CRCGN009_HEPG2_24H:G17 Gene Set

Dataset Carcinogenome Chemical Perturbation Carcinogenicity Signatures
Category transcriptomics
Type small molecule perturbation
Description withaferin-a 1.25 um perturbation at 24 h in HEPG2 (Carcinogenome)
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Genes

200 genes differentially expressed following the CRCGN009_HEPG2_24H:G17 small molecule perturbation from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.

increased expression

Symbol Name Standardized Value
ABHD4 abhydrolase domain containing 4 10.0
TXNRD1 thioredoxin reductase 1 8.70112
HMOX1 heme oxygenase 1 6.66768
H2BC12 H2B clustered histone 12 6.14294
CNPY3 canopy FGF signaling regulator 3 6.03886
RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) 5.87185
TMEM109 transmembrane protein 109 5.12418
FOSL1 FOS-like antigen 1 4.94008
DIPK1A divergent protein kinase domain 1A 4.77271
UGDH UDP-glucose 6-dehydrogenase 4.69532
SQSTM1 sequestosome 1 4.68213
BZW2 basic leucine zipper and W2 domains 2 4.67144
MSRA methionine sulfoxide reductase A 4.30269
MCOLN1 mucolipin 1 4.27624
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 4.16312
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 4.09586
HLA-DMA major histocompatibility complex, class II, DM alpha 4.07069
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 4.01786
ZW10 zw10 kinetochore protein 3.8473
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 3.66577
STIMATE STIM activating enhancer 3.64654
TUBB6 tubulin, beta 6 class V 3.62769
STK10 serine/threonine kinase 10 3.52331
TBPL1 TBP-like 1 3.4852
ALAS1 5'-aminolevulinate synthase 1 3.39458
MVP major vault protein 3.38354
PRR15L proline rich 15-like 3.336
KEAP1 kelch-like ECH-associated protein 1 3.27006
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa 3.20736
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa 3.20545
PLSCR3 phospholipid scramblase 3 3.1863
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 3.18071
DNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 2 3.13141
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 3.12583
TERF2IP telomeric repeat binding factor 2, interacting protein 3.07025
CBR1 carbonyl reductase 1 2.98739
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 2.95821
WDR7 WD repeat domain 7 2.9107
LCN2 lipocalin 2 2.86569
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 2.84241
GSTZ1 glutathione S-transferase zeta 1 2.84233
POPDC3 popeye domain containing 3 2.80979
HOXA10 homeobox A10 2.79658
BIRC2 baculoviral IAP repeat containing 2 2.79506
SMIM40 small integral membrane protein 40 2.76356
GPC1 glypican 1 2.75576
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2.75484
TMEM50A transmembrane protein 50A 2.7395
CTSL cathepsin L 2.737
RRAGA Ras-related GTP binding A 2.71522
PHKA1 phosphorylase kinase, alpha 1 (muscle) 2.69993
BLCAP bladder cancer associated protein 2.674
KLHL21 kelch-like family member 21 2.6364
SSH1 slingshot protein phosphatase 1 2.62634
PPARG peroxisome proliferator-activated receptor gamma 2.62395
TAC4 tachykinin 4 (hemokinin) 2.61882
TXNL4B thioredoxin-like 4B 2.58442
ADGRG1 adhesion G protein-coupled receptor G1 2.58255
H2BC21 H2B clustered histone 21 2.5784
TIAM1 T-cell lymphoma invasion and metastasis 1 2.56345
ADI1 acireductone dioxygenase 1 2.55247
OSGIN1 oxidative stress induced growth inhibitor 1 2.55194
DCAF6 DDB1 and CUL4 associated factor 6 2.47949
ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D 2.44512
RAB21 RAB21, member RAS oncogene family 2.44366
CHN1 chimerin 1 2.41734
GCLM glutamate-cysteine ligase, modifier subunit 2.38492
NR1H2 nuclear receptor subfamily 1, group H, member 2 2.3531
RAI14 retinoic acid induced 14 2.33088
DOK2 docking protein 2, 56kDa 2.30839
RIC8B RIC8 guanine nucleotide exchange factor B 2.29859
REEP5 receptor accessory protein 5 2.26821
PXMP2 peroxisomal membrane protein 2, 22kDa 2.2649
CNPY3-GNMT CNPY3-GNMT readthrough 2.25435
PPP1R13B protein phosphatase 1, regulatory subunit 13B 2.24669
HLA-DOB major histocompatibility complex, class II, DO beta 2.24511
KLHDC3 kelch domain containing 3 2.23394
TIMP2 TIMP metallopeptidase inhibitor 2 2.22289
SMN2 survival of motor neuron 2, centromeric 2.20955
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 2.20724
NOCT nocturnin 2.18541
LDLRAP1 low density lipoprotein receptor adaptor protein 1 2.16342
GARRE1 granule associated Rac and RHOG effector 1 2.14857
SP140 SP140 nuclear body protein 2.14132
CDPF1 cysteine-rich, DPF motif domain containing 1 2.13265
ERP29 endoplasmic reticulum protein 29 2.129
CCP110 centriolar coiled coil protein 110kDa 2.12503
ATP11B ATPase, class VI, type 11B 2.10367
UBR2 ubiquitin protein ligase E3 component n-recognin 2 2.10027
GMNN geminin, DNA replication inhibitor 2.0983
GADD45A growth arrest and DNA-damage-inducible, alpha 2.07596
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 2.06792
H2BC9 H2B clustered histone 9 2.06419
SOCS2 suppressor of cytokine signaling 2 2.06328
FRMPD1 FERM and PDZ domain containing 1 2.05935
BMP8B bone morphogenetic protein 8b 2.03142
UBE2L6 ubiquitin-conjugating enzyme E2L 6 2.02793
PIR pirin (iron-binding nuclear protein) 2.02614
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 2.02012
TREM2 triggering receptor expressed on myeloid cells 2 2.01714
JMJD6 jumonji domain containing 6 2.00805
SNAP25 synaptosomal-associated protein, 25kDa 2.00263

