein 4
H1-1 H1.1 linker histone, cluster member
HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
IGSF8 immunoglobulin superfamily, member 8
KIF14 kinesin family member 14
KLC1 kinesin light chain 1
KPNA1 karyopherin alpha 1 (importin alpha 5)
LMNB1 lamin B1
LOC100422168 olfactory receptor, family 4, subfamily C, member 46 pseudogene
LOC100653005
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
LYRM7 LYR motif containing 7
MAFA v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A
MAGED2 melanoma antigen family D2
MCEE methylmalonyl CoA epimerase
MCRIP2 MAPK regulated corepressor interacting protein 2
MED1 mediator complex subunit 1
MVD mevalonate (diphospho) decarboxylase
NBAS neuroblastoma amplified sequence
NELFA negative elongation factor complex member A
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain)
NSD1 nuclear receptor binding SET domain protein 1
NSL1 NSL1, MIS12 kinetochore complex component
NUF2 NUF2, NDC80 kinetochore complex component
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OXSM 3-oxoacyl-ACP synthase, mitochondrial
PARP4 poly (ADP-ribose) polymerase family, member 4
PKN1 protein kinase N1
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR1B polymerase (RNA) I polypeptide B, 128kDa
POP7 processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
PPAT phosphoribosyl pyrophosphate amidotransferase
PPID peptidylprolyl isomerase D
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PPP1R8 protein phosphatase 1, regulatory subunit 8
PPP2R5D protein phosphatase 2, regulatory subunit B', delta
PSMG4 proteasome (prosome, macropain) assembly chaperone 4
PWWP2A PWWP domain containing 2A
RANBP6 RAN binding protein 6
RFC3 replication factor C (activator 1) 3, 38kDa
RPE ribulose-5-phosphate-3-epimerase
RPP25 ribonuclease P/MRP 25kDa subunit
RPUSD2 RNA pseudouridylate synthase domain containing 2
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMC6 structural maintenance of chromosomes 6
STRBP spermatid perinuclear RNA binding protein
STXBP1 syntaxin binding protein 1
SYAP1 synapse associated protein 1
THUMPD1 THUMP domain containing 1
TOE1 target of EGR1, member 1 (nuclear)
TRMT61B tRNA methyltransferase 61B
TYMS thymidylate synthetase
UCP1 uncoupling protein 1 (mitochondrial, proton carrier)
UIMC1 ubiquitin interaction motif containing 1
XPOT exportin, tRNA
YBX2 Y box binding protein 2
ZBED9 zinc finger, BED-type containing 9
ZNF384 zinc finger protein 384