CRCGN008_HEPG2_24H:M20 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description ampicillin 17.0 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

106 genes differentially expressed following the CRCGN008_HEPG2_24H:M20 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
STK10 serine/threonine kinase 10 5.4628
CGRRF1 cell growth regulator with ring finger domain 1 5.3034
HLA-DMA major histocompatibility complex, class II, DM alpha 5.29115
GFOD1 glucose-fructose oxidoreductase domain containing 1 5.07595
E2F2 E2F transcription factor 2 4.8812
FZD7 frizzled class receptor 7 4.785
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 4.7127
SMIM40 small integral membrane protein 40 4.45235
SNAP25 synaptosomal-associated protein, 25kDa 4.43453
EGF epidermal growth factor 4.29425
HLA-DRA major histocompatibility complex, class II, DR alpha 4.02283
KCNK1 potassium channel, two pore domain subfamily K, member 1 3.8251
VGLL4 vestigial-like family member 4 3.36622
SRC SRC proto-oncogene, non-receptor tyrosine kinase 3.19015
STIMATE STIM activating enhancer 2.91775
EVL Enah/Vasp-like 2.8264
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 2.826
HLA-DRB3 major histocompatibility complex, class II, DR beta 3 2.7549
CHN1 chimerin 1 2.7518
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 2.68755
GPATCH8 G patch domain containing 8 2.63415
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 2.5749
CTSL cathepsin L 2.4904
VCAM1 vascular cell adhesion molecule 1 2.4598
CCNH cyclin H 2.45155
TAC4 tachykinin 4 (hemokinin) 2.43555
BBX bobby sox homolog (Drosophila) 2.43033
NOSIP nitric oxide synthase interacting protein 2.40545
CHEK2 checkpoint kinase 2 2.26303
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 2.2472
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 2.23525
YTHDF1 YTH N(6)-methyladenosine RNA binding protein 1 2.21005
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta 2.1937
RETREG3 reticulophagy regulator family member 3 2.18815
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 2.1692
GABARAPL2 GABA(A) receptor-associated protein-like 2 2.16495
TRMT13 tRNA methyltransferase 13 homolog (S. cerevisiae) 2.15825
HSPA1A heat shock 70kDa protein 1A 2.1413
LSP1 lymphocyte-specific protein 1 2.14115
CEP57 centrosomal protein 57kDa 2.12417
YIF1A Yip1 interacting factor homolog A (S. cerevisiae) 2.1202
COL11A1 collagen, type XI, alpha 1 2.10858
MKNK1 MAP kinase interacting serine/threonine kinase 1 2.10535
NCAPH non-SMC condensin I complex, subunit H 2.0912
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 2.08805
RHD Rh blood group, D antigen 2.0708
TMEM39A transmembrane protein 39A 2.06685
BTN2A2 butyrophilin, subfamily 2, member A2 2.06605
LTF lactotransferrin 2.0381
WT1 Wilms tumor 1 2.0293
CUZD1 CUB and zona pellucida-like domains 1 2.0289
NSUN5 NOP2/Sun domain family, member 5 2.02367
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 2.0232
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 2.0027

decreased expression

Symbol Name Standardized Value
CASP7 caspase 7, apoptosis-related cysteine peptidase -8.05555
OXA1L oxidase (cytochrome c) assembly 1-like -6.49935
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -4.883
ENOPH1 enolase-phosphatase 1 -4.7717
PCNA proliferating cell nuclear antigen -4.6007
C2CD5 C2 calcium-dependent domain containing 5 -4.5886
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -4.42945
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -4.4123
MTFR1 mitochondrial fission regulator 1 -4.21265
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -4.053
GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 -3.8534
GDF15 growth differentiation factor 15 -3.42035
MAPK13 mitogen-activated protein kinase 13 -3.1374
SNX11 sorting nexin 11 -2.9066
CRK v-crk avian sarcoma virus CT10 oncogene homolog -2.8479
CAB39 calcium binding protein 39 -2.80485
EVA1B eva-1 homolog B (C. elegans) -2.78665
COXFA4L2 cytochrome c oxidase hypoxia associated subunit FA4L2 -2.7425
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 -2.6999
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2 -2.62955
PUDP pseudouridine 5'-phosphatase -2.52155
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 -2.49365
NUP54 nucleoporin 54kDa -2.4139
YY1AP1 YY1 associated protein 1 -2.3619
TRPM4 transient receptor potential cation channel, subfamily M, member 4 -2.3097
ZNF358 zinc finger protein 358 -2.29065
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase -2.28665
MTMR6 myotubularin related protein 6 -2.26175
CHEK1 checkpoint kinase 1 -2.2564
AVL9 AVL9 homolog (S. cerevisiase) -2.25177
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16 -2.24685
PIAS3 protein inhibitor of activated STAT, 3 -2.21025
STS steroid sulfatase (microsomal), isozyme S -2.16878
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -2.1484
LY96 lymphocyte antigen 96 -2.1292
EBI3 Epstein-Barr virus induced 3 -2.10975
PRR16 proline rich 16 -2.1054
EXOC3 exocyst complex component 3 -2.09485
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 -2.0882
SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1 -2.08215
DNASE1L1 deoxyribonuclease I-like 1 -2.08025
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2 -2.0764
POLR1E polymerase (RNA) I polypeptide E, 53kDa -2.0598
FAM13A family with sequence similarity 13, member A -2.05803
ITPRID2 ITPR interacting domain containing 2 -2.0555
MAOA monoamine oxidase A -2.04202
TFF3 trefoil factor 3 (intestinal) -2.0349
ETHE1 ethylmalonic encephalopathy 1 -2.01655
PLEKHA5 pleckstrin homology domain containing, family A member 5 -2.0123
LTK leukocyte receptor tyrosine kinase -2.00895
EPB41L4B erythrocyte membrane protein band 4.1 like 4B -2.0037
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit -2.00157