COLO-824 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

657 genes with high or low copy number in COLO-824 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
CCDC28A coiled-coil domain containing 28A 4.51153
ABRACL ABRA C-terminal like 4.51153
LOC645434 uncharacterized LOC645434 4.51153
FLJ46906 uncharacterized LOC441172 4.51153
HEBP2 heme binding protein 2 4.51153
REPS1 RALBP1 associated Eps domain containing 1 4.51153
ARFGEF3 ARFGEF family member 3 4.51153
PBOV1 prostate and breast cancer overexpressed 1 4.51153
LOC100507462 uncharacterized LOC100507462 4.51153
NHSL1 NHS-like 1 4.51153
MIR3145 microRNA 3145 4.51153
HECA headcase homolog (Drosophila) 4.51153
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 4.51153
TXLNB taxilin beta 4.51153
NHEG1 neuroblastoma highly expressed 1 3.12177
OLIG3 oligodendrocyte transcription factor 3 3.12177
IL22RA2 interleukin 22 receptor, alpha 2 3.12177
CCDC38 coiled-coil domain containing 38 3.12177
AMDHD1 amidohydrolase domain containing 1 3.12177
VAV3-AS1 VAV3 antisense RNA 1 3.12177
IFNGR1 interferon gamma receptor 1 3.12177
IL20RA interleukin 20 receptor, alpha 3.12177
PERP PERP, TP53 apoptosis effector 3.12177
LTA4H leukotriene A4 hydrolase 2.93899
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 2.93899
STXBP3 syntaxin binding protein 3 2.93899
HBS1L HBS1-like translational GTPase 2.93899
PEX7 peroxisomal biogenesis factor 7 2.93899
SLC35D3 solute carrier family 35, member D3 2.93899
PDE7B phosphodiesterase 7B 2.93899
HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis) 2.93899
MIR3662 microRNA 3662 2.93899
MAP3K5 mitogen-activated protein kinase kinase kinase 5 2.93899
PRPF38B pre-mRNA processing factor 38B 2.93899
BCLAF1 BCL2-associated transcription factor 1 2.93899
ALDH8A1 aldehyde dehydrogenase 8 family, member A1 2.93899
MTFR2 mitochondrial fission regulator 2 2.93899
HAL histidine ammonia-lyase 2.93899
NBPF6 neuroblastoma breakpoint family, member 6 2.93899
NBPF4 neuroblastoma breakpoint family, member 4 2.93899
LOC100130476 uncharacterized LOC100130476 2.93899
FAM102B family with sequence similarity 102, member B 2.93899
LINC00271 long intergenic non-protein coding RNA 271 2.76305
FNDC7 fibronectin type III domain containing 7 2.76305
AHI1 Abelson helper integration site 1 2.64759
MBOAT1 membrane bound O-acyltransferase domain containing 1 2.64759
PLIN2 perilipin 2 2.64759
HAUS6 HAUS augmin-like complex, subunit 6 2.64759
ZNHIT6 zinc finger, HIT-type containing 6 2.64759
MIR4423 microRNA 4423 2.64759
DDAH1 dimethylarginine dimethylaminohydrolase 1 2.64759
MCOLN3 mucolipin 3 2.64759
VAV3 vav 3 guanine nucleotide exchange factor 2.64759
IFI44L interferon-induced protein 44-like 2.64759
C1ORF52 chromosome 1 open reading frame 52 2.64759
MYB v-myb avian myeloblastosis viral oncogene homolog 2.64759
ADGRL4 adhesion G protein-coupled receptor L4 2.64759
IFI44 interferon-induced protein 44 2.64759
CYR61 cysteine-rich, angiogenic inducer, 61 2.64759
LOC100129138 THAP domain containing, apoptosis associated protein 3 pseudogene 2.64759
BCL10 B-cell CLL/lymphoma 10 2.64759
WDR63 WD repeat domain 63 2.64759
LOC646626 uncharacterized LOC646626 2.64759
RRAGA Ras-related GTP binding A 2.64759
ZNF326 zinc finger protein 326 2.64759
SCARNA8 small Cajal body-specific RNA 8 2.64759
MIR548AP microRNA 548ap 2.59653
LRRC39 leucine rich repeat containing 39 2.59653
GLMN glomulin, FKBP associated protein 2.59653
XKR4 XK, Kell blood group complex subunit-related family, member 4 2.59653
SASS6 spindle assembly 6 homolog (C. elegans) 2.59653
BTBD8 BTB (POZ) domain containing 8 2.59653
GEMIN8P4 gem (nuclear organelle) associated protein 8 pseudogene 4 2.59653
NTNG1 netrin G1 2.59653
MIR548D1 microRNA 548d-1 2.59653
F3 coagulation factor III (thromboplastin, tissue factor) 2.59653
ODF2L outer dense fiber of sperm tails 2-like 2.59653
RBMXL1 RNA binding motif protein, X-linked-like 1 2.59653
GBP6 guanylate binding protein family, member 6 2.59653
