CP21R7_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description CP21R7 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the CP21R7_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.119509
MT2A metallothionein 2A 0.10407
FTH1 ferritin, heavy polypeptide 1 0.0819135
VEGFA vascular endothelial growth factor A 0.0715757
IL6 interleukin 6 0.070332
ERRFI1 ERBB receptor feedback inhibitor 1 0.0587944
NDRG1 N-myc downstream regulated 1 0.0581046
FAM13A family with sequence similarity 13, member A 0.0533724
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0493606
ARRDC3 arrestin domain containing 3 0.0449131
TRA2A transformer 2 alpha homolog (Drosophila) 0.0439977
MAP1B microtubule-associated protein 1B 0.0432178
PKM pyruvate kinase, muscle 0.0422384
KYNU kynureninase 0.0419256
FNDC3B fibronectin type III domain containing 3B 0.041842
AKAP12 A kinase (PRKA) anchor protein 12 0.0411316
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0408812
LDHA lactate dehydrogenase A 0.0391106
ZNF395 zinc finger protein 395 0.0390443
ELL2 elongation factor, RNA polymerase II, 2 0.0385931
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0382895
STC1 stanniocalcin 1 0.0382064
MATR3 matrin 3 0.0365219
MSN moesin 0.0358745
SRRM2 serine/arginine repetitive matrix 2 0.0338908
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0338854
CD44 CD44 molecule (Indian blood group) 0.0330887
DSCAM Down syndrome cell adhesion molecule 0.0318701
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0311823
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0311467
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.030342
MYH9 myosin, heavy chain 9, non-muscle 0.0302332
FOSL1 FOS-like antigen 1 0.0289138
RND3 Rho family GTPase 3 0.0272046
ZNF292 zinc finger protein 292 0.0267538
EEF2 eukaryotic translation elongation factor 2 0.0263591
GSE1 Gse1 coiled-coil protein 0.0259146
LOC112694756 uncharaterized LOC112694756 0.0256419
FXR1 fragile X mental retardation, autosomal homolog 1 0.0245931
RPS4X ribosomal protein S4, X-linked 0.0244156
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0244013
NAMPT nicotinamide phosphoribosyltransferase 0.0243026
RIOK3 RIO kinase 3 0.0242793
WDR43 WD repeat domain 43 0.0240646
TNIP1 TNFAIP3 interacting protein 1 0.0239508
SCAF8 SR-related CTD-associated factor 8 0.0234657
TLN1 talin 1 0.0232502
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0231502
CCDC14 coiled-coil domain containing 14 0.0231299
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0228633
TANK TRAF family member-associated NFKB activator 0.0228098
METTL15 methyltransferase like 15 0.0224622
ANTXR2 anthrax toxin receptor 2 0.0224249
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0224046
PDE4D phosphodiesterase 4D, cAMP-specific 0.0223645
SOD2 superoxide dismutase 2, mitochondrial 0.0220103
ECE1 endothelin converting enzyme 1 0.0220029
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.022002
PCBP2 poly(rC) binding protein 2 0.0219548
SEM1 SEM1 26S proteasome subunit 0.0215893
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0214956
NBAS neuroblastoma amplified sequence 0.0212667
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0212067
MYO10 myosin X 0.0212013
TIMP1 TIMP metallopeptidase inhibitor 1 0.020897
SH3RF3 SH3 domain containing ring finger 3 0.0208925
PRELID2 PRELI domain containing 2 0.0208431
ZNF451 zinc finger protein 451 0.0206174
BMERB1 bMERB domain containing 1 0.0206098
GMDS GDP-mannose 4,6-dehydratase 0.0205623
L1CAM L1 cell adhesion molecule 0.0205472
POTEF POTE ankyrin domain family, member F 0.0203985
RNF24 ring finger protein 24 0.0203985
AKAP9 A kinase (PRKA) anchor protein 9 0.020362
RPL3 ribosomal protein L3 0.0203144
DEPP1 DEPP autophagy regulator 1 0.0202946
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0201423
CDC27 cell division cycle 27 0.0200628
BRD2 bromodomain containing 2 0.020054
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0197407
PRRC2C proline-rich coiled-coil 2C 0.0196926
ANXA5 annexin A5 0.0196725
PTPRA protein tyrosine phosphatase, receptor type, A 0.0196513
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0196042
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0194507
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.019434
HPS3 Hermansky-Pudlak syndrome 3 0.0193999
ZNF148 zinc finger protein 148 0.019322
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0190363
LGALS3 lectin, galactoside-binding, soluble, 3 0.0190105
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.018885
TNS3 tensin 3 0.0188057
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0187854
VEGFC vascular endothelial growth factor C 0.0187462
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0186138
OAF OAF homolog (Drosophila) 0.0185191
RAB8B RAB8B, member RAS oncogene family 0.018505
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0184256
