COLO-800 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Tumour (Cell Model Passports, SIDM00515)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00515
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Genes

200 proteins associated with the cell line COLO-800 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD16A abhydrolase domain containing 16A
AKAP12 A kinase (PRKA) anchor protein 12
ALDH1A3 aldehyde dehydrogenase 1 family, member A3
ANXA5 annexin A5
AQR aquarius intron-binding spliceosomal factor
ARFIP1 ADP-ribosylation factor interacting protein 1
ARMCX4 armadillo repeat containing, X-linked 4
ARPP19 cAMP-regulated phosphoprotein, 19kDa
ATOX1 antioxidant 1 copper chaperone
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
CCDC175 coiled-coil domain containing 175
CCDC43 coiled-coil domain containing 43
CENPQ centromere protein Q
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COG8 component of oligomeric golgi complex 8
COL10A1 collagen, type X, alpha 1
CRYL1 crystallin, lambda 1
CSPG4 chondroitin sulfate proteoglycan 4
DBR1 debranching RNA lariats 1
DENND5B DENN/MADD domain containing 5B
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
DUSP12 dual specificity phosphatase 12
EML3 echinoderm microtubule associated protein like 3
FILIP1L filamin A interacting protein 1-like
FKBP7 FK506 binding protein 7
FRA1D fragile site, aphidicolin type, common, fra(1)(p22)
GEMIN6 gem (nuclear organelle) associated protein 6
GLA galactosidase, alpha
GPNMB glycoprotein (transmembrane) nmb
GSN gelsolin
HAX1 HCLS1 associated protein X-1
HEXA hexosaminidase A (alpha polypeptide)
KBTBD2 kelch repeat and BTB (POZ) domain containing 2
KIF23 kinesin family member 23
KLC2 kinesin light chain 2
LAS1L LAS1-like (S. cerevisiae)
LOC105373961 uncharacterized LOC105373961
LOC105378547 uncharacterized LOC105378547
LRRC34 leucine rich repeat containing 34
MAGED2 melanoma antigen family D2
MCAM melanoma cell adhesion molecule
MED21 mediator complex subunit 21
MMP15 matrix metallopeptidase 15 (membrane-inserted)
MON2 MON2 homolog (S. cerevisiae)
MOSPD2 motile sperm domain containing 2
MRPL37 mitochondrial ribosomal protein L37
MRPS18A mitochondrial ribosomal protein S18A
MRPS5 mitochondrial ribosomal protein S5
MTPAP mitochondrial poly(A) polymerase
MVD mevalonate (diphospho) decarboxylase
MYH10 myosin, heavy chain 10, non-muscle
NCAPH2 non-SMC condensin II complex, subunit H2
NEK5 NIMA-related kinase 5
NGFR nerve growth factor receptor
NSL1 NSL1, MIS12 kinetochore complex component
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
NVL nuclear VCP-like
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PEA15 phosphoprotein enriched in astrocytes 15
PER1 period circadian clock 1
PER3 period circadian clock 3
PLXNA1 plexin A1
PPP1R10 protein phosphatase 1, regulatory subunit 10
PRIM2 primase, DNA, polypeptide 2 (58kDa)
PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
PSME4 proteasome (prosome, macropain) activator subunit 4
RAB33B RAB33B, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RILPL1 Rab interacting lysosomal protein-like 1
RNF7 ring finger protein 7
RPE ribulose-5-phosphate-3-epimerase
RPUSD3 RNA pseudouridylate synthase domain containing 3
S100A13 S100 calcium binding protein A13
SDE2 SDE2 telomere maintenance homolog (S. pombe)
SEC63 SEC63 homolog (S. cerevisiae)
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SIRAL1 SIR2 antiphage like 1
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SMPD4 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome)
SURF4 surfeit 4
SYNM synemin, intermediate filament protein
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TCAF1 TRPM8 channel-associated factor 1
TFG TRK-fused gene
TRHDE thyrotropin-releasing hormone degrading enzyme
UBA5 ubiquitin-like modifier activating enzyme 5
UNC119B unc-119 homolog B (C. elegans)
VAT1 vesicle amine transport 1