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 2.59653
COL24A1 collagen, type XXIV, alpha 1 2.59653
GBP3 guanylate binding protein 3 2.59653
HIAT1 hippocampus abundant transcript 1 2.59653
LPAR3 lysophosphatidic acid receptor 3 2.59653
GBP1 guanylate binding protein 1, interferon-inducible 2.59653
GTF2B general transcription factor IIB 2.59653
RPS6 ribosomal protein S6 2.59653
PALMD palmdelphin 2.59653
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 2.59653
CLCA1 chloride channel accessory 1 2.59653
CLCA4 chloride channel accessory 4 2.59653
CLCA2 chloride channel accessory 2 2.59653
DENND4C DENN/MADD domain containing 4C 2.59653
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 2.59653
PRL prolactin 2.59653
EPHX4 epoxide hydrolase 4 2.59653
RTCA RNA 3'-terminal phosphate cyclase 2.59653
LMO4 LIM domain only 4 2.59653
ACTG1P4 actin gamma 1 pseudogene 4 2.59653
MIR548AA1 microRNA 548aa-1 2.59653
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans) 2.59653
SOX4 SRY (sex determining region Y)-box 4 2.59653
PRMT6 protein arginine methyltransferase 6 2.59653
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 2.59653
LRRC8D leucine rich repeat containing 8 family, member D 2.59653
LRRC8C leucine rich repeat containing 8 family, member C 2.59653
CLCA3P chloride channel accessory 3, pseudogene 2.59653
RB1CC1 RB1-inducible coiled-coil 1 2.59653
FAM150A family with sequence similarity 150, member A 2.59653
TRMT13 tRNA methyltransferase 13 homolog (S. cerevisiae) 2.59653
MCOLN2 mucolipin 2 2.59653
FRRS1 ferric-chelate reductase 1 2.59653
SDR16C5 short chain dehydrogenase/reductase family 16C, member 5 2.59653
C1ORF146 chromosome 1 open reading frame 146 2.59653
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 2.59653
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 2.59653
AMY2B amylase, alpha 2B (pancreatic) 2.59653
RNPC3 RNA-binding region (RNP1, RRM) containing 3 2.59653
GFI1 growth factor independent 1 transcription repressor 2.59653
KIAA1107 KIAA1107 2.59653
LRRC8B leucine rich repeat containing 8 family, member B 2.59653
ADGRL2 adhesion G protein-coupled receptor L2 2.59653
TMEM68 transmembrane protein 68 2.59653
HDGFL1 hepatoma derived growth factor-like 1 2.59653
BRDT bromodomain, testis-specific 2.59653
PENK proenkephalin 2.59653
TGS1 trimethylguanosine synthase 1 2.59653
RPAP2 RNA polymerase II associated protein 2 2.59653
CCBL2 cysteine conjugate-beta lyase 2 2.59653
SH3GLB1 SH3-domain GRB2-like endophilin B1 2.59653
MIR553 microRNA 553 2.59653
SEP15 15 kDa selenoprotein 2.59653
FLJ27354 uncharacterized LOC400761 2.59653
GBP1P1 guanylate binding protein 1, interferon-inducible pseudogene 1 2.59653
CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2.59653
NPBWR1 neuropeptides B/W receptor 1 2.59653
SBF1P1 SET binding factor 1 pseudogene 1 2.59653
CDC7 cell division cycle 7 2.49065
RP1 retinitis pigmentosa 1 (autosomal dominant) 2.49065
MRPL15 mitochondrial ribosomal protein L15 2.49065
LYN LYN proto-oncogene, Src family tyrosine kinase 2.49065
SPATA1 spermatogenesis associated 1 2.49065
COL11A1 collagen, type XI, alpha 1 2.49065
GNG5 guanine nucleotide binding protein (G protein), gamma 5 2.49065
CTBS chitobiase, di-N-acetyl- 2.49065
LOC100129620 uncharacterized LOC100129620 2.49065
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 2.49065
ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2.49065
PDE7A phosphodiesterase 7A 2.49065
MIR760 microRNA 760 2.49065
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4 2.49065
LOC729930 chromosome 11 open reading frame 74 pseudogene 2.49065
RPL5 ribosomal protein L5 2.49065
E2F3 E2F transcription factor 3 2.49065
SLC30A7 solute carrier family 30 (zinc transporter), member 7 2.49065
CNN3 calponin 3, acidic 2.49065
ARMC1 armadillo repeat containing 1 2.49065
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1 2.49065
EVI5 ecotropic viral integration site 5 2.49065
TGFBR3 transforming growth factor, beta receptor III 2.49065
