COLO-829 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Tumour (Cell Model Passports, SIDM00909)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00909
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Genes

198 proteins associated with the cell line COLO-829 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACP5 acid phosphatase 5, tartrate resistant
AGA aspartylglucosaminidase
AGK acylglycerol kinase
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
APC2 adenomatosis polyposis coli 2
ATF7IP activating transcription factor 7 interacting protein
ATOX1 antioxidant 1 copper chaperone
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
CALU calumenin
CAPN5 calpain 5
CD63 CD63 molecule
CDK2 cyclin-dependent kinase 2
CEP350 centrosomal protein 350kDa
CMC1 C-x(9)-C motif containing 1
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CPOX coproporphyrinogen oxidase
CRELD2 cysteine-rich with EGF-like domains 2
CTSL cathepsin L
CTSZ cathepsin Z
CYCS cytochrome c, somatic
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
DDT D-dopachrome tautomerase
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
DPP7 dipeptidyl-peptidase 7
EEA1 early endosome antigen 1
EIF4E2 eukaryotic translation initiation factor 4E family member 2
ENO2 enolase 2 (gamma, neuronal)
FAM162A family with sequence similarity 162, member A
FRMD4A FERM domain containing 4A
GBA glucosidase, beta, acid
GDF15 growth differentiation factor 15
GLMP glycosylated lysosomal membrane protein
GNS glucosamine (N-acetyl)-6-sulfatase
GPNMB glycoprotein (transmembrane) nmb
GPX1 glutathione peroxidase 1
GSN gelsolin
HEXB hexosaminidase B (beta polypeptide)
HK2 hexokinase 2
IGSF8 immunoglobulin superfamily, member 8
LCLAT1 lysocardiolipin acyltransferase 1
LGALS3 lectin, galactoside-binding, soluble, 3
LOC105373271 uncharacterized LOC105373271
MAN2B1 mannosidase, alpha, class 2B, member 1
MOSPD2 motile sperm domain containing 2
MRPL40 mitochondrial ribosomal protein L40
NAGA N-acetylgalactosaminidase, alpha-
NAGLU N-acetylglucosaminidase, alpha
NCOR1 nuclear receptor corepressor 1
NDRG1 N-myc downstream regulated 1
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa
NDUFB10 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa
NHSL1 NHS-like 1
NISCH nischarin
NIT2 nitrilase family, member 2
NMD3 NMD3 ribosome export adaptor
NPC2 Niemann-Pick disease, type C2
NUP50 nucleoporin 50kDa
OXSM 3-oxoacyl-ACP synthase, mitochondrial
PCLO piccolo presynaptic cytomatrix protein
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PGK1 phosphoglycerate kinase 1
PLBD2 phospholipase B domain containing 2
PLIN2 perilipin 2
PPAN peter pan homolog (Drosophila)
PPP6R2 protein phosphatase 6, regulatory subunit 2
PRDX4 peroxiredoxin 4
PRODH proline dehydrogenase (oxidase) 1
PYGB phosphorylase, glycogen; brain
QDPR quinoid dihydropteridine reductase
RAB5B RAB5B, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RAF1 Raf-1 proto-oncogene, serine/threonine kinase
S100A13 S100 calcium binding protein A13
SDCBP syndecan binding protein (syntenin)
SDF2L1 stromal cell-derived factor 2-like 1
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
SND1 staphylococcal nuclease and tudor domain containing 1
SPRY4 sprouty homolog 4 (Drosophila)
SSBP1 single-stranded DNA binding protein 1, mitochondrial
TDRKH tudor and KH domain containing
THBS2 thrombospondin 2
THTPA thiamine triphosphatase
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast)
TIMMDC1 translocase of inner mitochondrial membrane domain containing 1
TIMP1 TIMP metallopeptidase inhibitor 1
TOLLIP toll interacting protein
TOM1 target of myb1 (chicken)
TPP1 tripeptidyl peptidase I
TRABD TraB domain containing
TUBB2A tubulin, beta 2A class IIa
TUBB4A tubulin, beta 4A class IVa
UBN2 ubinuclein 2
UPP1 uridine phosphorylase 1
VAT1 vesicle amine transport 1
WDR91 WD repeat domain 91
ZNF800 zinc finger protein 800