TTYH3 tweety family member 3 0.0183096
CBX3 chromobox homolog 3 0.0182349

decreased expression

Symbol Name Standardized Value
TGFBI transforming growth factor, beta-induced, 68kDa -0.164132
COL1A1 collagen, type I, alpha 1 -0.161683
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.126133
COL1A2 collagen, type I, alpha 2 -0.109513
HLA-B major histocompatibility complex, class I, B -0.105719
LOX lysyl oxidase -0.0856499
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0856392
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0756822
HLA-C major histocompatibility complex, class I, C -0.0642175
FN1 fibronectin 1 -0.0626274
PSD3 pleckstrin and Sec7 domain containing 3 -0.0597465
VIM vimentin -0.0559347
CAVIN1 caveolae associated protein 1 -0.055514
TPT1 tumor protein, translationally-controlled 1 -0.0545727
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0522568
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0486737
TMSB10 thymosin beta 10 -0.0485602
TPM4 tropomyosin 4 -0.0481293
COL3A1 collagen, type III, alpha 1 -0.0470106
COL6A1 collagen, type VI, alpha 1 -0.0441049
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0436892
CALU calumenin -0.041889
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0411133
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0390383
COL6A3 collagen, type VI, alpha 3 -0.0388712
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0367868
CALR calreticulin -0.0362512
B2M beta-2-microglobulin -0.0359088
CDH13 cadherin 13 -0.0354556
AHNAK AHNAK nucleoprotein -0.0341846
PDIA4 protein disulfide isomerase family A, member 4 -0.0324997
GNAS GNAS complex locus -0.0320917
JMJD1C jumonji domain containing 1C -0.0320325
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0318831
PTMA prothymosin, alpha -0.0313897
FKBP10 FK506 binding protein 10, 65 kDa -0.0307822
TMEM263 transmembrane protein 263 -0.0307722
BIRC6 baculoviral IAP repeat containing 6 -0.0304374
COL6A2 collagen, type VI, alpha 2 -0.0299256
ANKRD11 ankyrin repeat domain 11 -0.0298966
WSB1 WD repeat and SOCS box containing 1 -0.0296858
RRBP1 ribosome binding protein 1 -0.0296333
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0287889
EXT1 exostosin glycosyltransferase 1 -0.0276913
RPL34 ribosomal protein L34 -0.0276359
ZFAND3 zinc finger, AN1-type domain 3 -0.0272894
GCC2 GRIP and coiled-coil domain containing 2 -0.027255
AUTS2 autism susceptibility candidate 2 -0.0272034
S100A10 S100 calcium binding protein A10 -0.0270821
SLC38A2 solute carrier family 38, member 2 -0.0265964
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.0263882
SIL1 SIL1 nucleotide exchange factor -0.0263454
PGK1 phosphoglycerate kinase 1 -0.0259875
RPS13 ribosomal protein S13 -0.0259544
TNNC1 troponin C type 1 (slow) -0.0257219
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0255434
CDK12 cyclin-dependent kinase 12 -0.0252775
VDAC1 voltage-dependent anion channel 1 -0.0251634
RPS23 ribosomal protein S23 -0.0246336
COPB1 coatomer protein complex, subunit beta 1 -0.0245759
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0245375
SPDYA speedy/RINGO cell cycle regulator family member A -0.0241425
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0240398
TMEM41B transmembrane protein 41B -0.0240357
PLCB4 phospholipase C, beta 4 -0.0239775
EGFR epidermal growth factor receptor -0.0238956
NUP98 nucleoporin 98kDa -0.0237448
RPS29 ribosomal protein S29 -0.0233462
OXR1 oxidation resistance 1 -0.0231585
SEC24D SEC24 family member D -0.0231208
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0230441
DSTN destrin (actin depolymerizing factor) -0.0228707
CAPN2 calpain 2, (m/II) large subunit -0.0228382
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0228082
ENO2 enolase 2 (gamma, neuronal) -0.0227337
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0225892
RPS24 ribosomal protein S24 -0.0225805
CDK6 cyclin-dependent kinase 6 -0.0224728
PDIA5 protein disulfide isomerase family A, member 5 -0.0223854
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.0220594
TNPO1 transportin 1 -0.022034
KIF1B kinesin family member 1B -0.0216224
ERBIN erbb2 interacting protein -0.021544
CANX calnexin -0.0214733
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0213315
SAR1A secretion associated, Ras related GTPase 1A -0.0212285
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0212023
ATG7 autophagy related 7 -0.0211306
PRKCA protein kinase C, alpha -0.0209706
CTSB cathepsin B -0.0208908
SLIT2 slit homolog 2 (Drosophila) -0.0207727
FBXO11 F-box protein 11 -0.0205097
FLOT1 flotillin 1 -0.0204821
DMXL1 Dmx-like 1 -0.02043
RPL37A ribosomal protein L37a -0.020366
ZBTB38 zinc finger and BTB domain containing 38 -0.0202793
GPR173 G protein-coupled receptor 173 -0.0200623
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0199628
CKAP4 cytoskeleton-associated protein 4 -0.0199222
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0197969