GCLM glutamate-cysteine ligase, modifier subunit 2.49065
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta 2.49065
VCAM1 vascular cell adhesion molecule 1 2.49065
LINC00251 long intergenic non-protein coding RNA 251 2.49065
LOC729970 hCG2028352-like 2.49065
TMEM56-RWDD3 TMEM56-RWDD3 readthrough 2.49065
UOX urate oxidase, pseudogene 2.49065
SLC44A3 solute carrier family 44, member 3 2.49065
RPF1 ribosome production factor 1 homolog (S. cerevisiae) 2.49065
SNX7 sorting nexin 7 2.49065
FAM69A family with sequence similarity 69, member A 2.49065
SNORD21 small nucleolar RNA, C/D box 21 2.49065
LPPR5 lipid phosphate phosphatase-related protein type 5 2.49065
MIR137 microRNA 137 2.49065
LYPLA1 lysophospholipase I 2.49065
SNORD54 small nucleolar RNA, C/D box 54 2.49065
GBP5 guanylate binding protein 5 2.49065
PKN2 protein kinase N2 2.49065
CRH corticotropin releasing hormone 2.49065
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 2.49065
EXTL2 exostosin-like glycosyltransferase 2 2.49065
OPRK1 opioid receptor, kappa 1 2.49065
LINC01555 long intergenic non-protein coding RNA 1555 2.49065
CDC14A cell division cycle 14A 2.49065
TTLL7 tubulin tyrosine ligase-like family member 7 2.49065
TMEM56 transmembrane protein 56 2.49065
RGS20 regulator of G-protein signaling 20 2.49065
GPR88 G protein-coupled receptor 88 2.49065
PLAG1 pleiomorphic adenoma gene 1 2.49065
RPS20 ribosomal protein S20 2.49065
LOC729987 uncharacterized LOC729987 2.49065
SAMD13 sterile alpha motif domain containing 13 2.49065
TBX15 T-box 15 2.49065
RWDD3 RWD domain containing 3 2.49065
DBT dihydrolipoamide branched chain transacylase E2 2.49065
GBP4 guanylate binding protein 4 2.49065
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 2.49065
FLJ31662 uncharacterized LOC440594 2.49065
SOX17 SRY (sex determining region Y)-box 17 2.49065
SNORA66 small nucleolar RNA, H/ACA box 66 2.49065
DPH5 diphthamide biosynthesis 5 2.49065
DNASE2B deoxyribonuclease II beta 2.49065
MOS v-mos Moloney murine sarcoma viral oncogene homolog 2.49065
TTC39B tetratricopeptide repeat domain 39B 2.49065
TRIM55 tripartite motif containing 55 2.49065
WARS2 tryptophanyl tRNA synthetase 2, mitochondrial 2.49065
MIR2682 microRNA 2682 2.49065
GBP2 guanylate binding protein 2, interferon-inducible 2.49065
SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 2.49065
GBP7 guanylate binding protein 7 2.49065
TCEA1 transcription elongation factor A (SII), 1 2.49065
LOC401463 uncharacterized LOC401463 2.49065
MTFR1 mitochondrial fission regulator 1 2.49065
BHLHE22 basic helix-loop-helix family, member e22 2.49065
MIG7 mig-7 2.44392
TCF24 transcription factor 24 2.44392
C8ORF46 chromosome 8 open reading frame 46 2.44392
C8ORF44 chromosome 8 open reading frame 44 2.44392
ADHFE1 alcohol dehydrogenase, iron containing, 1 2.44392
LINC00293 long intergenic non-protein coding RNA 293 2.44392
COPS5 COP9 signalosome subunit 5 2.44392
PTTG3P pituitary tumor-transforming 3, pseudogene 2.44392
TMED5 transmembrane emp24 protein transport domain containing 5 2.44392
FNBP1L formin binding protein 1-like 2.44392
ZNF644 zinc finger protein 644 2.44392
C8ORF44-SGK3 C8orf44-SGK3 readthrough 2.44392
LOC100131564 uncharacterized LOC100131564 2.44392
CCDC18 coiled-coil domain containing 18 2.44392
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) 2.44392
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 2.44392
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 2.44392
SGK3 serum/glucocorticoid regulated kinase family, member 3 2.44392
PPP1R42 protein phosphatase 1, regulatory subunit 42 2.44392
BARHL2 BarH-like homeobox 2 2.44392
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 2.44392
SNORD87 small nucleolar RNA, C/D box 87 2.44392
MTF2 metal response element binding transcription factor 2 2.44392
LOC653513 phosphodiesterase 4D interacting protein pseudogene 2.44392
ARHGAP29 Rho GTPase activating protein 29 2.44392
MIR124-2 microRNA 124-2 2.44392
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 2.44392
