COR-L23 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma, large cell (Cell Line Ontology, CLO_0002585)
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Genes

93 genes with high or low copy number in COR-L23 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SNORA7B small nucleolar RNA, H/ACA box 7B 4.51153
PLXND1 plexin D1 4.51153
MBD4 methyl-CpG binding domain protein 4 4.51153
IFT122 intraflagellar transport 122 4.51153
H1FOO H1 histone family, member O, oocyte-specific 4.51153
RHO rhodopsin 4.51153
H1FX-AS1 H1FX antisense RNA 1 4.51153
H1FX H1 histone family, member X 4.51153
RPL32P3 ribosomal protein L32 pseudogene 3 4.51153
EFCAB12 EF-hand calcium binding domain 12 4.51153
CNBP CCHC-type zinc finger, nucleic acid binding protein 3.12177
ISY1-RAB43 ISY1-RAB43 readthrough 3.12177
TMCC1 transmembrane and coiled-coil domain family 1 3.12177
GP9 glycoprotein IX (platelet) 3.12177
RAB43 RAB43, member RAS oncogene family 3.12177
ISY1 ISY1 splicing factor homolog (S. cerevisiae) 3.12177
TRH thyrotropin-releasing hormone 3.12177
COPG1 coatomer protein complex, subunit gamma 1 3.12177
C3ORF22 chromosome 3 open reading frame 22 2.93899
C3ORF56 chromosome 3 open reading frame 56 2.93899
DNAJB8-AS1 DNAJB8 antisense RNA 1 2.93899
ALDH1L1-AS2 ALDH1L1 antisense RNA 2 2.93899
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8 2.93899
LOC90246 uncharacterized LOC90246 2.93899
RAB7A RAB7A, member RAS oncogene family 2.93899
CCDC37 coiled-coil domain containing 37 2.93899
ACAD9 acyl-CoA dehydrogenase family, member 9 2.93899
RUVBL1 RuvB-like AAA ATPase 1 2.93899
SNORA24 small nucleolar RNA, H/ACA box 24 2.93899
EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific 2.93899
PLXNA1 plexin A1 2.93899
MCM2 minichromosome maintenance complex component 2 2.93899
UROC1 urocanate hydratase 1 2.93899
ZXDC ZXD family zinc finger C 2.93899
TXNRD3 thioredoxin reductase 3 2.93899
GATA2 GATA binding protein 2 2.93899
KIAA1257 KIAA1257 2.93899
CHST13 carbohydrate (chondroitin 4) sulfotransferase 13 2.93899
RPN1 ribophorin I 2.93899
NUP210P1 nucleoporin 210kDa pseudogene 1 2.93899
TPRA1 transmembrane protein, adipocyte asscociated 1 2.93899
CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6 2.93899
EFCC1 EF-hand and coiled-coil domain containing 1 2.93899
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 2.93899
MUC13 mucin 13, cell surface associated 2.93899
ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 2.93899
TXNRD3NB thioredoxin reductase 3 neighbor 2.93899
KBTBD12 kelch repeat and BTB (POZ) domain containing 12 2.93899
KLF15 Kruppel-like factor 15 2.93899
LOC653712 intraflagellar transport 122 homolog (Chlamydomonas) pseudogene 2.93899
PODXL2 podocalyxin-like 2 2.93899
LINC01565 long intergenic non-protein coding RNA 1565 2.93899
MGLL monoglyceride lipase 2.93899
ITGB5 integrin, beta 5 2.93899
ALDH1L1-AS1 ALDH1L1 antisense RNA 1 2.76305
SLC12A8 solute carrier family 12, member 8 2.76305
SLC41A3 solute carrier family 41, member 3 2.76305
MIR5092 microRNA 5092 2.76305
SNX4 sorting nexin 4 2.76305
ZNF148 zinc finger protein 148 2.76305
ALDH1L1 aldehyde dehydrogenase 1 family, member L1 2.76305
HEG1 heart development protein with EGF-like domains 1 2.76305
MIR548I1 microRNA 548i-1 2.64759
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2.64759
OSBPL11 oxysterol binding protein-like 11 2.64759
ROPN1B rhophilin associated tail protein 1B 2.64759
FAM86JP family with sequence similarity 86, member A pseudogene 2.64759
TSPAN9 tetraspanin 9 2.59653
TULP3 tubby like protein 3 2.59653
TEAD4 TEA domain family member 4 2.59653
FGF23 fibroblast growth factor 23 2.44392
CCND2 cyclin D2 2.41451
TIGAR TP53 induced glycolysis regulatory phosphatase 2.41451
LINC00861 long intergenic non-protein coding RNA 861 2.15967
FAM84B family with sequence similarity 84, member B 2.15847
PARP11 poly (ADP-ribose) polymerase family, member 11 2.09431
PRMT8 protein arginine methyltransferase 8 2.09431
MIR1206 microRNA 1206 2.07612
MIR1205 microRNA 1205 2.07136
MIR1207 microRNA 1207 2.07136
TMEM75 transmembrane protein 75 2.06401
CCAT1 colon cancer associated transcript 1 (non-protein coding) 2.0614
POU5F1B POU class 5 homeobox 1B 2.05836
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 2.05661
RASSF8-AS1 RASSF8 atnisense RNA 1 2.05661
MIR4302 microRNA 4302 2.05635
LYRM5 LYR motif containing 5 2.0521
CASC1 cancer susceptibility candidate 1 2.0521
KRAS Kirsten rat sarcoma viral oncogene homolog 2.05093
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -3.24687
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2 -2.73329