COLO-792 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Metastasis (Cell Model Passports, SIDM00140)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00140
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Genes

195 proteins associated with the cell line COLO-792 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACY1 aminoacylase 1
AGRN agrin
AIF1L allograft inflammatory factor 1-like
APOE apolipoprotein E
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
BYSL bystin-like
CCDC43 coiled-coil domain containing 43
CD63 CD63 molecule
CDK2 cyclin-dependent kinase 2
CIT citron rho-interacting serine/threonine kinase
CLCN7 chloride channel, voltage-sensitive 7
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
DDB2 damage-specific DNA binding protein 2, 48kDa
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14
DOCK9 dedicator of cytokinesis 9
DUSP3 dual specificity phosphatase 3
EDEM3 ER degradation enhancer, mannosidase alpha-like 3
EHD2 EH-domain containing 2
EXOC3 exocyst complex component 3
GCLC glutamate-cysteine ligase, catalytic subunit
GIPC1 GIPC PDZ domain containing family, member 1
GLMP glycosylated lysosomal membrane protein
GLTP glycolipid transfer protein
GNPAT glyceronephosphate O-acyltransferase
GNPDA1 glucosamine-6-phosphate deaminase 1
GSN gelsolin
HEXA hexosaminidase A (alpha polypeptide)
HGS hepatocyte growth factor-regulated tyrosine kinase substrate
HIP1R huntingtin interacting protein 1 related
HMG20B high mobility group 20B
IGSF3 immunoglobulin superfamily, member 3
IGSF8 immunoglobulin superfamily, member 8
ILVBL ilvB (bacterial acetolactate synthase)-like
INTS9 integrator complex subunit 9
IQGAP2 IQ motif containing GTPase activating protein 2
IQGAP3 IQ motif containing GTPase activating protein 3
KIF23 kinesin family member 23
LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
LAMTOR4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
LIMD1 LIM domains containing 1
LOC105371637 uncharacterized LOC105371637
LONP2 lon peptidase 2, peroxisomal
LZTS1 leucine zipper, putative tumor suppressor 1
M6PR mannose-6-phosphate receptor (cation dependent)
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
MED17 mediator complex subunit 17
MRPL53 mitochondrial ribosomal protein L53
MYO5A myosin VA (heavy chain 12, myoxin)
NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma
NCLN nicalin
NCOR2 nuclear receptor corepressor 2
NEU1 sialidase 1 (lysosomal sialidase)
NISCH nischarin
NUP85 nucleoporin 85kDa
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PLEKHO2 pleckstrin homology domain containing, family O member 2
POSTN periostin, osteoblast specific factor
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP1R12BP1 protein phosphatase 1, regulatory subunit 12B pseudogene, Y-linked 1
PTDSS2 phosphatidylserine synthase 2
PTPN23 protein tyrosine phosphatase, non-receptor type 23
PYCARD PYD and CARD domain containing
PYGB phosphorylase, glycogen; brain
RAB38 RAB38, member RAS oncogene family
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RING1 ring finger protein 1
RPTOR regulatory associated protein of MTOR, complex 1
RTN4IP1 reticulon 4 interacting protein 1
SCARB1 scavenger receptor class B, member 1
SLC27A4 solute carrier family 27 (fatty acid transporter), member 4
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNUPN snurportin 1
SORT1 sortilin 1
STOM stomatin
STXBP1 syntaxin binding protein 1
SYNM synemin, intermediate filament protein
TIMELESS timeless circadian clock
TKT transketolase
TMEM192 transmembrane protein 192
TMEM199 transmembrane protein 199
TOLLIP toll interacting protein
TRAF2 TNF receptor-associated factor 2
TRIM2 tripartite motif containing 2
TYR tyrosinase
UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1
UHRF1BP1 UHRF1 binding protein 1
USF2 upstream transcription factor 2, c-fos interacting
VAT1 vesicle amine transport 1
WDFY1 WD repeat and FYVE domain containing 1