CA8 carbonic anhydrase VIII 2.44392
BCAR3 breast cancer anti-estrogen resistance 3 2.44392
PTBP2 polypyrimidine tract binding protein 2 2.44392
SNHG6 small nucleolar RNA host gene 6 2.44392
VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1 2.44392
PDE4DIP phosphodiesterase 4D interacting protein 2.44392
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 2.44392
RAB2A RAB2A, member RAS oncogene family 2.44392
LPPR4 lipid phosphate phosphatase-related protein type 4 2.44392
LOC100129046 uncharacterized LOC100129046 2.44392
CSPP1 centrosome and spindle pole associated protein 1 2.44392
MCMDC2 minichromosome maintenance domain containing 2 2.44392
DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) 2.44392
LOC286189 2.41451
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 2.41451
MCM4 minichromosome maintenance complex component 4 2.41451
TTPA tocopherol (alpha) transfer protein 2.41451
GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) 2.41451
DPYD-AS1 DPYD antisense RNA 1 2.41451
LOC100287846 patched 1 pseudogene 2.41451
UG0898H09 uncharacterized LOC643763 2.41451
NOTCH2NL notch 2 N-terminal like 2.41451
PRKDC protein kinase, DNA-activated, catalytic polypeptide 2.41451
PPIAL4A peptidylprolyl isomerase A (cyclophilin A)-like 4A 2.39327
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D 2.39327
NBPF14 neuroblastoma breakpoint family, member 14 2.39327
C8ORF34 chromosome 8 open reading frame 34 2.39327
NKAIN3 Na+/K+ transporting ATPase interacting 3 2.36889
HFE2 hemochromatosis type 2 (juvenile) 2.36889
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3 2.36889
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 2.36889
SHE Src homology 2 domain containing E 2.36889
MIR5087 microRNA 5087 2.36889
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 2.36889
NBPF9 neuroblastoma breakpoint family, member 9 2.36889
CLVS1 clavesin 1 2.36889
TXNIP thioredoxin interacting protein 2.36889
ADAR adenosine deaminase, RNA-specific 2.36889
LOC100130298 hCG1816373-like 2.36889
RNF115 ring finger protein 115 2.35236
POLR3C polymerase (RNA) III (DNA directed) polypeptide C (62kD) 2.35236
GJA8 gap junction protein, alpha 8, 50kDa 2.35236
IL6R interleukin 6 receptor 2.35236
ASPH aspartate beta-hydroxylase 2.35236
PEX11B peroxisomal biogenesis factor 11 beta 2.35236
CRCT1 cysteine-rich C-terminal 1 2.35236
ANKRD35 ankyrin repeat domain 35 2.35236
NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 2.35236
GPHRB golgi pH regulator B 2.35236
PDZK1 PDZ domain containing 1 2.35236
LCE5A late cornified envelope 5A 2.35236
CRNN cornulin 2.35236
GJA5 gap junction protein, alpha 5, 40kDa 2.35236
MIR4470 microRNA 4470 2.35236
RBM8A RNA binding motif protein 8A 2.35236
CD160 CD160 molecule 2.35236
GNRHR2 gonadotropin-releasing hormone (type 2) receptor 2, pseudogene 2.35236
ITGA10 integrin, alpha 10 2.35236
LIX1L Lix1 homolog (chicken) like 2.35236
PIAS3 protein inhibitor of activated STAT, 3 2.35236
LCE1F late cornified envelope 1F 2.3178
LCE3A late cornified envelope 3A 2.3178
NBPF8 neuroblastoma breakpoint family, member 8 2.3178
ANKRD34A ankyrin repeat domain 34A 2.3178
LCE3E late cornified envelope 3E 2.3178
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2 2.3178
GPHRA golgi pH regulator A 2.3178
AQP10 aquaporin 10 2.3178
FLG filaggrin 2.3178
FLG2 filaggrin family member 2 2.3178
HAX1 HCLS1 associated protein X-1 2.3178
POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like 2.3178
S100A10 S100 calcium binding protein A10 2.3178
S100A11 S100 calcium binding protein A11 2.3178
LCE6A late cornified envelope 6A 2.3178
LCE1B late cornified envelope 1B 2.30944
TCHH trichohyalin 2.30944
FMO5 flavin containing monooxygenase 5 2.30944
C2CD4D C2 calcium-dependent domain containing 4D 2.30944
SPRR3 small proline-rich protein 3 2.30944
SPRR2D small proline-rich protein 2D 2.30944
KPRP keratinocyte proline-rich protein 2.30944
SMCP sperm mitochondria-associated cysteine-rich protein 2.30944
