CRCGN008_HEPG2_24H:G18 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description withaferin-a 0.62 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

111 genes differentially expressed following the CRCGN008_HEPG2_24H:G18 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
PHKA1 phosphorylase kinase, alpha 1 (muscle) 6.32615
SQOR sulfide quinone oxidoreductase 5.39655
TXNRD1 thioredoxin reductase 1 5.38225
AMDHD2 amidohydrolase domain containing 2 5.34405
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 5.2665
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 5.20595
HLA-DMA major histocompatibility complex, class II, DM alpha 5.15595
TIMP2 TIMP metallopeptidase inhibitor 2 4.96105
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.7595
INTS3 integrator complex subunit 3 4.576
UGDH UDP-glucose 6-dehydrogenase 4.45655
MYLK myosin light chain kinase 4.41735
CDCA4 cell division cycle associated 4 4.3938
ABHD4 abhydrolase domain containing 4 4.21635
GPER1 G protein-coupled estrogen receptor 1 3.8426
PARP2 poly (ADP-ribose) polymerase 2 3.76355
HSPA1A heat shock 70kDa protein 1A 3.62405
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 3.33295
CYCS cytochrome c, somatic 3.2855
TXNL4B thioredoxin-like 4B 3.2576
PACSIN3 protein kinase C and casein kinase substrate in neurons 3 3.2368
EVL Enah/Vasp-like 3.07635
H2BC12 H2B clustered histone 12 2.931
SQSTM1 sequestosome 1 2.80963
IFNAR1 interferon (alpha, beta and omega) receptor 1 2.6745
LYPLA1-TCEA1 LYPLA1-TCEA1 readthrough 2.66945
TMEM109 transmembrane protein 109 2.6369
TBPL1 TBP-like 1 2.56775
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 2.53035
ANO1 anoctamin 1, calcium activated chloride channel 2.4558
TATDN2 TatD DNase domain containing 2 2.378
ZMPSTE24 zinc metallopeptidase STE24 2.35835
RASAL2 RAS protein activator like 2 2.3035
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 2.29285
BAD BCL2-associated agonist of cell death 2.28197
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 2.2525
QTRT1 queuine tRNA-ribosyltransferase 1 2.23885
HSPH1 heat shock 105kDa/110kDa protein 1 2.23257
HMOX1 heme oxygenase 1 2.209
TMEM50A transmembrane protein 50A 2.19175
FOSL1 FOS-like antigen 1 2.1871
NOP14 NOP14 nucleolar protein 2.17765
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2.1731
ALAS1 5'-aminolevulinate synthase 1 2.1413
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 2.14
SAFB scaffold attachment factor B 2.11548
PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 2.11545
LUC7L LUC7-like (S. cerevisiae) 2.08545
PPARG peroxisome proliferator-activated receptor gamma 2.07935
BARX1 BARX homeobox 1 2.02895
NUP98 nucleoporin 98kDa 2.0213
PLSCR3 phospholipid scramblase 3 2.01813
SPDL1 spindle apparatus coiled-coil protein 1 2.00865
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 2.00645

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -10.0
CCNB2 cyclin B2 -8.95635
C5 complement component 5 -5.51
NT5DC2 5'-nucleotidase domain containing 2 -5.35235
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -5.22075
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -5.0
LDHD lactate dehydrogenase D -4.97675
TLCD3A TLC domain containing 3A -4.96105
ISOC1 isochorismatase domain containing 1 -4.915
VAT1 vesicle amine transport 1 -4.8738
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -4.84395
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) -4.4088
FGFR4 fibroblast growth factor receptor 4 -4.3743
DHRS7 dehydrogenase/reductase (SDR family) member 7 -4.0696
FASTKD5 FAST kinase domains 5 -3.92165
SACM1L SAC1 suppressor of actin mutations 1-like (yeast) -3.4959
PRPF4 pre-mRNA processing factor 4 -3.4498
DCK deoxycytidine kinase -3.32465
CCNB1 cyclin B1 -3.1973
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -3.1606
OXA1L oxidase (cytochrome c) assembly 1-like -2.903
FBXO7 F-box protein 7 -2.84625
CRK v-crk avian sarcoma virus CT10 oncogene homolog -2.84292
CASP7 caspase 7, apoptosis-related cysteine peptidase -2.81275
COG2 component of oligomeric golgi complex 2 -2.7715
CTNND1 catenin (cadherin-associated protein), delta 1 -2.74227
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -2.68365
NLRP4 NLR family, pyrin domain containing 4 -2.5013
DIXDC1 DIX domain containing 1 -2.4925
ERBB2 erb-b2 receptor tyrosine kinase 2 -2.42933
TMEM165 transmembrane protein 165 -2.33955
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -2.30443
PLS1 plastin 1 -2.28015
H2AZ1 H2A.Z variant histone 1 -2.27017
C1GALT1C1 C1GALT1-specific chaperone 1 -2.26375
PCCB propionyl CoA carboxylase, beta polypeptide -2.2518
RPL10A ribosomal protein L10a -2.2466
AZGP1 alpha-2-glycoprotein 1, zinc-binding -2.19035
PEX11B peroxisomal biogenesis factor 11 beta -2.18675
TMEM184C transmembrane protein 184C -2.18475
B4GAT1 beta-1,4-glucuronyltransferase 1 -2.1771
ACP3 acid phosphatase 3 -2.16715
NSFL1C NSFL1 (p97) cofactor (p47) -2.1609
MSRA methionine sulfoxide reductase A -2.13725
FBXL12 F-box and leucine-rich repeat protein 12 -2.1107
TFB1M transcription factor B1, mitochondrial -2.10745
CATSPER2 cation channel, sperm associated 2 -2.0873
DDRGK1 DDRGK domain containing 1 -2.08165
FTSJ3 FtsJ homolog 3 (E. coli) -2.07415
TCIM transcriptional and immune response regulator -2.06865
MIS18BP1 MIS18 binding protein 1 -2.05885
GDF15 growth differentiation factor 15 -2.04505
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2 -2.03175
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) -2.02988
ADIRF adipogenesis regulatory factor -2.02085
SHPK sedoheptulokinase -2.01195
POM121 POM121 transmembrane nucleoporin -2.0016