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ACAT2 acetyl-CoA acetyltransferase 2
AP1S1 adaptor-related protein complex 1, sigma 1 subunit
ARMCX1 armadillo repeat containing, X-linked 1
ASMTL acetylserotonin O-methyltransferase-like
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
C1ORF109 chromosome 1 open reading frame 109
CARD8 caspase recruitment domain family, member 8
CAV2 caveolin 2
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CLP1 cleavage and polyadenylation factor I subunit 1
CNN2 calponin 2
COIL coilin
COPD2 Chronic obstructive pulmonary disease QTL 2
CPE carboxypeptidase E
CRBN cereblon
CRNKL1 crooked neck pre-mRNA splicing factor 1
CRTC1 CREB regulated transcription coactivator 1
CRYZ crystallin, zeta (quinone reductase)
CUEDC2 CUE domain containing 2
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase)
DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DTNA dystrobrevin, alpha
EXOSC1 exosome component 1
FERMT3 fermitin family member 3
FLVCR1 feline leukemia virus subgroup C cellular receptor 1
GAMT guanidinoacetate N-methyltransferase
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GOLPH3L golgi phosphoprotein 3-like
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
IPO8 importin 8
IQGAP3 IQ motif containing GTPase activating protein 3
IQSEC1 IQ motif and Sec7 domain 1
ITCH itchy E3 ubiquitin protein ligase
KAT8 K(lysine) acetyltransferase 8
KIF1BP KIF1 binding protein
KIF22 kinesin family member 22
KMT2A lysine (K)-specific methyltransferase 2A
LMAN2L lectin, mannose-binding 2-like
LOC101927523 uncharacterized LOC101927523
LOC105369971 vegetative cell wall protein gp1-like
LRRC20 leucine rich repeat containing 20
LRRC27 leucine rich repeat containing 27
LYRM7 LYR motif containing 7
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MARK3 MAP/microtubule affinity-regulating kinase 3
MASTL microtubule associated serine/threonine kinase-like
MFAP1 microfibrillar-associated protein 1
MIB1 mindbomb E3 ubiquitin protein ligase 1
MORC2 MORC family CW-type zinc finger 2
MPHOSPH8 M-phase phosphoprotein 8
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCOA7 nuclear receptor coactivator 7
NKPD1 NTPase, KAP family P-loop domain containing 1
NNMT nicotinamide N-methyltransferase
NOP9 NOP9 nucleolar protein
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NUF2 NUF2, NDC80 kinetochore complex component
OSBPL3 oxysterol binding protein-like 3
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
PNP purine nucleoside phosphorylase
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PRC1 protein regulator of cytokinesis 1
PRDM15 PR domain containing 15
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta
PTK7 protein tyrosine kinase 7 (inactive)
PTP4A1 protein tyrosine phosphatase type IVA, member 1
QPCT glutaminyl-peptide cyclotransferase
RAB4A RAB4A, member RAS oncogene family
RHOXF1 Rhox homeobox family, member 1
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
RP9 retinitis pigmentosa 9 (autosomal dominant)
RWDD1 RWD domain containing 1
SCRN1 secernin 1
SETD2 SET domain containing 2
SLBP stem-loop binding protein
SMC6 structural maintenance of chromosomes 6
SMG5 SMG5 nonsense mediated mRNA decay factor
SPATA5L1 spermatogenesis associated 5-like 1
SPIN1 spindlin 1
SRBD1 S1 RNA binding domain 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SSBP2 single-stranded DNA binding protein 2
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TGFB1 transforming growth factor, beta 1
TJP2 tight junction protein 2
TK2 thymidine kinase 2, mitochondrial
TMA7 translation machinery associated 7 homolog (S. cerevisiae)
TMEM65 transmembrane protein 65
TTC4 tetratricopeptide repeat domain 4
UBE4B ubiquitination factor E4B
USF2 upstream transcription factor 2, c-fos interacting
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2)
WRAP53 WD repeat containing, antisense to TP53
ZGPAT zinc finger, CCCH-type with G patch domain