TDRKH tudor and KH domain containing 2.30944
ACP6 acid phosphatase 6, lysophosphatidic 2.30944
HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) 2.30944
TCHHL1 trichohyalin-like 1 2.30944
NBPF12 neuroblastoma breakpoint family, member 12 2.30944
RPTN repetin 2.30944
LCE1A late cornified envelope 1A 2.30944
LCE1C late cornified envelope 1C 2.30944
LCE4A late cornified envelope 4A 2.30944
BCL9 B-cell CLL/lymphoma 9 2.30944
MIR190B microRNA 190b 2.30944
SNX27 sorting nexin family member 27 2.30944
LOC100132111 uncharacterized LOC100132111 2.30944
LOC728989 phosphodiesterase 4D interacting protein pseudogene 2.30944
SPRR1B small proline-rich protein 1B 2.30944
MRPL9 mitochondrial ribosomal protein L9 2.30944
CELF3 CUGBP, Elav-like family member 3 2.30944
SPRR1A small proline-rich protein 1A 2.30944
NBPF10 neuroblastoma breakpoint family, member 10 2.30944
LCE2A late cornified envelope 2A 2.30944
C1ORF68 chromosome 1 open reading frame 68 2.30944
UBAP2L ubiquitin associated protein 2-like 2.30944
THEM5 thioesterase superfamily member 5 2.30944
THEM4 thioesterase superfamily member 4 2.30944
OAZ3 ornithine decarboxylase antizyme 3 2.30944
CHD1L chromodomain helicase DNA binding protein 1-like 2.30944
LINGO4 leucine rich repeat and Ig domain containing 4 2.30944
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 2.30944
LCE3D late cornified envelope 3D 2.30944
C1ORF43 chromosome 1 open reading frame 43 2.30944
C1ORF189 chromosome 1 open reading frame 189 2.30944
TPM3 tropomyosin 3 2.30944
LCE2C late cornified envelope 2C 2.30944
IVL involucrin 2.30944
LCE2D late cornified envelope 2D 2.30944
LCE2B late cornified envelope 2B 2.30944
RORC RAR-related orphan receptor C 2.30944
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit 2.283
CREB3L4 cAMP responsive element binding protein 3-like 4 2.283
DENND4B DENN/MADD domain containing 4B 2.283
NUP210L nucleoporin 210kDa-like 2.283
SNAI1 snail family zinc finger 1 2.283
HRNR hornerin 2.283
TTPAL tocopherol (alpha) transfer protein-like 2.283
SPRR2E small proline-rich protein 2E 2.283
INTS3 integrator complex subunit 3 2.283
SV2A synaptic vesicle glycoprotein 2A 2.283
SPRR4 small proline-rich protein 4 2.283
LINC00624 long intergenic non-protein coding RNA 624 2.283
GATAD2B GATA zinc finger domain containing 2B 2.283
HNF4A hepatocyte nuclear factor 4, alpha 2.283
C20ORF62 chromosome 20 open reading frame 62 2.283
NBPF13P neuroblastoma breakpoint family, member 13, pseudogene 2.283
MIR3646 microRNA 3646 2.283
JTB jumping translocation breakpoint 2.283
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 2.283
TMEM189 transmembrane protein 189 2.283
SPATA2 spermatogenesis associated 2 2.283
CRTC2 CREB regulated transcription coactivator 2 2.283
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2.283
LELP1 late cornified envelope-like proline-rich 1 2.283
SF3B4 splicing factor 3b, subunit 4, 49kDa 2.283
RAB13 RAB13, member RAS oncogene family 2.283
LOR loricrin 2.283
RNF114 ring finger protein 114 2.283
HIST2H2AC histone cluster 2, H2ac 2.283
SPRR2C small proline-rich protein 2C (pseudogene) 2.283
HIST2H2BE histone cluster 2, H2be 2.283
HIST2H2AB histone cluster 2, H2ab 2.283
SLC39A1 solute carrier family 39 (zinc transporter), member 1 2.283
RPS27 ribosomal protein S27 2.283
PRR9 proline rich 9 2.283
OTUD7B OTU deubiquitinase 7B 2.283
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 2.283
MTMR11 myotubularin related protein 11 2.283
SPRR2G small proline-rich protein 2G 2.283
SPRR2F small proline-rich protein 2F 2.283
SPRR2B small proline-rich protein 2B 2.283
BOLA1 bolA family member 1 2.283
S100A2 S100 calcium binding protein A2 2.26395
S100A8 S100 calcium binding protein A8 2.26395
CHTOP chromatin target of PRMT1 2.26395
S100A5 S100 calcium binding protein A5 2.26395
S100A14 S100 calcium binding protein A14 2.26395
S100A6 S100 calcium binding protein A6 2.26395
ILF2 interleukin enhancer binding factor 2 2.26395
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma 2.26395
