COLO-741 Gene Set
Genes
42 genes with high or low copy number in COLO-741 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
MYLIP
|
myosin regulatory light chain interacting protein
|
2.93899
|
|
MIR4639
|
microRNA 4639
|
2.93899
|
|
EEF1E1
|
eukaryotic translation elongation factor 1 epsilon 1
|
2.93899
|
|
SCARNA27
|
small Cajal body-specific RNA 27
|
2.93899
|
|
ATXN1
|
ataxin 1
|
2.76305
|
|
NHLRC1
|
NHL repeat containing E3 ubiquitin protein ligase 1
|
2.76305
|
|
KDM1B
|
lysine (K)-specific demethylase 1B
|
2.76305
|
|
DEK
|
DEK proto-oncogene
|
2.76305
|
|
MIR548A1
|
microRNA 548a-1
|
2.76305
|
|
RNF144B
|
ring finger protein 144B
|
2.76305
|
|
TPMT
|
thiopurine S-methyltransferase
|
2.76305
|
|
GMPR
|
guanosine monophosphate reductase
|
2.76305
|
|
RNF182
|
ring finger protein 182
|
2.64759
|
|
HULC
|
hepatocellular carcinoma up-regulated long non-coding RNA
|
2.64759
|
|
NOL7
|
nucleolar protein 7, 27kDa
|
2.64759
|
|
SIRT5
|
sirtuin 5
|
2.64759
|
|
RANBP9
|
RAN binding protein 9
|
2.64759
|
|
MCUR1
|
mitochondrial calcium uniporter regulator 1
|
2.64759
|
|
SLC35B3
|
solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
|
2.64759
|
|
RBM24
|
RNA binding motif protein 24
|
2.64759
|
|
NUP153
|
nucleoporin 153kDa
|
2.64759
|
|
FAM8A1
|
family with sequence similarity 8, member A1
|
2.64759
|
|
STMND1
|
stathmin domain containing 1
|
2.64759
|
|
CD83
|
CD83 molecule
|
2.64759
|
|
LOC100506207
|
uncharacterized LOC100506207
|
2.64759
|
|
CAP2
|
CAP, adenylate cyclase-associated protein, 2 (yeast)
|
2.64759
|
|
KIF13A
|
kinesin family member 13A
|
2.64759
|
|
PRL
|
prolactin
|
2.59653
|
|
HDGFL1
|
hepatoma derived growth factor-like 1
|
2.59653
|
|
ID4
|
inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
|
2.59653
|
|
JARID2
|
jumonji, AT rich interactive domain 2
|
2.10177
|
|
DTNBP1
|
dystrobrevin binding protein 1
|
2.10038
|
low copy number
| Symbol |
Name |
Standardized Value |
|
PABPC4L
|
poly(A) binding protein, cytoplasmic 4-like
|
-5.12655
|
|
IQGAP2
|
IQ motif containing GTPase activating protein 2
|
-5.12655
|
|
FOXO3
|
forkhead box O3
|
-3.11641
|
|
LACE1
|
lactation elevated 1
|
-3.11641
|
|
SNX3
|
sorting nexin 3
|
-3.05196
|
|
EGOT
|
eosinophil granule ontogeny transcript (non-protein coding)
|
-3.03082
|
|
ITPR1
|
inositol 1,4,5-trisphosphate receptor, type 1
|
-3.03082
|
|
UGT2B15
|
UDP glucuronosyltransferase 2 family, polypeptide B15
|
-2.87269
|
|
PDE4D
|
phosphodiesterase 4D, cAMP-specific
|
-2.83605
|
|
FFAR3
|
free fatty acid receptor 3
|
-2.76158
|
