CRCGN009_HEPG2_24H:C09 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description nitrobenzene 10.3 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

48 genes differentially expressed following the CRCGN009_HEPG2_24H:C09 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 10.0
RPL39L ribosomal protein L39-like 5.22904
BACE2 beta-site APP-cleaving enzyme 2 5.04221
CHMP6 charged multivesicular body protein 6 5.03377
CIAO3 cytosolic iron-sulfur assembly component 3 4.67321
HOXA10 homeobox A10 4.4035
LCN2 lipocalin 2 3.97762
PEX11A peroxisomal biogenesis factor 11 alpha 3.90363
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 3.8625
HSPA1A heat shock 70kDa protein 1A 3.53992
AXIN1 axin 1 3.36953
MAP7 microtubule-associated protein 7 3.23102
TIAM1 T-cell lymphoma invasion and metastasis 1 3.1412
SOCS2 suppressor of cytokine signaling 2 2.99631
NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 2.85858
NOSIP nitric oxide synthase interacting protein 2.82533
SYBU syntabulin (syntaxin-interacting) 2.49184
SIRT3 sirtuin 3 2.48087
EPHB2 EPH receptor B2 2.47316
CCNF cyclin F 2.3005
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 2.24386
CNTNAP1 contactin associated protein 1 2.18409
HOXA10-HOXA9 HOXA10-HOXA9 readthrough 2.15576
GATA3 GATA binding protein 3 2.15298
MRPL46 mitochondrial ribosomal protein L46 2.14957
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 2.08259
JADE2 jade family PHD finger 2 2.06838
HOXA11 homeobox A11 2.06073

decreased expression

Symbol Name Standardized Value
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -5.38332
PRPF4 pre-mRNA processing factor 4 -5.16365
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble -4.93942
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 -4.9007
CD58 CD58 molecule -4.6745
LDHD lactate dehydrogenase D -4.66677
PCNA proliferating cell nuclear antigen -4.6076
DSG2 desmoglein 2 -4.17744
NUP93 nucleoporin 93kDa -4.03085
ZNF586 zinc finger protein 586 -3.95581
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -3.88924
OXA1L oxidase (cytochrome c) assembly 1-like -3.60274
SNX11 sorting nexin 11 -3.09055
TXNDC9 thioredoxin domain containing 9 -2.4284
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) -2.40812
TLR4 toll-like receptor 4 -2.37947
CMTR1 cap methyltransferase 1 -2.21115
CCNB1 cyclin B1 -2.16808
NECTIN4 nectin cell adhesion molecule 4 -2.09546
TBC1D2 TBC1 domain family, member 2 -2.05805