CRCGN008_HEPG2_24H:O11 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description beta-carotene 1.26 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

58 genes differentially expressed following the CRCGN008_HEPG2_24H:O11 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 4.92995
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.92485
ADGRE5 adhesion G protein-coupled receptor E5 4.9144
CDPF1 cysteine-rich, DPF motif domain containing 1 4.89435
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 4.8761
SSBP2 single-stranded DNA binding protein 2 4.33565
ARL4C ADP-ribosylation factor-like 4C 4.33243
PRR15L proline rich 15-like 4.29465
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 3.88245
GPER1 G protein-coupled estrogen receptor 1 3.7188
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 3.65195
VGLL4 vestigial-like family member 4 3.48238
CCDC85B coiled-coil domain containing 85B 3.44705
CHMP6 charged multivesicular body protein 6 3.15345
MAP7 microtubule-associated protein 7 3.08552
H2BC12 H2B clustered histone 12 2.89577
LOC122526780 uncharacterized LOC122526780 2.87555
ADAM10 ADAM metallopeptidase domain 10 2.82402
CCNF cyclin F 2.71722
LSR lipolysis stimulated lipoprotein receptor 2.40105
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 2.39988
ADAT1 adenosine deaminase, tRNA-specific 1 2.3048
WDTC1 WD and tetratricopeptide repeats 1 2.19412
SCHIP1 schwannomin interacting protein 1 2.1729
TLR4 toll-like receptor 4 2.10085
GPATCH8 G patch domain containing 8 2.08253
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 2.07395
AXIN1 axin 1 2.06675
DNAAF11 dynein axonemal assembly factor 11 2.04925
SIK2 salt-inducible kinase 2 2.0324

decreased expression

Symbol Name Standardized Value
TLCD3A TLC domain containing 3A -8.67465
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -5.1595
DHRS7 dehydrogenase/reductase (SDR family) member 7 -5.0582
VAT1 vesicle amine transport 1 -4.838
TSPAN4 tetraspanin 4 -4.74955
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) -4.38255
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -4.27845
CCNB2 cyclin B2 -3.9605
MAPK13 mitogen-activated protein kinase 13 -3.55717
CSNK1E casein kinase 1, epsilon -3.41687
TOR1A torsin family 1, member A (torsin A) -3.41223
ERC2 ELKS/RAB6-interacting/CAST family member 2 -2.99084
ANKRD10 ankyrin repeat domain 10 -2.81905
CLTB clathrin, light chain B -2.75785
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -2.66778
WASHC4 WASH complex subunit 4 -2.44905
CASP7 caspase 7, apoptosis-related cysteine peptidase -2.40095
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) -2.39262
HSPA8 heat shock 70kDa protein 8 -2.28622
FBXL12 F-box and leucine-rich repeat protein 12 -2.26815
CHRDL1 chordin-like 1 -2.2134
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -2.2091
PGM1 phosphoglucomutase 1 -2.08675
LIN7B lin-7 homolog B (C. elegans) -2.083
NRIP1 nuclear receptor interacting protein 1 -2.0676
RBM15B RNA binding motif protein 15B -2.0545
DAAM1 dishevelled associated activator of morphogenesis 1 -2.0533
ZNF274 zinc finger protein 274 -2.03805