CP21R7_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description CP21R7 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the CP21R7_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.219297
ERRFI1 ERBB receptor feedback inhibitor 1 0.151931
AKAP12 A kinase (PRKA) anchor protein 12 0.149602
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.139184
FN1 fibronectin 1 0.131526
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.106575
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0929536
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0898319
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0787889
EHBP1 EH domain binding protein 1 0.0764113
ENO1 enolase 1, (alpha) 0.0678297
SVIL supervillin 0.0531927
DSPP dentin sialophosphoprotein 0.0472793
TMSB10 thymosin beta 10 0.0418862
GPC6 glypican 6 0.0410689
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0400934
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0389752
ASPH aspartate beta-hydroxylase 0.0383736
CCL20 chemokine (C-C motif) ligand 20 0.0367924
MAML2 mastermind-like 2 (Drosophila) 0.0363594
SLC38A2 solute carrier family 38, member 2 0.0359643
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0353279
TF transferrin 0.0333622
APOB apolipoprotein B 0.0319165
SAMD4A sterile alpha motif domain containing 4A 0.0307928
FAM107B family with sequence similarity 107, member B 0.0294003
LDHA lactate dehydrogenase A 0.0288899
NPAS2 neuronal PAS domain protein 2 0.0286628
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0285232
SESTD1 SEC14 and spectrin domains 1 0.0281101
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0275727
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0270474
TIMP1 TIMP metallopeptidase inhibitor 1 0.0268935
MACF1 microtubule-actin crosslinking factor 1 0.0266894
NSUN6 NOP2/Sun domain family, member 6 0.0266467
HMGA1 high mobility group AT-hook 1 0.0260241
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.025978
EEF2 eukaryotic translation elongation factor 2 0.0250071
GMDS GDP-mannose 4,6-dehydratase 0.0246393
PEG3 paternally expressed 3 0.0245625
ZEB1 zinc finger E-box binding homeobox 1 0.024336
FOXP1 forkhead box P1 0.0240619
C3 complement component 3 0.0239599
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0238737
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0230747
NKD1 naked cuticle homolog 1 (Drosophila) 0.022998
RAI14 retinoic acid induced 14 0.0227737
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0219961
PPARD peroxisome proliferator-activated receptor delta 0.0213639
DSTN destrin (actin depolymerizing factor) 0.0212211
LIMS1 LIM and senescent cell antigen-like domains 1 0.0208771
ZBTB38 zinc finger and BTB domain containing 38 0.0200112
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0199093
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0197981
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.019587
FAT1 FAT atypical cadherin 1 0.0195367
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.019149
GCLC glutamate-cysteine ligase, catalytic subunit 0.0189596
DIAPH1 diaphanous-related formin 1 0.0189535
MYH9 myosin, heavy chain 9, non-muscle 0.0188256
PDLIM5 PDZ and LIM domain 5 0.0187922
MALRD1 MAM and LDL receptor class A domain containing 1 0.0186953
MBNL2 muscleblind-like splicing regulator 2 0.0186766
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0185375
KIF5B kinesin family member 5B 0.0184318
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0178891
ATXN1 ataxin 1 0.0174356
KYNU kynureninase 0.0173149
PRELID2 PRELI domain containing 2 0.0170677
TXNIP thioredoxin interacting protein 0.0170317
PKM pyruvate kinase, muscle 0.0168042
ARL5B ADP-ribosylation factor-like 5B 0.0167261
BCL2L1 BCL2-like 1 0.0165869
RASA2 RAS p21 protein activator 2 0.016474
LOC112694756 uncharaterized LOC112694756 0.0164686
CRADD CASP2 and RIPK1 domain containing adaptor with death domain 0.016351
USP6NL USP6 N-terminal like 0.0161487
AGO2 argonaute RISC catalytic component 2 0.0160879
DSCAM Down syndrome cell adhesion molecule 0.0160471
GK glycerol kinase 0.0157805
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.0157273
ZFP36L1 ZFP36 ring finger protein-like 1 0.0156672
FILIP1L filamin A interacting protein 1-like 0.0156649
PDGFB platelet-derived growth factor beta polypeptide 0.0154765
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0154041
FERMT1 fermitin family member 1 0.0152735
BCAR3 breast cancer anti-estrogen resistance 3 0.0152104
IPO7 importin 7 0.0151931
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0149431
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0148799
CDK13 cyclin-dependent kinase 13 0.014861
KLF6 Kruppel-like factor 6 0.0146102
SIK3 SIK family kinase 3 0.0145001
JAG1 jagged 1 0.0144523
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0142967
RACK1 receptor for activated C kinase 1 0.0141658
CAPZB capping protein (actin filament) muscle Z-line, beta 0.0141303
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.014106
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0140993