decreased expression

Symbol Name Standardized Value
PCNA proliferating cell nuclear antigen -10.0
PCCB propionyl CoA carboxylase, beta polypeptide -7.34791
RPS4Y1 ribosomal protein S4, Y-linked 1 -7.03664
COG2 component of oligomeric golgi complex 2 -6.84135
CCNB2 cyclin B2 -5.00826
TLR4 toll-like receptor 4 -4.93082
INTS3 integrator complex subunit 3 -4.81979
PECR peroxisomal trans-2-enoyl-CoA reductase -4.79988
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -4.7387
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 -4.60339
DCK deoxycytidine kinase -4.54079
AKAP8 A kinase (PRKA) anchor protein 8 -4.2091
GOLT1B golgi transport 1B -4.17795
C2CD5 C2 calcium-dependent domain containing 5 -4.10132
LDHD lactate dehydrogenase D -4.05224
B4GAT1 beta-1,4-glucuronyltransferase 1 -3.96107
HACD3 3-hydroxyacyl-CoA dehydratase 3 -3.93915
CHMP4B charged multivesicular body protein 4B -3.93256
CD320 CD320 molecule -3.8923
HMGA2 high mobility group AT-hook 2 -3.86421
SCAND1 SCAN domain containing 1 -3.75559
TCEAL4 transcription elongation factor A (SII)-like 4 -3.75325
SLC2A6 solute carrier family 2 (facilitated glucose transporter), member 6 -3.71993
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma -3.56424
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) -3.49033
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -3.46918
ERBB2 erb-b2 receptor tyrosine kinase 2 -3.3805
PAFAH1B3 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) -3.36932
CCDC86 coiled-coil domain containing 86 -3.29565
FGFR4 fibroblast growth factor receptor 4 -3.24467
SPAG4 sperm associated antigen 4 -3.20839
PGM1 phosphoglucomutase 1 -3.20035
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase -3.15607
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -3.14353
TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) -3.03668
IARS2 isoleucyl-tRNA synthetase 2, mitochondrial -3.03437
TLCD3A TLC domain containing 3A -3.02924
FBXL12 F-box and leucine-rich repeat protein 12 -3.0219
DERA deoxyribose-phosphate aldolase (putative) -3.00302
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -2.96742
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -2.93043
ETFB electron-transfer-flavoprotein, beta polypeptide -2.92327
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase -2.90327
HYOU1 hypoxia up-regulated 1 -2.90147
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 -2.87754
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 -2.85323
TOP2A topoisomerase (DNA) II alpha 170kDa -2.82957
PLEKHJ1 pleckstrin homology domain containing, family J member 1 -2.82103
BLMH bleomycin hydrolase -2.81459
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast) -2.75941
MYLK myosin light chain kinase -2.73086
DUSP6 dual specificity phosphatase 6 -2.7281
AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) -2.71421
STK25 serine/threonine kinase 25 -2.71061
ACAA1 acetyl-CoA acyltransferase 1 -2.69871
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) -2.67695
PRPF4 pre-mRNA processing factor 4 -2.66655
NSDHL NAD(P) dependent steroid dehydrogenase-like -2.5858
DYNC2I1 dynein 2 intermediate chain 1 -2.56739
CDK4 cyclin-dependent kinase 4 -2.5593
PSRC1 proline/serine-rich coiled-coil 1 -2.53806
MAPK13 mitogen-activated protein kinase 13 -2.48557
KANK1 KN motif and ankyrin repeat domains 1 -2.4645
GNAS GNAS complex locus -2.45753
SPTAN1 spectrin, alpha, non-erythrocytic 1 -2.42661
ENOPH1 enolase-phosphatase 1 -2.41835
NISCH nischarin -2.3947
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) -2.35061
ARHGDIB Rho GDP dissociation inhibitor (GDI) beta -2.34135
MRPS16 mitochondrial ribosomal protein S16 -2.3295
MRTO4 mRNA turnover 4 homolog (S. cerevisiae) -2.32849
NNT nicotinamide nucleotide transhydrogenase -2.32845
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 -2.32118
RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase -2.31198
LYZ lysozyme -2.2833
MST1R macrophage stimulating 1 receptor -2.28127
TSPAN4 tetraspanin 4 -2.27649
DIXDC1 DIX domain containing 1 -2.27632
ERBB3 erb-b2 receptor tyrosine kinase 3 -2.25589
DMAC2L distal membrane arm assembly component 2 like -2.24679
MANSC1 MANSC domain containing 1 -2.23755
CRTAP cartilage associated protein -2.22498
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa -2.20182
INSIG2 insulin induced gene 2 -2.17833
RAB11A RAB11A, member RAS oncogene family -2.14176
PDZK1 PDZ domain containing 1 -2.13693
MINDY1 MINDY lysine 48 deubiquitinase 1 -2.13154
ZDHHC6 zinc finger, DHHC-type containing 6 -2.1298
NXT1 nuclear transport factor 2-like export factor 1 -2.10621
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -2.10557
PYCR1 pyrroline-5-carboxylate reductase 1 -2.09063
STXBP2 syntaxin binding protein 2 -2.07717
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) -2.07581
CD151 CD151 molecule (Raph blood group) -2.06371
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -2.04002
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -2.03118
GET1 guided entry of tail-anchored proteins factor 1 -2.02536
NDUFS5 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) -2.02027