NPR1 natriuretic peptide receptor 1 2.26395
S100A7L2 S100 calcium binding protein A7-like 2 2.26395
S100A4 S100 calcium binding protein A4 2.26395
S100A7 S100 calcium binding protein A7 2.26395
S100A9 S100 calcium binding protein A9 2.26395
S100A16 S100 calcium binding protein A16 2.26395
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 2.26395
S100A3 S100 calcium binding protein A3 2.26395
SNAPIN SNAP-associated protein 2.26395
S100A13 S100 calcium binding protein A13 2.26395
SPRR2A small proline-rich protein 2A 2.26395
PGLYRP4 peptidoglycan recognition protein 4 2.26395
S100A12 S100 calcium binding protein A12 2.26395
S100A1 S100 calcium binding protein A1 2.26395
SNORA58 small nucleolar RNA, H/ACA box 58 2.26395
S100A7A S100 calcium binding protein A7A 2.26395
SERINC3 serine incorporator 3 2.26395
PGLYRP3 peptidoglycan recognition protein 3 2.26395
C1ORF54 chromosome 1 open reading frame 54 2.25904
APH1A APH1A gamma secretase subunit 2.25904
CGN cingulin 2.25904
TUFT1 tuftelin 1 2.25904
CA14 carbonic anhydrase XIV 2.25904
PLEKHO1 pleckstrin homology domain containing, family O member 1 2.25904
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae) 2.25904
MIR645 microRNA 645 2.25904
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 2.25904
MIR554 microRNA 554 2.25904
TNFAIP8L2-SCNM1 TNFAIP8L2-SCNM1 readthrough 2.24845
TIPE2 TNF alpha induced protein 8 like 2 2.24845
SELENBP1 selenium binding protein 1 2.24845
RFX5 regulatory factor X, 5 (influences HLA class II expression) 2.24845
SCNM1 sodium channel modifier 1 2.24845
MRPS21 mitochondrial ribosomal protein S21 2.24845
FAM65C family with sequence similarity 65, member C 2.24845
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1 2.24845
PRPF3 pre-mRNA processing factor 3 2.24845
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 2.24139
TMOD4 tropomodulin 4 (muscle) 2.24139
CDC42SE1 CDC42 small effector 1 2.24139
PI4KB phosphatidylinositol 4-kinase, catalytic, beta 2.24139
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 2.24139
ZNF687 zinc finger protein 687 2.24139
POGZ pogo transposable element with ZNF domain 2.24139
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4 2.24139
SETDB1 SET domain, bifurcated 1 2.24139
GABPB2 GA binding protein transcription factor, beta subunit 2 2.24139
PTPN1 protein tyrosine phosphatase, non-receptor type 1 2.24139
C1ORF56 chromosome 1 open reading frame 56 2.24139
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 2.24139
CERS2 ceramide synthase 2 2.24139
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 2.24139
SEMA6C sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 2.24139
FAM63A family with sequence similarity 63, member A 2.2355
ANXA9 annexin A9 2.2355
PRUNE prune exopolyphosphatase 2.2355
BNIPL BCL2/adenovirus E1B 19kD interacting protein like 2.2355
RPRD2 regulation of nuclear pre-mRNA domain containing 2 2.23324
ARNT aryl hydrocarbon receptor nuclear translocator 2.23324
ECM1 extracellular matrix protein 1 2.23078
CTSS cathepsin S 2.23078
ENSA endosulfine alpha 2.23078
CTSK cathepsin K 2.23078
FALEC focally amplified long non-coding RNA in epithelial cancer 2.23078
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 2.23078
HORMAD1 HORMA domain containing 1 2.23078
GOLPH3L golgi phosphoprotein 3-like 2.23078
MCL1 myeloid cell leukemia 1 2.22917
ADAMTSL4 ADAMTS-like 4 2.22917
MIR4257 microRNA 4257 2.22917
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 2.22558
ECT2L epithelial cell transforming 2 like 2.15316
DLEU2L deleted in lymphocytic leukemia 2-like 2.14116
PGM1 phosphoglucomutase 1 2.14116
ROR1 receptor tyrosine kinase-like orphan receptor 1 2.14116
CTH cystathionine gamma-lyase 2.14116
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 2.14116
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 2.14116
EFCAB7 EF-hand calcium binding domain 7 2.14116
NEGR1-IT1 NEGR1 intronic transcript 1 2.13646
NEGR1 neuronal growth regulator 1 2.13622