VIS1 viral integration site 1
WDR27 WD repeat domain 27
WDR74 WD repeat domain 74
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing
ZNF566 zinc finger protein 566

Symbol Name
ALYREF Aly/REF export factor
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ASPA aspartoacylase
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BAZ1A bromodomain adjacent to zinc finger domain, 1A
C18ORF63 chromosome 18 open reading frame 63
C5ORF24 chromosome 5 open reading frame 24
CD320 CD320 molecule
CDKN2AIP CDKN2A interacting protein
CFDP1 craniofacial development protein 1
CIC capicua transcriptional repressor
CIP2A cellular inhibitor of PP2A
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit
CPNE2 copine II
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CRYZL1 crystallin, zeta (quinone reductase)-like 1
CSNK2A2 casein kinase 2, alpha prime polypeptide
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae)
DAZAP1 DAZ associated protein 1
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DKC1 dyskeratosis congenita 1, dyskerin
ECI1 enoyl-CoA delta isomerase 1
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1
FOXRED1 FAD-dependent oxidoreductase domain containing 1
GPKOW G patch domain and KOW motifs
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPL heterogeneous nuclear ribonucleoprotein L
INTS7 integrator complex subunit 7
ITGA11 integrin, alpha 11
KCTD1 potassium channel tetramerization domain containing 1
KCTD5 potassium channel tetramerization domain containing 5
KIF20A kinesin family member 20A
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LEMD3 LEM domain containing 3
LOC105371745 uncharacterized LOC105371745
MPC2 mitochondrial pyruvate carrier 2
MPI mannose phosphate isomerase
MRPL1 mitochondrial ribosomal protein L1
MRPL11 mitochondrial ribosomal protein L11
MRPL21 mitochondrial ribosomal protein L21
MRPL39 mitochondrial ribosomal protein L39
MRPL45 mitochondrial ribosomal protein L45
MRPL48 mitochondrial ribosomal protein L48
MRPL49 mitochondrial ribosomal protein L49
MRPS18B mitochondrial ribosomal protein S18B
MRPS27 mitochondrial ribosomal protein S27
MRPS35 mitochondrial ribosomal protein S35
MRPS7 mitochondrial ribosomal protein S7
MTG2 mitochondrial ribosome-associated GTPase 2
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
NGDN neuroguidin, EIF4E binding protein
NLN neurolysin (metallopeptidase M3 family)
NMI N-myc (and STAT) interactor
NOP10 NOP10 ribonucleoprotein
NOP14 NOP14 nucleolar protein
NUP210 nucleoporin 210kDa
NUP37 nucleoporin 37kDa
PCDHB4 protocadherin beta 4
POGLUT1 protein O-glucosyltransferase 1
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1
PRPF4 pre-mRNA processing factor 4
RAB6A RAB6A, member RAS oncogene family
RBM25 RNA binding motif protein 25
RBM27 RNA binding motif protein 27
RBM39 RNA binding motif protein 39
RBM4 RNA binding motif protein 4
RFT1 RFT1 homolog (S. cerevisiae)
RNPS1 RNA binding protein S1, serine-rich domain
RPP38 ribonuclease P/MRP 38kDa subunit
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae)
RTN4IP1 reticulon 4 interacting protein 1
RTTN rotatin
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEH1L SEH1-like (S. cerevisiae)
SF3B2 splicing factor 3b, subunit 2, 145kDa
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SRSF1 serine/arginine-rich splicing factor 1
SRSF10 serine/arginine-rich splicing factor 10
SRSF3 serine/arginine-rich splicing factor 3
SRSF7 serine/arginine-rich splicing factor 7
SRSF9 serine/arginine-rich splicing factor 9
STK11IP serine/threonine kinase 11 interacting protein
SUGP2 SURP and G patch domain containing 2
SURF2 surfeit 2
TAOK1 TAO kinase 1
THOC1 THO complex 1
TRMT2B tRNA methyltransferase 2 homolog B (S. cerevisiae)
TST thiosulfate sulfurtransferase (rhodanese)
UBR5 ubiquitin protein ligase E3 component n-recognin 5
WDR43 WD repeat domain 43
WDR44 WD repeat domain 44