CRCGN008_HEPG2_24H:O12 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description beta-carotene 0.63 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

42 genes differentially expressed following the CRCGN008_HEPG2_24H:O12 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 6.1812
MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 5.1486
JADE2 jade family PHD finger 2 5.0534
CXCL2 chemokine (C-X-C motif) ligand 2 5.0467
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 4.98065
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 4.82655
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 4.7875
PPARG peroxisome proliferator-activated receptor gamma 4.54145
ZFP36 ZFP36 ring finger protein 3.7785
TIAM1 T-cell lymphoma invasion and metastasis 1 3.01275
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 2.9523
SLC75A1 solute carrier family 75 member 1 2.7547
SSBP2 single-stranded DNA binding protein 2 2.69733
PIH1D1 PIH1 domain containing 1 2.683
CYCS cytochrome c, somatic 2.6266
FPGS folylpolyglutamate synthase 2.49685
NPDC1 neural proliferation, differentiation and control, 1 2.41625
PLSCR3 phospholipid scramblase 3 2.33978
TNIP1 TNFAIP3 interacting protein 1 2.2703
NOSIP nitric oxide synthase interacting protein 2.26975
SFTPB surfactant protein B 2.10253
LRRC8D leucine rich repeat containing 8 family, member D 2.02855

decreased expression

Symbol Name Standardized Value
FAIM Fas apoptotic inhibitory molecule -5.22815
CASP7 caspase 7, apoptosis-related cysteine peptidase -5.10685
CD320 CD320 molecule -4.9929
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -4.95415
MRPS2 mitochondrial ribosomal protein S2 -4.9349
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -4.85248
LDHD lactate dehydrogenase D -4.59515
NGRN neugrin, neurite outgrowth associated -4.5612
ICAM3 intercellular adhesion molecule 3 -3.3246
RFC2 replication factor C (activator 1) 2, 40kDa -3.11835
CLIC4 chloride intracellular channel 4 -3.00408
STAT1 signal transducer and activator of transcription 1, 91kDa -2.73352
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -2.59515
NR2F6 nuclear receptor subfamily 2, group F, member 6 -2.22808
H2BC6 H2B clustered histone 6 -2.18895
TSKU tsukushi, small leucine rich proteoglycan -2.07165
TLR1 toll-like receptor 1 -2.0672
PINK1 PTEN induced putative kinase 1 -2.05422
ANGPTL2 angiopoietin-like 2 -2.03798
H1-10 H1.10 linker histone -2.02155