FPGT-TNNI3K FPGT-TNNI3K readthrough 2.1316
FPGT fucose-1-phosphate guanylyltransferase 2.1316
LRRIQ3 leucine-rich repeats and IQ motif containing 3 2.1316
TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 2.12931
TNNI3K TNNI3 interacting kinase 2.12931
CRYZ crystallin, zeta (quinone reductase) 2.12931
PTGER3 prostaglandin E receptor 3 (subtype EP3) 2.12931
MIR186 microRNA 186 2.12703
MAP7 microtubule-associated protein 7 2.12703
ZRANB2 zinc finger, RAN-binding domain containing 2 2.12703
ZRANB2-AS1 ZRANB2 antisense RNA 1 2.12703
SRSF11 serine/arginine-rich splicing factor 11 2.12225
LRRC40 leucine rich repeat containing 40 2.12225
RABGGTB Rab geranylgeranyltransferase, beta subunit 2.12225
LHX8 LIM homeobox 8 2.12225
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2.12225
SNORD45A small nucleolar RNA, C/D box 45A 2.12225
ASB17 ankyrin repeat and SOCS box containing 17 2.12225
ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain 2.12225
SNORD45B small nucleolar RNA, C/D box 45B 2.12225
ZRANB2-AS2 ZRANB2 antisense RNA 2 (head to head) 2.12225
SLC44A5 solute carrier family 44, member 5 2.12225
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 2.12225
SNORD45C small nucleolar RNA, C/D box 45C 2.12225
HHLA3 HERV-H LTR-associating 3 2.12225
LRRC7 leucine rich repeat containing 7 2.12225
MSH4 mutS homolog 4 2.12225
ANKRD13C ankyrin repeat domain 13C 2.12225
NEXN nexilin (F actin binding protein) 2.10992
GIPC2 GIPC PDZ domain containing family, member 2 2.10992
PTGFR prostaglandin F receptor (FP) 2.10992
DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 2.10992
MGC27382 uncharacterized MGC27382 2.10992
SAXO1 stabilizer of axonemal microtubules 1 2.10992
FUBP1 far upstream element (FUSE) binding protein 1 2.10992
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7 2.10992
FAM73A family with sequence similarity 73, member A 2.10992
AMY1A amylase, alpha 1A (salivary) 2.10617
AMY2A amylase, alpha 2A (pancreatic) 2.10617
SNORD27 small nucleolar RNA, C/D box 27 2.10607
SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 2.10579
SH3GL2 SH3-domain GRB2-like 2 2.10556
MIR3152 microRNA 3152 2.10177
ADAMTSL1 ADAMTS-like 1 2.10177
LOC100507651 2.10038
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 2.10038
IMPAD1 inositol monophosphatase domain containing 1 2.10038
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 2.10038
ACER2 alkaline ceramidase 2 2.10038
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2.10038
PIGK phosphatidylinositol glycan anchor biosynthesis, class K 2.10038
ZZZ3 zinc finger, ZZ-type containing 3 2.10038
ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 2.10038
USP33 ubiquitin specific peptidase 33 2.10038
KIAA1468 KIAA1468 2.10038
LINC00588 long intergenic non-protein coding RNA 588 2.10038
AK5 adenylate kinase 5 2.10038
LOC286177 uncharacterized LOC286177 2.10038
LOC100996669 2.10038
RNF152 ring finger protein 152 2.10038
ST18 suppression of tumorigenicity 18, zinc finger 2.10038
ZCCHC2 zinc finger, CCHC domain containing 2 2.10038
PIGN phosphatidylinositol glycan anchor biosynthesis, class N 2.10038
C9ORF92 chromosome 9 open reading frame 92 2.09727
PSIP1 PC4 and SFRS1 interacting protein 1 2.09628
KDM4C lysine (K)-specific demethylase 4C 2.09628
PXDNL peroxidasin-like 2.09529
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 2.09431
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 2.09431
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 2.09431
BCL2 B-cell CLL/lymphoma 2 2.09431
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) 2.09431
PRKACB protein kinase, cAMP-dependent, catalytic, beta 2.09431
LOC389705 chromosome 4 open reading frame 27 pseudogene 2.09431
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12 2.09431
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13 2.09431
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene) 2.09431
FREM1 FRAS1 related extracellular matrix 1 2.09431
MIR137HG MIR137 host gene 2.09431
KDSR 3-ketodihydrosphingosine reductase 2.09431