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0140031

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0763203
RPL37A ribosomal protein L37a -0.043511
IGFBP1 insulin-like growth factor binding protein 1 -0.0310526
RPS27A ribosomal protein S27a -0.0293922
DDIT4 DNA-damage-inducible transcript 4 -0.0263646
HSPA1A heat shock 70kDa protein 1A -0.0251708
RBM39 RNA binding motif protein 39 -0.0242028
GPC3 glypican 3 -0.0227047
PTPRM protein tyrosine phosphatase, receptor type, M -0.0226941
PTCHD4 patched domain containing 4 -0.0224119
RPL9 ribosomal protein L9 -0.0222556
RPL31 ribosomal protein L31 -0.0215002
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0200795
RPS12 ribosomal protein S12 -0.0200036
APOA2 apolipoprotein A-II -0.0198693
RPS24 ribosomal protein S24 -0.0197057
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0190214
APOE apolipoprotein E -0.0189611
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0189536
RRBP1 ribosome binding protein 1 -0.0179329
IER3 immediate early response 3 -0.017362
UBC ubiquitin C -0.017141
TRIM26 tripartite motif containing 26 -0.0163743
FUS FUS RNA binding protein -0.0163086
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0160861
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0158994
NIPBL Nipped-B homolog (Drosophila) -0.0158667
RPS6 ribosomal protein S6 -0.0154181
GNAS GNAS complex locus -0.0154151
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0148177
RPL23 ribosomal protein L23 -0.0146896
RNF213 ring finger protein 213 -0.0146815
RPS16 ribosomal protein S16 -0.0144109
WSB1 WD repeat and SOCS box containing 1 -0.0143255
PNISR PNN-interacting serine/arginine-rich protein -0.0141743
SOD2 superoxide dismutase 2, mitochondrial -0.0140986
RPL13A ribosomal protein L13a -0.014042
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0139105
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0137952
RPL38 ribosomal protein L38 -0.0136512
RPL36A ribosomal protein L36a -0.0136446
ACYP2 acylphosphatase 2, muscle type -0.0130767
RPL27 ribosomal protein L27 -0.0130498
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0128773
ENO2 enolase 2 (gamma, neuronal) -0.0128591
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0126356
ZC3H13 zinc finger CCCH-type containing 13 -0.0126225
H3-3B H3.3 histone B -0.0124027
EEF1G eukaryotic translation elongation factor 1 gamma -0.0122789
KMT2A lysine (K)-specific methyltransferase 2A -0.0121621
RPL28 ribosomal protein L28 -0.011897
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.0116497
HLA-A major histocompatibility complex, class I, A -0.0115148
HSPG2 heparan sulfate proteoglycan 2 -0.0115073
RPL35A ribosomal protein L35a -0.0114823
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0113786
CALD1 caldesmon 1 -0.0113686
IFI6 interferon, alpha-inducible protein 6 -0.0111477
OLA1 Obg-like ATPase 1 -0.0110398
PHACTR4 phosphatase and actin regulator 4 -0.011021
SRSF11 serine/arginine-rich splicing factor 11 -0.0110176
ETFB electron-transfer-flavoprotein, beta polypeptide -0.0109797
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0109506
BRD2 bromodomain containing 2 -0.0108783
MFSD12 major facilitator superfamily domain containing 12 -0.0107994
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0107941
DLG1 discs, large homolog 1 (Drosophila) -0.0107528
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0106392
MT2A metallothionein 2A -0.0106038
CCND1 cyclin D1 -0.0105393
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0104321
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0104052
PTMA prothymosin, alpha -0.0103138
KPNB1 karyopherin (importin) beta 1 -0.0102858
TMEM245 transmembrane protein 245 -0.010257
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0102158
ATP5F1B ATP synthase F1 subunit beta -0.0102008
ADNP activity-dependent neuroprotector homeobox -0.010159
RPL7A ribosomal protein L7a -0.0101325
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0100289
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.00997117
CAMTA1 calmodulin binding transcription activator 1 -0.00994046
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 -0.00990191
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.00986599
NDRG1 N-myc downstream regulated 1 -0.00975507
NUP153 nucleoporin 153kDa -0.00966129
N4BP2L2 NEDD4 binding protein 2-like 2 -0.009659
LAMA4 laminin, alpha 4 -0.00960192
SRSF10 serine/arginine-rich splicing factor 10 -0.00954903
DTNA dystrobrevin, alpha -0.00949173
RPS21 ribosomal protein S21 -0.00947424
KCNN4 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4 -0.00944621
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.00944079
FGFR2 fibroblast growth factor receptor 2 -0.00942463
KDM6A lysine (K)-specific demethylase 6A -0.00940394
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 -0.00935833
HSPB1 heat shock 27kDa protein 1 -0.00935295
FBXL20 F-box and leucine-rich repeat protein 20 -0.00921712
CFB complement factor B -0.00918972
RPS25 ribosomal protein S25 -0.00918622