WDR91 WD repeat domain 91
ZADH2 zinc binding alcohol dehydrogenase domain containing 2
ZC3H7A zinc finger CCCH-type containing 7A
ZFP91 ZFP91 zinc finger protein

Symbol Name
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
ALDH16A1 aldehyde dehydrogenase 16 family, member A1
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
APOB apolipoprotein B
ARID3B AT rich interactive domain 3B (BRIGHT-like)
ARL3 ADP-ribosylation factor-like 3
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
ATG2A autophagy related 2A
BCLAF1 BCL2-associated transcription factor 1
C1ORF122 chromosome 1 open reading frame 122
CAB39 calcium binding protein 39
CABP7 calcium binding protein 7
CASP7 caspase 7, apoptosis-related cysteine peptidase
CCDC73 coiled-coil domain containing 73
CCSER1 coiled-coil serine-rich protein 1
CDC73 cell division cycle 73
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CHAF1A chromatin assembly factor 1, subunit A (p150)
CHD1L chromodomain helicase DNA binding protein 1-like
CHEK1 checkpoint kinase 1
CIC capicua transcriptional repressor
CNRIP1 cannabinoid receptor interacting protein 1
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
DBR1 debranching RNA lariats 1
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
FAM171A2 family with sequence similarity 171, member A2
GMPR2 guanosine monophosphate reductase 2
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1
HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HPS5 Hermansky-Pudlak syndrome 5
HSPG2 heparan sulfate proteoglycan 2
INTS1 integrator complex subunit 1
IPO4 importin 4
KHK ketohexokinase (fructokinase)
LBR lamin B receptor
LYPLAL1 lysophospholipase-like 1
MAP2K1 mitogen-activated protein kinase kinase 1
MIA2 melanoma inhibitory activity 2
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NCAPD2 non-SMC condensin I complex, subunit D2
NCAPD3 non-SMC condensin II complex, subunit D3
NMI N-myc (and STAT) interactor
NUDCD3 NudC domain containing 3
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PCBP3 poly(rC) binding protein 3
PCNT pericentrin
PDCD2L programmed cell death 2-like
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PPA2 pyrophosphatase (inorganic) 2
PPIG peptidylprolyl isomerase G (cyclophilin G)
PPP1R8 protein phosphatase 1, regulatory subunit 8
PPP2R5D protein phosphatase 2, regulatory subunit B', delta
PRKRIP1 PRKR interacting protein 1 (IL11 inducible)
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
PSMG1 proteasome (prosome, macropain) assembly chaperone 1
PTBP1 polypyrimidine tract binding protein 1
RAB10 RAB10, member RAS oncogene family
RAB31 RAB31, member RAS oncogene family
RABGGTB Rab geranylgeranyltransferase, beta subunit
RALA v-ral simian leukemia viral oncogene homolog A (ras related)
RBM15 RNA binding motif protein 15
RBM25 RNA binding motif protein 25
RFC2 replication factor C (activator 1) 2, 40kDa
SCARF2 scavenger receptor class F, member 2
SEC24A SEC24 family member A
SF3A3 splicing factor 3a, subunit 3, 60kDa
SMPD4 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
SMTN smoothelin
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNU13 small nuclear ribonucleoprotein 13
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
STRBP spermatid perinuclear RNA binding protein
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
TCEAL4 transcription elongation factor A (SII)-like 4
TERF2 telomeric repeat binding factor 2
TFB1M transcription factor B1, mitochondrial
TMCC3 transmembrane and coiled-coil domain family 3
TOP1 topoisomerase (DNA) I
TPRN taperin
TSC22D3 TSC22 domain family, member 3
U2AF2 U2 small nuclear RNA auxiliary factor 2
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast)
VAT1L vesicle amine transport 1-like
VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1
XPO5 exportin 5
XPO7 exportin 7
YIPF5 Yip1 domain family, member 5
ZBTB32 zinc finger and BTB domain containing 32
ZW10 zw10 kinetochore protein