CER1 cerberus 1, DAN family BMP antagonist 2.09431
BNC2 basonuclin 2 2.09316
CNTLN centlein, centrosomal protein 2.09314
DMRT3 doublesex and mab-3 related transcription factor 3 2.09314
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 2.09294
DMRT2 doublesex and mab-3 related transcription factor 2 2.09294
GLIS3 GLIS family zinc finger 3 2.0925
GLIS3-AS1 GLIS3 antisense RNA 1 2.0925
VLDLR very low density lipoprotein receptor 2.0925
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2 2.0925
KIAA0020 KIAA0020 2.0925
CCDC171 coiled-coil domain containing 171 2.09205
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 2.09161
GLDC glycine dehydrogenase (decarboxylating) 2.09117
INSL6 insulin-like 6 2.09117
JAK2 Janus kinase 2 2.09117
MIR101-2 microRNA 101-2 2.09117
CPA6 carboxypeptidase A6 2.09073
PTPRD protein tyrosine phosphatase, receptor type, D 2.08947
KANK1 KN motif and ankyrin repeat domains 1 2.08887
RFX3 regulatory factor X, 3 (influences HLA class II expression) 2.08882
C9ORF66 chromosome 9 open reading frame 66 2.08877
DMRT1 doublesex and mab-3 related transcription factor 1 2.08877
NFIB nuclear factor I/B 2.08856
CBWD1 COBW domain containing 1 2.08856
LINC00583 long intergenic non-protein coding RNA 583 2.08839
FOXD4 forkhead box D4 2.08839
INSL4 insulin-like 4 (placenta) 2.08781
IL33 interleukin 33 2.08781
AK3 adenylate kinase 3 2.08781
CDC37L1 cell division cycle 37-like 1 2.08781
SPATA6L spermatogenesis associated 6-like 2.08781
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 2.08781
TPD52L3 tumor protein D52-like 3 2.08781
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 2.08781
RLN1 relaxin 1 2.08781
ZDHHC21 zinc finger, DHHC-type containing 21 2.08781
RLN2 relaxin 2 2.08781
DPYD dihydropyrimidine dehydrogenase 2.08781
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 2.08781
RCL1 RNA terminal phosphate cyclase-like 1 2.08781
EFCAB1 EF-hand calcium binding domain 1 2.08712
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 2.08712
TOX thymocyte selection-associated high mobility group box 2.08712
FAM110B family with sequence similarity 110, member B 2.08712
SDCBP syndecan binding protein (syntenin) 2.08712
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 2.08712
DOCK8 dedicator of cytokinesis 8 2.0845
LURAP1L leucine rich adaptor protein 1-like 2.08441
CD274 CD274 molecule 2.08391
PDCD1LG2 programmed cell death 1 ligand 2 2.08391
NBPF15 neuroblastoma breakpoint family, member 15 2.08391
UBXN2B UBX domain protein 2B 2.08334
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1 2.08334
TYRP1 tyrosinase-related protein 1 2.08125
MPDZ multiple PDZ domain protein 2.08116
MIR4665 microRNA 4665 2.08066
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein 2.08066
SNTG1 syntrophin, gamma 1 2.08066
RANBP6 RAN binding protein 6 2.08066
TDRD10 tudor domain containing 10 2.08021
C8ORF22 chromosome 8 open reading frame 22 2.08021
CHD7 chromodomain helicase DNA binding protein 7 2.08021
ERMP1 endoplasmic reticulum metallopeptidase 1 2.07822
KIAA2026 KIAA2026 2.07822
MLANA melan-A 2.07822
SNAI2 snail family zinc finger 2 2.07776
LCE1E late cornified envelope 1E 2.07574
LCE1D late cornified envelope 1D 2.0752
SNORA51 small nucleolar RNA, H/ACA box 51 2.06473
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
GBX2 gastrulation brain homeobox 2 -5.12655
ASB18 ankyrin repeat and SOCS box containing 18 -5.12655
IQCA1 IQ motif containing with AAA domain 1 -5.12655
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -3.83684
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -3.83684
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -3.56449
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 -3.24687
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -3.24687
MGC16025 uncharacterized LOC85009 -3.24687
JARID2 jumonji, AT rich interactive domain 2 -3.16503
MIR2467 microRNA 2467 -3.11641
MIR4269 microRNA 4269 -3.11641
HDAC4 histone deacetylase 4 -3.11641